RNA–Protein interactions for RNA: ENST00000641307.1

GYPA-213, Transcript of glycophorin A (MNS blood group), humanhuman

Gene GYPA, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-213ENST00000641307 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
GYPA-213ENST00000641307 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
GYPA-213ENST00000641307 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
GYPA-213ENST00000641307 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
GYPA-213ENST00000641307 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
GYPA-213ENST00000641307 FOXD1Q16676 465 aa18.06■□□□□ 0.48
GYPA-213ENST00000641307 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
GYPA-213ENST00000641307 ADRA2BP18089 450 aa17.29■□□□□ 0.36
GYPA-213ENST00000641307 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
GYPA-213ENST00000641307 MSH5O43196 834 aa16.67■□□□□ 0.26
GYPA-213ENST00000641307 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
GYPA-213ENST00000641307 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
GYPA-213ENST00000641307 MAPK8IP2Q13387 824 aaPredicted RBP15.7■□□□□ 0.1
GYPA-213ENST00000641307 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
GYPA-213ENST00000641307 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
GYPA-213ENST00000641307 KCNA4P22459 653 aa15.51■□□□□ 0.07
GYPA-213ENST00000641307 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
GYPA-213ENST00000641307 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
GYPA-213ENST00000641307 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
GYPA-213ENST00000641307 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
GYPA-213ENST00000641307 HOXD11P31277 338 aaPredicted RBP15.23■□□□□ 0.03
GYPA-213ENST00000641307 DNAJC5BQ9UF47 199 aa15.01□□□□□ -0.01
GYPA-213ENST00000641307 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
GYPA-213ENST00000641307 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
GYPA-213ENST00000641307 SLC4A2P04920 1241 aa14.48□□□□□ -0.09
GYPA-213ENST00000641307 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.39□□□□□ -0.11
GYPA-213ENST00000641307 ZBTB22O15209 634 aa14.31□□□□□ -0.12
GYPA-213ENST00000641307 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
GYPA-213ENST00000641307 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
GYPA-213ENST00000641307 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
GYPA-213ENST00000641307 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
GYPA-213ENST00000641307 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
GYPA-213ENST00000641307 MYCNP04198 464 aaPredicted RBP14.13□□□□□ -0.15
GYPA-213ENST00000641307 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
GYPA-213ENST00000641307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
GYPA-213ENST00000641307 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
GYPA-213ENST00000641307 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
GYPA-213ENST00000641307 CACNB1Q02641 598 aaPredicted RBP13.88□□□□□ -0.19
GYPA-213ENST00000641307 APLP2Q06481 763 aa13.86□□□□□ -0.19
GYPA-213ENST00000641307 ATXN8OSP0DMR3 200 aa13.85□□□□□ -0.19
GYPA-213ENST00000641307 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
GYPA-213ENST00000641307 ATF5Q9Y2D1 282 aaPredicted RBP13.75□□□□□ -0.21
GYPA-213ENST00000641307 CAPN15O75808 1086 aa13.71□□□□□ -0.21
GYPA-213ENST00000641307 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
GYPA-213ENST00000641307 TRHP20396 242 aaPredicted RBP13.62□□□□□ -0.23
GYPA-213ENST00000641307 DSG3P32926 999 aa13.58□□□□□ -0.24
GYPA-213ENST00000641307 ABCB7O75027 752 aa13.44□□□□□ -0.26
GYPA-213ENST00000641307 POLA2Q14181 598 aa13.44□□□□□ -0.26
GYPA-213ENST00000641307 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
GYPA-213ENST00000641307 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
GYPA-213ENST00000641307 FBLN2P98095 1184 aa13.13□□□□□ -0.31
GYPA-213ENST00000641307 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
GYPA-213ENST00000641307 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
GYPA-213ENST00000641307 SPDYE2BA6NHP3 402 aa12.9□□□□□ -0.34
GYPA-213ENST00000641307 SPDYE6P0CI01 402 aa12.9□□□□□ -0.34
GYPA-213ENST00000641307 SPDYE2Q495Y8 402 aa12.9□□□□□ -0.34
GYPA-213ENST00000641307 SSUH2Q9Y2M2 353 aa12.83□□□□□ -0.36
GYPA-213ENST00000641307 SPDYE4A6NLX3 237 aa12.81□□□□□ -0.36
GYPA-213ENST00000641307 ZNF692Q9BU19 519 aaPredicted RBP12.79□□□□□ -0.36
GYPA-213ENST00000641307 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
GYPA-213ENST00000641307 FKBP8Q14318 412 aa12.74□□□□□ -0.37
GYPA-213ENST00000641307 PROM2Q8N271 834 aa12.71□□□□□ -0.37
GYPA-213ENST00000641307 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
GYPA-213ENST00000641307 PABPN1Q86U42 306 aaKnown RBP eCLIP12.62□□□□□ -0.39
GYPA-213ENST00000641307 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
GYPA-213ENST00000641307 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
GYPA-213ENST00000641307 STAG3Q9UJ98 1225 aa12.43□□□□□ -0.42
GYPA-213ENST00000641307 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
GYPA-213ENST00000641307 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
GYPA-213ENST00000641307 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
GYPA-213ENST00000641307 PRR29P0C7W0 189 aa12.3□□□□□ -0.44
GYPA-213ENST00000641307 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
GYPA-213ENST00000641307 PIP4P2Q8N4L2 257 aa12.24□□□□□ -0.45
GYPA-213ENST00000641307 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
GYPA-213ENST00000641307 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
GYPA-213ENST00000641307 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
GYPA-213ENST00000641307 CHADLQ6NUI6 762 aa12.11□□□□□ -0.47
GYPA-213ENST00000641307 MIER1Q8N108 512 aa12.11□□□□□ -0.47
GYPA-213ENST00000641307 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
GYPA-213ENST00000641307 PLCD3Q8N3E9 789 aa12.07□□□□□ -0.48
GYPA-213ENST00000641307 POTEHQ6S545 545 aa12.06□□□□□ -0.48
GYPA-213ENST00000641307 FARP1Q9Y4F1 1045 aaPredicted RBP12.04□□□□□ -0.48
GYPA-213ENST00000641307 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
GYPA-213ENST00000641307 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
GYPA-213ENST00000641307 NISCHQ9Y2I1 1504 aa12.01□□□□□ -0.49
GYPA-213ENST00000641307 ZBTB47Q9UFB7 747 aaPredicted RBP12□□□□□ -0.49
GYPA-213ENST00000641307 NPM1P06748 294 aaKnown RBP eCLIP11.94□□□□□ -0.5
GYPA-213ENST00000641307 NUBP1P53384 320 aa11.89□□□□□ -0.51
GYPA-213ENST00000641307 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
GYPA-213ENST00000641307 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
GYPA-213ENST00000641307 SPOCK2Q92563 424 aa11.86□□□□□ -0.51
GYPA-213ENST00000641307 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
GYPA-213ENST00000641307 HAX1O00165 279 aa11.79□□□□□ -0.52
GYPA-213ENST00000641307 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
GYPA-213ENST00000641307 EVX2Q03828 476 aa11.76□□□□□ -0.53
GYPA-213ENST00000641307 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
GYPA-213ENST00000641307 PAK3O75914 559 aaPredicted RBP11.71□□□□□ -0.53
GYPA-213ENST00000641307 TSPYL2Q9H2G4 693 aaPredicted RBP11.71□□□□□ -0.53
GYPA-213ENST00000641307 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
GYPA-213ENST00000641307 GSE1Q14687 1217 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms