RNA–Protein interactions for RNA: ENST00000639137.1

GCSH-207, Transcript of glycine cleavage system protein H, humanhuman

TSL 1 (best)

Gene GCSH, Length 1,129 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-207ENST00000639137 AEBP2Q6ZN18 517 aaPredicted RBP31.05■■■□□ 2.56
GCSH-207ENST00000639137 CHIC1Q5VXU3 224 aa29.75■■■□□ 2.35
GCSH-207ENST00000639137 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
GCSH-207ENST00000639137 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
GCSH-207ENST00000639137 FOXD1Q16676 465 aa24.62■■□□□ 1.53
GCSH-207ENST00000639137 PLPPR3Q6T4P5 718 aa23.91■■□□□ 1.42
GCSH-207ENST00000639137 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
GCSH-207ENST00000639137 ADRA2BP18089 450 aa23.2■■□□□ 1.3
GCSH-207ENST00000639137 PIAS4Q8N2W9 510 aaPredicted RBP23.1■■□□□ 1.29
GCSH-207ENST00000639137 MSH5O43196 834 aa22.93■■□□□ 1.26
GCSH-207ENST00000639137 POTEDQ86YR6 584 aa21.92■■□□□ 1.1
GCSH-207ENST00000639137 MAPK8IP2Q13387 824 aaPredicted RBP21.22■□□□□ 0.99
GCSH-207ENST00000639137 SCAF1Q9H7N4 1312 aaKnown RBP21.2■□□□□ 0.98
GCSH-207ENST00000639137 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
GCSH-207ENST00000639137 PPP4R3CPQ6ZMV5 832 aa20.99■□□□□ 0.95
GCSH-207ENST00000639137 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
GCSH-207ENST00000639137 HOXD11P31277 338 aaPredicted RBP20.32■□□□□ 0.84
GCSH-207ENST00000639137 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
GCSH-207ENST00000639137 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
GCSH-207ENST00000639137 DCAF8L1A6NGE4 600 aa20.21■□□□□ 0.83
GCSH-207ENST00000639137 NPM3O75607 178 aaKnown RBP19.99■□□□□ 0.79
GCSH-207ENST00000639137 KCNA4P22459 653 aa19.86■□□□□ 0.77
GCSH-207ENST00000639137 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
GCSH-207ENST00000639137 CACNB1Q02641 598 aaPredicted RBP19.54■□□□□ 0.72
GCSH-207ENST00000639137 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
GCSH-207ENST00000639137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.43■□□□□ 0.7
GCSH-207ENST00000639137 C1QBPQ07021 282 aaKnown RBP19.32■□□□□ 0.68
GCSH-207ENST00000639137 U3KPZ7 1027 aaPredicted RBP19.03■□□□□ 0.64
GCSH-207ENST00000639137 SLC4A2P04920 1241 aa19■□□□□ 0.63
GCSH-207ENST00000639137 SLC4A1APQ9BWU0 796 aaKnown RBP18.81■□□□□ 0.6
GCSH-207ENST00000639137 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
GCSH-207ENST00000639137 CAPN15O75808 1086 aa18.66■□□□□ 0.58
GCSH-207ENST00000639137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
GCSH-207ENST00000639137 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
GCSH-207ENST00000639137 APLP2Q06481 763 aa18.52■□□□□ 0.56
GCSH-207ENST00000639137 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
GCSH-207ENST00000639137 MYCNP04198 464 aaPredicted RBP18.48■□□□□ 0.55
GCSH-207ENST00000639137 DSG3P32926 999 aa18.44■□□□□ 0.54
GCSH-207ENST00000639137 FOXD4L1Q9NU39 408 aa18.44■□□□□ 0.54
GCSH-207ENST00000639137 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
GCSH-207ENST00000639137 ZNF219Q9P2Y4 722 aaPredicted RBP18.38■□□□□ 0.53
GCSH-207ENST00000639137 ZBTB22O15209 634 aa18.26■□□□□ 0.51
GCSH-207ENST00000639137 ABCB7O75027 752 aa18.26■□□□□ 0.51
GCSH-207ENST00000639137 ATF5Q9Y2D1 282 aaPredicted RBP18.04■□□□□ 0.48
GCSH-207ENST00000639137 POLA2Q14181 598 aa17.97■□□□□ 0.47
GCSH-207ENST00000639137 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
GCSH-207ENST00000639137 CSRNP3Q8WYN3 585 aa17.66■□□□□ 0.42
GCSH-207ENST00000639137 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
GCSH-207ENST00000639137 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
GCSH-207ENST00000639137 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
GCSH-207ENST00000639137 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
GCSH-207ENST00000639137 FBLN2P98095 1184 aa17.33■□□□□ 0.36
GCSH-207ENST00000639137 POTEHQ6S545 545 aa17.24■□□□□ 0.35
GCSH-207ENST00000639137 AKT1S1Q96B36 256 aa17.24■□□□□ 0.35
GCSH-207ENST00000639137 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
GCSH-207ENST00000639137 CHRDL2Q6WN34 429 aa17.11■□□□□ 0.33
GCSH-207ENST00000639137 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
GCSH-207ENST00000639137 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
GCSH-207ENST00000639137 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
GCSH-207ENST00000639137 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
GCSH-207ENST00000639137 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
GCSH-207ENST00000639137 PITPNM1O00562 1244 aa16.92■□□□□ 0.3
GCSH-207ENST00000639137 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
GCSH-207ENST00000639137 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
GCSH-207ENST00000639137 SPDYE1Q8NFV5 336 aaPredicted RBP16.74■□□□□ 0.27
GCSH-207ENST00000639137 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
GCSH-207ENST00000639137 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
GCSH-207ENST00000639137 FXR2P51116 673 aaKnown RBP eCLIP16.68■□□□□ 0.26
GCSH-207ENST00000639137 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
GCSH-207ENST00000639137 PRKAR2AP13861 404 aaKnown RBP16.49■□□□□ 0.23
GCSH-207ENST00000639137 PRR29P0C7W0 189 aa16.47■□□□□ 0.23
GCSH-207ENST00000639137 HAX1O00165 279 aa16.4■□□□□ 0.22
GCSH-207ENST00000639137 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
GCSH-207ENST00000639137 STAG3Q9UJ98 1225 aa16.3■□□□□ 0.2
GCSH-207ENST00000639137 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
GCSH-207ENST00000639137 EVX2Q03828 476 aa16.2■□□□□ 0.18
GCSH-207ENST00000639137 PROM2Q8N271 834 aa16.15■□□□□ 0.18
GCSH-207ENST00000639137 C19orf67A6NJJ6 358 aa16.14■□□□□ 0.17
GCSH-207ENST00000639137 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
GCSH-207ENST00000639137 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
GCSH-207ENST00000639137 FKBP8Q14318 412 aa16.04■□□□□ 0.16
GCSH-207ENST00000639137 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
GCSH-207ENST00000639137 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
GCSH-207ENST00000639137 GABBR2O75899 941 aa15.85■□□□□ 0.13
GCSH-207ENST00000639137 NPM1P06748 294 aaKnown RBP eCLIP15.83■□□□□ 0.12
GCSH-207ENST00000639137 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
GCSH-207ENST00000639137 MIER1Q8N108 512 aa15.78■□□□□ 0.12
GCSH-207ENST00000639137 PLEKHG5O94827 1062 aa15.75■□□□□ 0.11
GCSH-207ENST00000639137 PAK3O75914 559 aaPredicted RBP15.74■□□□□ 0.11
GCSH-207ENST00000639137 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
GCSH-207ENST00000639137 PLCD3Q8N3E9 789 aa15.7■□□□□ 0.1
GCSH-207ENST00000639137 CLCN6P51797 869 aa15.65■□□□□ 0.1
GCSH-207ENST00000639137 PHF12Q96QT6 1004 aa15.62■□□□□ 0.09
GCSH-207ENST00000639137 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
GCSH-207ENST00000639137 TSPYL2Q9H2G4 693 aaPredicted RBP15.59■□□□□ 0.09
GCSH-207ENST00000639137 GALR2O43603 387 aaPredicted RBP15.54■□□□□ 0.08
GCSH-207ENST00000639137 ZBTB47Q9UFB7 747 aaPredicted RBP15.54■□□□□ 0.08
GCSH-207ENST00000639137 POTEIP0CG38 1075 aa15.51■□□□□ 0.07
GCSH-207ENST00000639137 DCBLD2Q96PD2 775 aa15.51■□□□□ 0.07
GCSH-207ENST00000639137 RASEFQ8IZ41 740 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms