RNA–Protein interactions for RNA: ENST00000638512.1

KCNMA1-237, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2

Gene KCNMA1, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-237ENST00000638512 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
KCNMA1-237ENST00000638512 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
KCNMA1-237ENST00000638512 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
KCNMA1-237ENST00000638512 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
KCNMA1-237ENST00000638512 FOXD1Q16676 465 aa20.98■□□□□ 0.95
KCNMA1-237ENST00000638512 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
KCNMA1-237ENST00000638512 MSH5O43196 834 aa19.76■□□□□ 0.75
KCNMA1-237ENST00000638512 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
KCNMA1-237ENST00000638512 PPP6R1Q9UPN7 881 aa19.66■□□□□ 0.74
KCNMA1-237ENST00000638512 ADRA2BP18089 450 aa19.64■□□□□ 0.73
KCNMA1-237ENST00000638512 POTEDQ86YR6 584 aa18.89■□□□□ 0.61
KCNMA1-237ENST00000638512 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
KCNMA1-237ENST00000638512 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
KCNMA1-237ENST00000638512 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
KCNMA1-237ENST00000638512 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
KCNMA1-237ENST00000638512 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
KCNMA1-237ENST00000638512 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
KCNMA1-237ENST00000638512 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
KCNMA1-237ENST00000638512 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-237ENST00000638512 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
KCNMA1-237ENST00000638512 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
KCNMA1-237ENST00000638512 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
KCNMA1-237ENST00000638512 CACNB1Q02641 598 aaPredicted RBP16.79■□□□□ 0.28
KCNMA1-237ENST00000638512 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
KCNMA1-237ENST00000638512 KCNA4P22459 653 aa16.65■□□□□ 0.26
KCNMA1-237ENST00000638512 C1QBPQ07021 282 aaKnown RBP16.63■□□□□ 0.25
KCNMA1-237ENST00000638512 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
KCNMA1-237ENST00000638512 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
KCNMA1-237ENST00000638512 SLC4A2P04920 1241 aa16.04■□□□□ 0.16
KCNMA1-237ENST00000638512 APLP2Q06481 763 aa15.98■□□□□ 0.15
KCNMA1-237ENST00000638512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-237ENST00000638512 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
KCNMA1-237ENST00000638512 CAPN15O75808 1086 aa15.9■□□□□ 0.14
KCNMA1-237ENST00000638512 SAMD1Q6SPF0 538 aaPredicted RBP15.83■□□□□ 0.12
KCNMA1-237ENST00000638512 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
KCNMA1-237ENST00000638512 SPINK5Q9NQ38 1064 aaPredicted RBP15.83■□□□□ 0.12
KCNMA1-237ENST00000638512 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
KCNMA1-237ENST00000638512 DSG3P32926 999 aa15.74■□□□□ 0.11
KCNMA1-237ENST00000638512 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
KCNMA1-237ENST00000638512 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
KCNMA1-237ENST00000638512 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
KCNMA1-237ENST00000638512 ABCB7O75027 752 aa15.46■□□□□ 0.07
KCNMA1-237ENST00000638512 POLA2Q14181 598 aa15.26■□□□□ 0.03
KCNMA1-237ENST00000638512 ZBTB22O15209 634 aa15.25■□□□□ 0.03
KCNMA1-237ENST00000638512 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
KCNMA1-237ENST00000638512 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
KCNMA1-237ENST00000638512 ZBTB12Q9Y330 459 aaPredicted RBP15.15■□□□□ 0.02
KCNMA1-237ENST00000638512 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
KCNMA1-237ENST00000638512 POTEHQ6S545 545 aa14.87□□□□□ -0.03
KCNMA1-237ENST00000638512 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
KCNMA1-237ENST00000638512 FBLN2P98095 1184 aa14.78□□□□□ -0.04
KCNMA1-237ENST00000638512 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
KCNMA1-237ENST00000638512 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
KCNMA1-237ENST00000638512 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
KCNMA1-237ENST00000638512 SPDYE2BA6NHP3 402 aa14.62□□□□□ -0.07
KCNMA1-237ENST00000638512 SPDYE6P0CI01 402 aa14.62□□□□□ -0.07
KCNMA1-237ENST00000638512 SPDYE2Q495Y8 402 aa14.62□□□□□ -0.07
KCNMA1-237ENST00000638512 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
KCNMA1-237ENST00000638512 REM2Q8IYK8 340 aaPredicted RBP14.58□□□□□ -0.08
KCNMA1-237ENST00000638512 MKRN4PQ13434 485 aaPredicted RBP14.5□□□□□ -0.09
KCNMA1-237ENST00000638512 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
KCNMA1-237ENST00000638512 PITPNM1O00562 1244 aa14.4□□□□□ -0.1
KCNMA1-237ENST00000638512 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
KCNMA1-237ENST00000638512 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
KCNMA1-237ENST00000638512 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
KCNMA1-237ENST00000638512 FXR2P51116 673 aaKnown RBP eCLIP14.28□□□□□ -0.12
KCNMA1-237ENST00000638512 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
KCNMA1-237ENST00000638512 PABPN1Q86U42 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
KCNMA1-237ENST00000638512 PRKAR2AP13861 404 aaKnown RBP14.05□□□□□ -0.16
KCNMA1-237ENST00000638512 HAX1O00165 279 aa14.04□□□□□ -0.16
KCNMA1-237ENST00000638512 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
KCNMA1-237ENST00000638512 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
KCNMA1-237ENST00000638512 SPDYE4A6NLX3 237 aa13.99□□□□□ -0.17
KCNMA1-237ENST00000638512 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
KCNMA1-237ENST00000638512 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
KCNMA1-237ENST00000638512 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
KCNMA1-237ENST00000638512 FARP1Q9Y4F1 1045 aaPredicted RBP13.75□□□□□ -0.21
KCNMA1-237ENST00000638512 EVX2Q03828 476 aa13.72□□□□□ -0.21
KCNMA1-237ENST00000638512 PROM2Q8N271 834 aa13.67□□□□□ -0.22
KCNMA1-237ENST00000638512 CREBZFQ9NS37 354 aa13.66□□□□□ -0.22
KCNMA1-237ENST00000638512 CD44P16070 742 aaKnown RBP13.63□□□□□ -0.23
KCNMA1-237ENST00000638512 CLCN6P51797 869 aa13.62□□□□□ -0.23
KCNMA1-237ENST00000638512 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
KCNMA1-237ENST00000638512 GABBR2O75899 941 aa13.54□□□□□ -0.24
KCNMA1-237ENST00000638512 PAK3O75914 559 aaPredicted RBP13.51□□□□□ -0.25
KCNMA1-237ENST00000638512 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
KCNMA1-237ENST00000638512 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
KCNMA1-237ENST00000638512 ZRANB1Q9UGI0 708 aa13.45□□□□□ -0.26
KCNMA1-237ENST00000638512 MNX1P50219 401 aaPredicted RBP13.41□□□□□ -0.26
KCNMA1-237ENST00000638512 FKBP8Q14318 412 aa13.39□□□□□ -0.27
KCNMA1-237ENST00000638512 MIER1Q8N108 512 aa13.33□□□□□ -0.28
KCNMA1-237ENST00000638512 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
KCNMA1-237ENST00000638512 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
KCNMA1-237ENST00000638512 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
KCNMA1-237ENST00000638512 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
KCNMA1-237ENST00000638512 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
KCNMA1-237ENST00000638512 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
KCNMA1-237ENST00000638512 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
KCNMA1-237ENST00000638512 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
KCNMA1-237ENST00000638512 LHX8Q68G74 356 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms