RNA–Protein interactions for RNA: ENST00000637956.1

CACNB4-268, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 1,430 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-268ENST00000637956 AEBP2Q6ZN18 517 aaPredicted RBP23.42■■□□□ 1.34
CACNB4-268ENST00000637956 CHIC1Q5VXU3 224 aa23.29■■□□□ 1.32
CACNB4-268ENST00000637956 PHF23Q9BUL5 403 aaPredicted RBP20.42■□□□□ 0.86
CACNB4-268ENST00000637956 SENP3Q9H4L4 574 aaPredicted RBP20.01■□□□□ 0.79
CACNB4-268ENST00000637956 PLPPR3Q6T4P5 718 aa19.13■□□□□ 0.65
CACNB4-268ENST00000637956 FOXD1Q16676 465 aa18.4■□□□□ 0.54
CACNB4-268ENST00000637956 ADRA2BP18089 450 aa17.94■□□□□ 0.46
CACNB4-268ENST00000637956 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.46
CACNB4-268ENST00000637956 PIAS4Q8N2W9 510 aaPredicted RBP17.52■□□□□ 0.4
CACNB4-268ENST00000637956 MSH5O43196 834 aa16.99■□□□□ 0.31
CACNB4-268ENST00000637956 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
CACNB4-268ENST00000637956 KCNA4P22459 653 aa16.74■□□□□ 0.27
CACNB4-268ENST00000637956 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
CACNB4-268ENST00000637956 NCBP3Q53F19 620 aaKnown RBP16.6■□□□□ 0.25
CACNB4-268ENST00000637956 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
CACNB4-268ENST00000637956 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
CACNB4-268ENST00000637956 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
CACNB4-268ENST00000637956 SLC4A1APQ9BWU0 796 aaKnown RBP16.09■□□□□ 0.17
CACNB4-268ENST00000637956 DMRT2Q9Y5R5 561 aa15.96■□□□□ 0.15
CACNB4-268ENST00000637956 POTEDQ86YR6 584 aa15.95■□□□□ 0.14
CACNB4-268ENST00000637956 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
CACNB4-268ENST00000637956 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
CACNB4-268ENST00000637956 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
CACNB4-268ENST00000637956 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
CACNB4-268ENST00000637956 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
CACNB4-268ENST00000637956 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
CACNB4-268ENST00000637956 ZBTB22O15209 634 aa15.35■□□□□ 0.05
CACNB4-268ENST00000637956 DCAF8L1A6NGE4 600 aa15.3■□□□□ 0.04
CACNB4-268ENST00000637956 SLC4A2P04920 1241 aa15.18■□□□□ 0.02
CACNB4-268ENST00000637956 MYCNP04198 464 aaPredicted RBP15.07■□□□□ 0
CACNB4-268ENST00000637956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 06e-7■■■■■ 26.8
CACNB4-268ENST00000637956 ATXN8OSP0DMR3 200 aa14.89□□□□□ -0.03
CACNB4-268ENST00000637956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.87□□□□□ -0.03
CACNB4-268ENST00000637956 HNRNPUL2Q1KMD3 747 aaKnown RBP14.87□□□□□ -0.03
CACNB4-268ENST00000637956 SAMD1Q6SPF0 538 aaPredicted RBP14.79□□□□□ -0.04
CACNB4-268ENST00000637956 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
CACNB4-268ENST00000637956 APLP2Q06481 763 aa14.69□□□□□ -0.06
CACNB4-268ENST00000637956 RNF39Q9H2S5 420 aa14.5□□□□□ -0.09
CACNB4-268ENST00000637956 ATF5Q9Y2D1 282 aaPredicted RBP14.48□□□□□ -0.09
CACNB4-268ENST00000637956 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
CACNB4-268ENST00000637956 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
CACNB4-268ENST00000637956 CAPN15O75808 1086 aa14.27□□□□□ -0.12
CACNB4-268ENST00000637956 TRHP20396 242 aaPredicted RBP14.26□□□□□ -0.13
CACNB4-268ENST00000637956 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
CACNB4-268ENST00000637956 FKBP8Q14318 412 aa14.12□□□□□ -0.15
CACNB4-268ENST00000637956 POLA2Q14181 598 aa14.07□□□□□ -0.16
CACNB4-268ENST00000637956 FBLN2P98095 1184 aa14.06□□□□□ -0.16
CACNB4-268ENST00000637956 ZBTB12Q9Y330 459 aaPredicted RBP14.01□□□□□ -0.17
CACNB4-268ENST00000637956 ABCB7O75027 752 aa13.97□□□□□ -0.17
CACNB4-268ENST00000637956 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.18
CACNB4-268ENST00000637956 DSG3P32926 999 aa13.9□□□□□ -0.19
CACNB4-268ENST00000637956 MKRN4PQ13434 485 aaPredicted RBP13.89□□□□□ -0.19
CACNB4-268ENST00000637956 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
CACNB4-268ENST00000637956 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
CACNB4-268ENST00000637956 SPDYE2BA6NHP3 402 aa13.6□□□□□ -0.23
CACNB4-268ENST00000637956 SPDYE6P0CI01 402 aa13.6□□□□□ -0.23
CACNB4-268ENST00000637956 SPDYE2Q495Y8 402 aa13.6□□□□□ -0.23
CACNB4-268ENST00000637956 PROM2Q8N271 834 aa13.59□□□□□ -0.23
CACNB4-268ENST00000637956 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
CACNB4-268ENST00000637956 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
CACNB4-268ENST00000637956 AMER1Q5JTC6 1135 aaPredicted RBP13.5□□□□□ -0.25
CACNB4-268ENST00000637956 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.26
CACNB4-268ENST00000637956 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
CACNB4-268ENST00000637956 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNB4-268ENST00000637956 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
CACNB4-268ENST00000637956 RTN4Q9NQC3 1192 aaKnown RBP13.33□□□□□ -0.28
CACNB4-268ENST00000637956 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
CACNB4-268ENST00000637956 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
CACNB4-268ENST00000637956 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
CACNB4-268ENST00000637956 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
CACNB4-268ENST00000637956 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
CACNB4-268ENST00000637956 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
CACNB4-268ENST00000637956 KLHL34Q8N239 644 aa13.11□□□□□ -0.31
CACNB4-268ENST00000637956 MIER1Q8N108 512 aa13.1□□□□□ -0.31
CACNB4-268ENST00000637956 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
CACNB4-268ENST00000637956 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
CACNB4-268ENST00000637956 SPOCK2Q92563 424 aa13.02□□□□□ -0.33
CACNB4-268ENST00000637956 CLEC11AQ9Y240 323 aa13.02□□□□□ -0.33
CACNB4-268ENST00000637956 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
CACNB4-268ENST00000637956 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CACNB4-268ENST00000637956 PKD2Q13563 968 aa12.81□□□□□ -0.36
CACNB4-268ENST00000637956 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
CACNB4-268ENST00000637956 ECM2O94769 699 aaPredicted RBP12.77□□□□□ -0.37
CACNB4-268ENST00000637956 DCAF8L2P0C7V8 631 aa12.76□□□□□ -0.37
CACNB4-268ENST00000637956 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
CACNB4-268ENST00000637956 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
CACNB4-268ENST00000637956 GSE1Q14687 1217 aa12.73□□□□□ -0.37
CACNB4-268ENST00000637956 TRIM41Q8WV44 630 aa12.73□□□□□ -0.37
CACNB4-268ENST00000637956 FAM212AQ96EL1 285 aa12.68□□□□□ -0.38
CACNB4-268ENST00000637956 NUBP1P53384 320 aa12.67□□□□□ -0.38
CACNB4-268ENST00000637956 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
CACNB4-268ENST00000637956 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
CACNB4-268ENST00000637956 DCAF8Q5TAQ9 597 aa12.64□□□□□ -0.39
CACNB4-268ENST00000637956 CHADLQ6NUI6 762 aa12.6□□□□□ -0.39
CACNB4-268ENST00000637956 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
CACNB4-268ENST00000637956 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
CACNB4-268ENST00000637956 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
CACNB4-268ENST00000637956 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
CACNB4-268ENST00000637956 RGL2O15211 777 aa12.55□□□□□ -0.4
CACNB4-268ENST00000637956 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 246.8 ms