RNA–Protein interactions for RNA: ENST00000638529.1

MS4A4E-208, Transcript of membrane spanning 4-domains A4E, humanhuman

TSL 1 (best)

Gene MS4A4E, Length 508 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4E-208ENST00000638529 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
MS4A4E-208ENST00000638529 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
MS4A4E-208ENST00000638529 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
MS4A4E-208ENST00000638529 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
MS4A4E-208ENST00000638529 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
MS4A4E-208ENST00000638529 FOXD1Q16676 465 aa14.23□□□□□ -0.13
MS4A4E-208ENST00000638529 ADRA2BP18089 450 aa13.9□□□□□ -0.18
MS4A4E-208ENST00000638529 PPP6R1Q9UPN7 881 aa13.86□□□□□ -0.19
MS4A4E-208ENST00000638529 PIAS4Q8N2W9 510 aaPredicted RBP13.56□□□□□ -0.24
MS4A4E-208ENST00000638529 MSH5O43196 834 aa13.13□□□□□ -0.31
MS4A4E-208ENST00000638529 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
MS4A4E-208ENST00000638529 KCNA4P22459 653 aa13.01□□□□□ -0.33
MS4A4E-208ENST00000638529 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
MS4A4E-208ENST00000638529 SCAF1Q9H7N4 1312 aaKnown RBP12.9□□□□□ -0.34
MS4A4E-208ENST00000638529 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
MS4A4E-208ENST00000638529 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
MS4A4E-208ENST00000638529 SLC4A1APQ9BWU0 796 aaKnown RBP12.52□□□□□ -0.41
MS4A4E-208ENST00000638529 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
MS4A4E-208ENST00000638529 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
MS4A4E-208ENST00000638529 RNF216Q9NWF9 866 aaPredicted RBP12.35□□□□□ -0.43
MS4A4E-208ENST00000638529 DMRT2Q9Y5R5 561 aa12.33□□□□□ -0.44
MS4A4E-208ENST00000638529 HOXD11P31277 338 aaPredicted RBP12.18□□□□□ -0.46
MS4A4E-208ENST00000638529 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
MS4A4E-208ENST00000638529 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
MS4A4E-208ENST00000638529 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
MS4A4E-208ENST00000638529 ZBTB22O15209 634 aa11.9□□□□□ -0.5
MS4A4E-208ENST00000638529 DCAF8L1A6NGE4 600 aa11.89□□□□□ -0.51
MS4A4E-208ENST00000638529 SLC4A2P04920 1241 aa11.76□□□□□ -0.53
MS4A4E-208ENST00000638529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
MS4A4E-208ENST00000638529 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
MS4A4E-208ENST00000638529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.55□□□□□ -0.56
MS4A4E-208ENST00000638529 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
MS4A4E-208ENST00000638529 HNRNPUL2Q1KMD3 747 aaKnown RBP11.55□□□□□ -0.56
MS4A4E-208ENST00000638529 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
MS4A4E-208ENST00000638529 U3KPZ7 1027 aaPredicted RBP11.43□□□□□ -0.58
MS4A4E-208ENST00000638529 APLP2Q06481 763 aa11.4□□□□□ -0.58
MS4A4E-208ENST00000638529 POTEDQ86YR6 584 aa11.39□□□□□ -0.59
MS4A4E-208ENST00000638529 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
MS4A4E-208ENST00000638529 RNF39Q9H2S5 420 aa11.19□□□□□ -0.62
MS4A4E-208ENST00000638529 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
MS4A4E-208ENST00000638529 ZNF219Q9P2Y4 722 aaPredicted RBP11.13□□□□□ -0.63
MS4A4E-208ENST00000638529 CAPN15O75808 1086 aa11.08□□□□□ -0.64
MS4A4E-208ENST00000638529 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
MS4A4E-208ENST00000638529 SPINK5Q9NQ38 1064 aaPredicted RBP11.03□□□□□ -0.64
MS4A4E-208ENST00000638529 FKBP8Q14318 412 aa11.02□□□□□ -0.65
MS4A4E-208ENST00000638529 POLA2Q14181 598 aa10.94□□□□□ -0.66
MS4A4E-208ENST00000638529 FBLN2P98095 1184 aa10.93□□□□□ -0.66
MS4A4E-208ENST00000638529 ZBTB12Q9Y330 459 aaPredicted RBP10.86□□□□□ -0.67
MS4A4E-208ENST00000638529 ABCB7O75027 752 aa10.83□□□□□ -0.68
MS4A4E-208ENST00000638529 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
MS4A4E-208ENST00000638529 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
MS4A4E-208ENST00000638529 DSG3P32926 999 aa10.75□□□□□ -0.69
MS4A4E-208ENST00000638529 MKRN4PQ13434 485 aaPredicted RBP10.75□□□□□ -0.69
MS4A4E-208ENST00000638529 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
MS4A4E-208ENST00000638529 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
MS4A4E-208ENST00000638529 ZNF692Q9BU19 519 aaPredicted RBP10.55□□□□□ -0.72
MS4A4E-208ENST00000638529 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
MS4A4E-208ENST00000638529 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
MS4A4E-208ENST00000638529 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
MS4A4E-208ENST00000638529 OSCARQ8IYS5 282 aa10.52□□□□□ -0.73
MS4A4E-208ENST00000638529 PROM2Q8N271 834 aa10.52□□□□□ -0.73
MS4A4E-208ENST00000638529 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
MS4A4E-208ENST00000638529 SSUH2Q9Y2M2 353 aa10.41□□□□□ -0.74
MS4A4E-208ENST00000638529 VASPP50552 380 aaPredicted RBP10.39□□□□□ -0.75
MS4A4E-208ENST00000638529 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
MS4A4E-208ENST00000638529 STAG3Q9UJ98 1225 aa10.37□□□□□ -0.75
MS4A4E-208ENST00000638529 RBM42Q9BTD8 480 aaKnown RBP10.36□□□□□ -0.75
MS4A4E-208ENST00000638529 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
MS4A4E-208ENST00000638529 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
MS4A4E-208ENST00000638529 KLHL34Q8N239 644 aa10.25□□□□□ -0.77
MS4A4E-208ENST00000638529 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
MS4A4E-208ENST00000638529 MIER1Q8N108 512 aa10.23□□□□□ -0.77
MS4A4E-208ENST00000638529 AKT1S1Q96B36 256 aa10.23□□□□□ -0.77
MS4A4E-208ENST00000638529 SPDYE1Q8NFV5 336 aaPredicted RBP10.19□□□□□ -0.78
MS4A4E-208ENST00000638529 ZBTB47Q9UFB7 747 aaPredicted RBP10.17□□□□□ -0.78
MS4A4E-208ENST00000638529 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
MS4A4E-208ENST00000638529 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
MS4A4E-208ENST00000638529 REM2Q8IYK8 340 aaPredicted RBP10.1□□□□□ -0.79
MS4A4E-208ENST00000638529 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
MS4A4E-208ENST00000638529 DCAF8L2P0C7V8 631 aa10.02□□□□□ -0.81
MS4A4E-208ENST00000638529 PKD2Q13563 968 aa9.97□□□□□ -0.81
MS4A4E-208ENST00000638529 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
MS4A4E-208ENST00000638529 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
MS4A4E-208ENST00000638529 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
MS4A4E-208ENST00000638529 SLC24A1O60721 1099 aa9.95□□□□□ -0.82
MS4A4E-208ENST00000638529 GSE1Q14687 1217 aa9.91□□□□□ -0.82
MS4A4E-208ENST00000638529 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
MS4A4E-208ENST00000638529 TRIM41Q8WV44 630 aa9.9□□□□□ -0.82
MS4A4E-208ENST00000638529 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
MS4A4E-208ENST00000638529 DCAF8Q5TAQ9 597 aa9.88□□□□□ -0.83
MS4A4E-208ENST00000638529 FAM212AQ96EL1 285 aa9.85□□□□□ -0.83
MS4A4E-208ENST00000638529 NUBP1P53384 320 aa9.83□□□□□ -0.84
MS4A4E-208ENST00000638529 MNX1P50219 401 aaPredicted RBP9.79□□□□□ -0.84
MS4A4E-208ENST00000638529 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
MS4A4E-208ENST00000638529 RGL2O15211 777 aa9.77□□□□□ -0.85
MS4A4E-208ENST00000638529 CHADLQ6NUI6 762 aa9.77□□□□□ -0.85
MS4A4E-208ENST00000638529 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
MS4A4E-208ENST00000638529 PRKAR2AP13861 404 aaKnown RBP9.75□□□□□ -0.85
MS4A4E-208ENST00000638529 CHRDL2Q6WN34 429 aa9.74□□□□□ -0.85
MS4A4E-208ENST00000638529 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms