RNA–Protein interactions for RNA: ENST00000638049.1

LGI1-230, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,072 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-230ENST00000638049 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
LGI1-230ENST00000638049 CHIC1Q5VXU3 224 aa17.97■□□□□ 0.47
LGI1-230ENST00000638049 PHF23Q9BUL5 403 aaPredicted RBP15.9■□□□□ 0.14
LGI1-230ENST00000638049 SENP3Q9H4L4 574 aaPredicted RBP15.33■□□□□ 0.04
LGI1-230ENST00000638049 PLPPR3Q6T4P5 718 aa14.69□□□□□ -0.06
LGI1-230ENST00000638049 FOXD1Q16676 465 aa14.27□□□□□ -0.13
LGI1-230ENST00000638049 ADRA2BP18089 450 aa13.97□□□□□ -0.17
LGI1-230ENST00000638049 PPP6R1Q9UPN7 881 aa13.97□□□□□ -0.17
LGI1-230ENST00000638049 PIAS4Q8N2W9 510 aaPredicted RBP13.51□□□□□ -0.25
LGI1-230ENST00000638049 KCNA4P22459 653 aa13.04□□□□□ -0.32
LGI1-230ENST00000638049 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
LGI1-230ENST00000638049 MSH5O43196 834 aa12.97□□□□□ -0.33
LGI1-230ENST00000638049 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
LGI1-230ENST00000638049 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
LGI1-230ENST00000638049 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
LGI1-230ENST00000638049 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
LGI1-230ENST00000638049 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
LGI1-230ENST00000638049 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
LGI1-230ENST00000638049 SLC4A1APQ9BWU0 796 aaKnown RBP12.42□□□□□ -0.42
LGI1-230ENST00000638049 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
LGI1-230ENST00000638049 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
LGI1-230ENST00000638049 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
LGI1-230ENST00000638049 HOXD11P31277 338 aaPredicted RBP12.12□□□□□ -0.47
LGI1-230ENST00000638049 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
LGI1-230ENST00000638049 ZBTB22O15209 634 aa12.02□□□□□ -0.48
LGI1-230ENST00000638049 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
LGI1-230ENST00000638049 DCAF8L1A6NGE4 600 aa11.82□□□□□ -0.52
LGI1-230ENST00000638049 SLC4A2P04920 1241 aa11.82□□□□□ -0.52
LGI1-230ENST00000638049 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
LGI1-230ENST00000638049 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
LGI1-230ENST00000638049 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
LGI1-230ENST00000638049 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
LGI1-230ENST00000638049 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
LGI1-230ENST00000638049 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
LGI1-230ENST00000638049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.29□□□□□ -0.6
LGI1-230ENST00000638049 HNRNPUL2Q1KMD3 747 aaKnown RBP11.29□□□□□ -0.6
LGI1-230ENST00000638049 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
LGI1-230ENST00000638049 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
LGI1-230ENST00000638049 SPINK5Q9NQ38 1064 aaPredicted RBP11.1□□□□□ -0.63
LGI1-230ENST00000638049 APLP2Q06481 763 aa11.07□□□□□ -0.64
LGI1-230ENST00000638049 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
LGI1-230ENST00000638049 TRHP20396 242 aaPredicted RBP11.03□□□□□ -0.64
LGI1-230ENST00000638049 C1QBPQ07021 282 aaKnown RBP11.02□□□□□ -0.64
LGI1-230ENST00000638049 CAPN15O75808 1086 aa11□□□□□ -0.65
LGI1-230ENST00000638049 FKBP8Q14318 412 aa10.96□□□□□ -0.66
LGI1-230ENST00000638049 POLA2Q14181 598 aa10.89□□□□□ -0.67
LGI1-230ENST00000638049 ABCB7O75027 752 aa10.86□□□□□ -0.67
LGI1-230ENST00000638049 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
LGI1-230ENST00000638049 DSG3P32926 999 aa10.75□□□□□ -0.69
LGI1-230ENST00000638049 FBLN2P98095 1184 aa10.73□□□□□ -0.69
LGI1-230ENST00000638049 CACNB1Q02641 598 aaPredicted RBP10.72□□□□□ -0.69
LGI1-230ENST00000638049 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
LGI1-230ENST00000638049 ZBTB12Q9Y330 459 aaPredicted RBP10.62□□□□□ -0.71
LGI1-230ENST00000638049 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
LGI1-230ENST00000638049 PROM2Q8N271 834 aa10.49□□□□□ -0.73
LGI1-230ENST00000638049 ZNF692Q9BU19 519 aaPredicted RBP10.45□□□□□ -0.74
LGI1-230ENST00000638049 RTN4Q9NQC3 1192 aaKnown RBP10.43□□□□□ -0.74
LGI1-230ENST00000638049 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.75
LGI1-230ENST00000638049 SPDYE6P0CI01 402 aa10.4□□□□□ -0.75
LGI1-230ENST00000638049 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.75
LGI1-230ENST00000638049 FBXO3Q9UK99 471 aa10.4□□□□□ -0.75
LGI1-230ENST00000638049 SSUH2Q9Y2M2 353 aa10.36□□□□□ -0.75
LGI1-230ENST00000638049 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
LGI1-230ENST00000638049 PABPN1Q86U42 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
LGI1-230ENST00000638049 VASPP50552 380 aaPredicted RBP10.31□□□□□ -0.76
LGI1-230ENST00000638049 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
LGI1-230ENST00000638049 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
LGI1-230ENST00000638049 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
LGI1-230ENST00000638049 AKT1S1Q96B36 256 aa10.11□□□□□ -0.79
LGI1-230ENST00000638049 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
LGI1-230ENST00000638049 MIER1Q8N108 512 aa10.1□□□□□ -0.79
LGI1-230ENST00000638049 KLHL34Q8N239 644 aa10.09□□□□□ -0.79
LGI1-230ENST00000638049 REM2Q8IYK8 340 aaPredicted RBP10.06□□□□□ -0.8
LGI1-230ENST00000638049 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
LGI1-230ENST00000638049 SPDYE1Q8NFV5 336 aaPredicted RBP10.03□□□□□ -0.8
LGI1-230ENST00000638049 SPOCK2Q92563 424 aa10□□□□□ -0.81
LGI1-230ENST00000638049 PKD2Q13563 968 aa9.98□□□□□ -0.81
LGI1-230ENST00000638049 PITPNM1O00562 1244 aa9.95□□□□□ -0.82
LGI1-230ENST00000638049 PLEKHG5O94827 1062 aa9.95□□□□□ -0.82
LGI1-230ENST00000638049 PRR29P0C7W0 189 aa9.95□□□□□ -0.82
LGI1-230ENST00000638049 CREBZFQ9NS37 354 aa9.91□□□□□ -0.82
LGI1-230ENST00000638049 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
LGI1-230ENST00000638049 DCAF8L2P0C7V8 631 aa9.86□□□□□ -0.83
LGI1-230ENST00000638049 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
LGI1-230ENST00000638049 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
LGI1-230ENST00000638049 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
LGI1-230ENST00000638049 NUBP1P53384 320 aa9.81□□□□□ -0.84
LGI1-230ENST00000638049 CHADLQ6NUI6 762 aa9.81□□□□□ -0.84
LGI1-230ENST00000638049 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
LGI1-230ENST00000638049 RGL2O15211 777 aa9.78□□□□□ -0.84
LGI1-230ENST00000638049 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
LGI1-230ENST00000638049 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
LGI1-230ENST00000638049 GSE1Q14687 1217 aa9.71□□□□□ -0.86
LGI1-230ENST00000638049 PRKAR2AP13861 404 aaKnown RBP9.7□□□□□ -0.86
LGI1-230ENST00000638049 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
LGI1-230ENST00000638049 FAM212AQ96EL1 285 aa9.7□□□□□ -0.86
LGI1-230ENST00000638049 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
LGI1-230ENST00000638049 FXR2P51116 673 aaKnown RBP eCLIP9.68□□□□□ -0.86
LGI1-230ENST00000638049 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
LGI1-230ENST00000638049 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms