RNA–Protein interactions for RNA: ENST00000639680.1

KCNA1-204, Transcript of potassium voltage-gated channel subfamily A member 1, humanhuman

TSL 5

Gene KCNA1, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1-204ENST00000639680 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
KCNA1-204ENST00000639680 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
KCNA1-204ENST00000639680 SENP3Q9H4L4 574 aaPredicted RBP25.46■■□□□ 1.67
KCNA1-204ENST00000639680 PHF23Q9BUL5 403 aaPredicted RBP25.14■■□□□ 1.62
KCNA1-204ENST00000639680 FOXD1Q16676 465 aa23.69■■□□□ 1.38
KCNA1-204ENST00000639680 PLPPR3Q6T4P5 718 aa22.81■■□□□ 1.24
KCNA1-204ENST00000639680 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
KCNA1-204ENST00000639680 ADRA2BP18089 450 aa22.17■■□□□ 1.14
KCNA1-204ENST00000639680 PIAS4Q8N2W9 510 aaPredicted RBP22.17■■□□□ 1.14
KCNA1-204ENST00000639680 MSH5O43196 834 aa22.16■■□□□ 1.14
KCNA1-204ENST00000639680 POTEDQ86YR6 584 aa21.41■■□□□ 1.02
KCNA1-204ENST00000639680 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
KCNA1-204ENST00000639680 MAPK8IP2Q13387 824 aaPredicted RBP20.32■□□□□ 0.84
KCNA1-204ENST00000639680 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
KCNA1-204ENST00000639680 PPP4R3CPQ6ZMV5 832 aa19.99■□□□□ 0.79
KCNA1-204ENST00000639680 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
KCNA1-204ENST00000639680 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
KCNA1-204ENST00000639680 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
KCNA1-204ENST00000639680 DCAF8L1A6NGE4 600 aa19.36■□□□□ 0.69
KCNA1-204ENST00000639680 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
KCNA1-204ENST00000639680 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
KCNA1-204ENST00000639680 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
KCNA1-204ENST00000639680 RNF39Q9H2S5 420 aa18.9■□□□□ 0.62
KCNA1-204ENST00000639680 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
KCNA1-204ENST00000639680 KCNA4P22459 653 aa18.7■□□□□ 0.58
KCNA1-204ENST00000639680 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
KCNA1-204ENST00000639680 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
KCNA1-204ENST00000639680 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
KCNA1-204ENST00000639680 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
KCNA1-204ENST00000639680 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
KCNA1-204ENST00000639680 CAPN15O75808 1086 aa17.87■□□□□ 0.45
KCNA1-204ENST00000639680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
KCNA1-204ENST00000639680 HNRNPUL2Q1KMD3 747 aaKnown RBP17.76■□□□□ 0.43
KCNA1-204ENST00000639680 APLP2Q06481 763 aa17.75■□□□□ 0.43
KCNA1-204ENST00000639680 DSG3P32926 999 aa17.73■□□□□ 0.43
KCNA1-204ENST00000639680 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
KCNA1-204ENST00000639680 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
KCNA1-204ENST00000639680 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
KCNA1-204ENST00000639680 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
KCNA1-204ENST00000639680 MYCNP04198 464 aaPredicted RBP17.56■□□□□ 0.4
KCNA1-204ENST00000639680 ABCB7O75027 752 aa17.46■□□□□ 0.39
KCNA1-204ENST00000639680 FOXD4L1Q9NU39 408 aa17.44■□□□□ 0.38
KCNA1-204ENST00000639680 ZBTB22O15209 634 aa17.18■□□□□ 0.34
KCNA1-204ENST00000639680 POLA2Q14181 598 aa17.17■□□□□ 0.34
KCNA1-204ENST00000639680 ATF5Q9Y2D1 282 aaPredicted RBP17.12■□□□□ 0.33
KCNA1-204ENST00000639680 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
KCNA1-204ENST00000639680 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
KCNA1-204ENST00000639680 ZBTB12Q9Y330 459 aaPredicted RBP16.85■□□□□ 0.29
KCNA1-204ENST00000639680 POTEHQ6S545 545 aa16.8■□□□□ 0.28
KCNA1-204ENST00000639680 OSCARQ8IYS5 282 aa16.6■□□□□ 0.25
KCNA1-204ENST00000639680 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
KCNA1-204ENST00000639680 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
KCNA1-204ENST00000639680 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
KCNA1-204ENST00000639680 FBLN2P98095 1184 aa16.49■□□□□ 0.23
KCNA1-204ENST00000639680 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
KCNA1-204ENST00000639680 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
KCNA1-204ENST00000639680 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
KCNA1-204ENST00000639680 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
KCNA1-204ENST00000639680 MKRN4PQ13434 485 aaPredicted RBP16.34■□□□□ 0.21
KCNA1-204ENST00000639680 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
KCNA1-204ENST00000639680 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
KCNA1-204ENST00000639680 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
KCNA1-204ENST00000639680 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
KCNA1-204ENST00000639680 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
KCNA1-204ENST00000639680 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
KCNA1-204ENST00000639680 SPDYE1Q8NFV5 336 aaPredicted RBP16.02■□□□□ 0.16
KCNA1-204ENST00000639680 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
KCNA1-204ENST00000639680 PABPN1Q86U42 306 aaKnown RBP eCLIP15.91■□□□□ 0.14
KCNA1-204ENST00000639680 HAX1O00165 279 aa15.83■□□□□ 0.12
KCNA1-204ENST00000639680 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
KCNA1-204ENST00000639680 SP7Q8TDD2 431 aaPredicted RBP15.81■□□□□ 0.12
KCNA1-204ENST00000639680 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
KCNA1-204ENST00000639680 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
KCNA1-204ENST00000639680 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
KCNA1-204ENST00000639680 EVX2Q03828 476 aa15.61■□□□□ 0.09
KCNA1-204ENST00000639680 C19orf67A6NJJ6 358 aa15.55■□□□□ 0.08
KCNA1-204ENST00000639680 STAG3Q9UJ98 1225 aa15.53■□□□□ 0.08
KCNA1-204ENST00000639680 FARP1Q9Y4F1 1045 aaPredicted RBP15.44■□□□□ 0.06
KCNA1-204ENST00000639680 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
KCNA1-204ENST00000639680 CD44P16070 742 aaKnown RBP15.32■□□□□ 0.04
KCNA1-204ENST00000639680 GABBR2O75899 941 aa15.29■□□□□ 0.04
KCNA1-204ENST00000639680 PROM2Q8N271 834 aa15.28■□□□□ 0.04
KCNA1-204ENST00000639680 CLCN6P51797 869 aa15.13■□□□□ 0.01
KCNA1-204ENST00000639680 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
KCNA1-204ENST00000639680 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
KCNA1-204ENST00000639680 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
KCNA1-204ENST00000639680 ZNF579Q8NAF0 562 aaKnown RBP15.09■□□□□ 0.01
KCNA1-204ENST00000639680 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
KCNA1-204ENST00000639680 FKBP8Q14318 412 aa14.98□□□□□ -0.01
KCNA1-204ENST00000639680 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
KCNA1-204ENST00000639680 PLEKHG5O94827 1062 aa14.93□□□□□ -0.02
KCNA1-204ENST00000639680 MIER1Q8N108 512 aa14.92□□□□□ -0.02
KCNA1-204ENST00000639680 DCBLD2Q96PD2 775 aa14.92□□□□□ -0.02
KCNA1-204ENST00000639680 PHF12Q96QT6 1004 aa14.91□□□□□ -0.02
KCNA1-204ENST00000639680 GALR2O43603 387 aaPredicted RBP14.89□□□□□ -0.03
KCNA1-204ENST00000639680 LHX8Q68G74 356 aa14.84□□□□□ -0.03
KCNA1-204ENST00000639680 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
KCNA1-204ENST00000639680 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
KCNA1-204ENST00000639680 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
KCNA1-204ENST00000639680 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms