RNA–Protein interactions for RNA: ENST00000640150.1

GCSH-210, Transcript of glycine cleavage system protein H, humanhuman

TSL 5

Gene GCSH, Length 840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-210ENST00000640150 AEBP2Q6ZN18 517 aaPredicted RBP36.93■■■■□ 3.5
GCSH-210ENST00000640150 CHIC1Q5VXU3 224 aa35.31■■■■□ 3.24
GCSH-210ENST00000640150 SENP3Q9H4L4 574 aaPredicted RBP31.44■■■□□ 2.62
GCSH-210ENST00000640150 PHF23Q9BUL5 403 aaPredicted RBP31.1■■■□□ 2.57
GCSH-210ENST00000640150 FOXD1Q16676 465 aa29.29■■■□□ 2.28
GCSH-210ENST00000640150 PLPPR3Q6T4P5 718 aa28.32■■■□□ 2.12
GCSH-210ENST00000640150 PPP6R1Q9UPN7 881 aa27.61■■■□□ 2.01
GCSH-210ENST00000640150 ADRA2BP18089 450 aa27.52■■■□□ 2
GCSH-210ENST00000640150 PIAS4Q8N2W9 510 aaPredicted RBP27.39■■□□□ 1.98
GCSH-210ENST00000640150 MSH5O43196 834 aa27.29■■□□□ 1.96
GCSH-210ENST00000640150 POTEDQ86YR6 584 aa26.21■■□□□ 1.79
GCSH-210ENST00000640150 MAPK8IP2Q13387 824 aaPredicted RBP25.21■■□□□ 1.63
GCSH-210ENST00000640150 SCAF1Q9H7N4 1312 aaKnown RBP25.16■■□□□ 1.62
GCSH-210ENST00000640150 DMRT2Q9Y5R5 561 aa24.99■■□□□ 1.59
GCSH-210ENST00000640150 PPP4R3CPQ6ZMV5 832 aa24.86■■□□□ 1.57
GCSH-210ENST00000640150 CNKSR2Q8WXI2 1034 aa24.34■■□□□ 1.49
GCSH-210ENST00000640150 HOXD11P31277 338 aaPredicted RBP24.18■■□□□ 1.46
GCSH-210ENST00000640150 RNF216Q9NWF9 866 aaPredicted RBP24.06■■□□□ 1.44
GCSH-210ENST00000640150 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
GCSH-210ENST00000640150 DCAF8L1A6NGE4 600 aa23.88■■□□□ 1.41
GCSH-210ENST00000640150 NPM3O75607 178 aaKnown RBP23.64■■□□□ 1.37
GCSH-210ENST00000640150 KCNA4P22459 653 aa23.41■■□□□ 1.34
GCSH-210ENST00000640150 RNF39Q9H2S5 420 aa23.33■■□□□ 1.33
GCSH-210ENST00000640150 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
GCSH-210ENST00000640150 CACNB1Q02641 598 aaPredicted RBP23.25■■□□□ 1.31
GCSH-210ENST00000640150 C1QBPQ07021 282 aaKnown RBP23.01■■□□□ 1.27
GCSH-210ENST00000640150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.27
GCSH-210ENST00000640150 U3KPZ7 1027 aaPredicted RBP22.56■■□□□ 1.2
GCSH-210ENST00000640150 SLC4A2P04920 1241 aa22.53■■□□□ 1.2
GCSH-210ENST00000640150 SPINK5Q9NQ38 1064 aaPredicted RBP22.16■■□□□ 1.14
GCSH-210ENST00000640150 SLC4A1APQ9BWU0 796 aaKnown RBP22.13■■□□□ 1.13
GCSH-210ENST00000640150 CAPN15O75808 1086 aa22.08■■□□□ 1.13
GCSH-210ENST00000640150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
GCSH-210ENST00000640150 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
GCSH-210ENST00000640150 DSG3P32926 999 aa21.94■■□□□ 1.1
GCSH-210ENST00000640150 APLP2Q06481 763 aa21.93■■□□□ 1.1
GCSH-210ENST00000640150 SAMD1Q6SPF0 538 aaPredicted RBP21.89■■□□□ 1.09
GCSH-210ENST00000640150 MYCNP04198 464 aaPredicted RBP21.83■■□□□ 1.09
GCSH-210ENST00000640150 TRHP20396 242 aaPredicted RBP21.78■■□□□ 1.08
GCSH-210ENST00000640150 ZNF219Q9P2Y4 722 aaPredicted RBP21.76■■□□□ 1.07
GCSH-210ENST00000640150 FOXD4L1Q9NU39 408 aa21.75■■□□□ 1.07
GCSH-210ENST00000640150 ABCB7O75027 752 aa21.58■■□□□ 1.05
GCSH-210ENST00000640150 ZBTB22O15209 634 aa21.53■■□□□ 1.04
GCSH-210ENST00000640150 ATF5Q9Y2D1 282 aaPredicted RBP21.34■■□□□ 1.01
GCSH-210ENST00000640150 POLA2Q14181 598 aa21.3■■□□□ 1
GCSH-210ENST00000640150 ATXN8OSP0DMR3 200 aa21.1■□□□□ 0.97
GCSH-210ENST00000640150 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
GCSH-210ENST00000640150 ZBTB12Q9Y330 459 aaPredicted RBP20.86■□□□□ 0.93
GCSH-210ENST00000640150 CSRNP3Q8WYN3 585 aa20.79■□□□□ 0.92
GCSH-210ENST00000640150 POTEHQ6S545 545 aa20.58■□□□□ 0.89
GCSH-210ENST00000640150 EHMT2Q96KQ7 1210 aa20.58■□□□□ 0.89
GCSH-210ENST00000640150 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
GCSH-210ENST00000640150 AKT1S1Q96B36 256 aa20.49■□□□□ 0.87
GCSH-210ENST00000640150 FBLN2P98095 1184 aa20.45■□□□□ 0.86
GCSH-210ENST00000640150 MKRN4PQ13434 485 aaPredicted RBP20.38■□□□□ 0.85
GCSH-210ENST00000640150 CHRDL2Q6WN34 429 aa20.34■□□□□ 0.85
GCSH-210ENST00000640150 REM2Q8IYK8 340 aaPredicted RBP20.31■□□□□ 0.84
GCSH-210ENST00000640150 SPDYE2BA6NHP3 402 aa20.26■□□□□ 0.83
GCSH-210ENST00000640150 SPDYE6P0CI01 402 aa20.26■□□□□ 0.83
GCSH-210ENST00000640150 SPDYE2Q495Y8 402 aa20.26■□□□□ 0.83
GCSH-210ENST00000640150 PITPNM1O00562 1244 aa20.06■□□□□ 0.8
GCSH-210ENST00000640150 ZNF692Q9BU19 519 aaPredicted RBP20.05■□□□□ 0.8
GCSH-210ENST00000640150 SSUH2Q9Y2M2 353 aa20.02■□□□□ 0.8
GCSH-210ENST00000640150 PIP4P2Q8N4L2 257 aa19.92■□□□□ 0.78
GCSH-210ENST00000640150 FXR2P51116 673 aaKnown RBP eCLIP19.87■□□□□ 0.77
GCSH-210ENST00000640150 SPDYE1Q8NFV5 336 aaPredicted RBP19.83■□□□□ 0.77
GCSH-210ENST00000640150 PABPN1Q86U42 306 aaKnown RBP eCLIP19.76■□□□□ 0.75
GCSH-210ENST00000640150 CLEC11AQ9Y240 323 aa19.75■□□□□ 0.75
GCSH-210ENST00000640150 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
GCSH-210ENST00000640150 SPDYE4A6NLX3 237 aa19.52■□□□□ 0.72
GCSH-210ENST00000640150 PRR29P0C7W0 189 aa19.5■□□□□ 0.71
GCSH-210ENST00000640150 HAX1O00165 279 aa19.48■□□□□ 0.71
GCSH-210ENST00000640150 SP7Q8TDD2 431 aaPredicted RBP19.41■□□□□ 0.7
GCSH-210ENST00000640150 CHADLQ6NUI6 762 aa19.37■□□□□ 0.69
GCSH-210ENST00000640150 EVX2Q03828 476 aa19.31■□□□□ 0.68
GCSH-210ENST00000640150 STAG3Q9UJ98 1225 aa19.28■□□□□ 0.68
GCSH-210ENST00000640150 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
GCSH-210ENST00000640150 PROM2Q8N271 834 aa19.14■□□□□ 0.65
GCSH-210ENST00000640150 FARP1Q9Y4F1 1045 aaPredicted RBP19.14■□□□□ 0.65
GCSH-210ENST00000640150 CREBZFQ9NS37 354 aa19.1■□□□□ 0.65
GCSH-210ENST00000640150 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
GCSH-210ENST00000640150 GABBR2O75899 941 aa18.86■□□□□ 0.61
GCSH-210ENST00000640150 MNX1P50219 401 aaPredicted RBP18.81■□□□□ 0.6
GCSH-210ENST00000640150 FKBP8Q14318 412 aa18.79■□□□□ 0.6
GCSH-210ENST00000640150 NPM1P06748 294 aaKnown RBP eCLIP18.73■□□□□ 0.59
GCSH-210ENST00000640150 ZRANB1Q9UGI0 708 aa18.71■□□□□ 0.59
GCSH-210ENST00000640150 CLCN6P51797 869 aa18.68■□□□□ 0.58
GCSH-210ENST00000640150 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
GCSH-210ENST00000640150 MIER1Q8N108 512 aa18.6■□□□□ 0.57
GCSH-210ENST00000640150 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
GCSH-210ENST00000640150 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
GCSH-210ENST00000640150 POTEIP0CG38 1075 aa18.48■□□□□ 0.55
GCSH-210ENST00000640150 PHF12Q96QT6 1004 aa18.47■□□□□ 0.55
GCSH-210ENST00000640150 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
GCSH-210ENST00000640150 GALR2O43603 387 aaPredicted RBP18.41■□□□□ 0.54
GCSH-210ENST00000640150 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
GCSH-210ENST00000640150 DCBLD2Q96PD2 775 aa18.38■□□□□ 0.53
GCSH-210ENST00000640150 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
GCSH-210ENST00000640150 CCDC61Q9Y6R9 512 aa18.32■□□□□ 0.52
GCSH-210ENST00000640150 RASEFQ8IZ41 740 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms