RNA–Protein interactions for RNA: ENST00000637925.1

LGI1-229, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,165 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-229ENST00000637925 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.4
LGI1-229ENST00000637925 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
LGI1-229ENST00000637925 PHF23Q9BUL5 403 aaPredicted RBP15.12■□□□□ 0.01
LGI1-229ENST00000637925 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
LGI1-229ENST00000637925 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
LGI1-229ENST00000637925 FOXD1Q16676 465 aa13.76□□□□□ -0.21
LGI1-229ENST00000637925 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
LGI1-229ENST00000637925 ADRA2BP18089 450 aa13.28□□□□□ -0.28
LGI1-229ENST00000637925 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
LGI1-229ENST00000637925 MSH5O43196 834 aa12.62□□□□□ -0.39
LGI1-229ENST00000637925 PPP4R3CPQ6ZMV5 832 aa12.3□□□□□ -0.44
LGI1-229ENST00000637925 KCNA4P22459 653 aa12.13□□□□□ -0.47
LGI1-229ENST00000637925 SCAF1Q9H7N4 1312 aaKnown RBP12.1□□□□□ -0.47
LGI1-229ENST00000637925 MAPK8IP2Q13387 824 aaPredicted RBP12.03□□□□□ -0.48
LGI1-229ENST00000637925 NCBP3Q53F19 620 aaKnown RBP11.96□□□□□ -0.49
LGI1-229ENST00000637925 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
LGI1-229ENST00000637925 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
LGI1-229ENST00000637925 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
LGI1-229ENST00000637925 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
LGI1-229ENST00000637925 HOXD11P31277 338 aaPredicted RBP11.64□□□□□ -0.55
LGI1-229ENST00000637925 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
LGI1-229ENST00000637925 DNAJC5BQ9UF47 199 aa11.52□□□□□ -0.56
LGI1-229ENST00000637925 POTEDQ86YR6 584 aa11.38□□□□□ -0.59
LGI1-229ENST00000637925 EHMT2Q96KQ7 1210 aa11.31□□□□□ -0.6
LGI1-229ENST00000637925 DCAF8L1A6NGE4 600 aa11.27□□□□□ -0.61
LGI1-229ENST00000637925 ZBTB22O15209 634 aa11.2□□□□□ -0.62
LGI1-229ENST00000637925 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
LGI1-229ENST00000637925 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
LGI1-229ENST00000637925 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
LGI1-229ENST00000637925 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.64
LGI1-229ENST00000637925 U3KPZ7 1027 aaPredicted RBP10.93□□□□□ -0.66
LGI1-229ENST00000637925 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
LGI1-229ENST00000637925 RNF39Q9H2S5 420 aa10.85□□□□□ -0.67
LGI1-229ENST00000637925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.76□□□□□ -0.69
LGI1-229ENST00000637925 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
LGI1-229ENST00000637925 SAMD1Q6SPF0 538 aaPredicted RBP10.74□□□□□ -0.69
LGI1-229ENST00000637925 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
LGI1-229ENST00000637925 C1QBPQ07021 282 aaKnown RBP10.7□□□□□ -0.7
LGI1-229ENST00000637925 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
LGI1-229ENST00000637925 APLP2Q06481 763 aa10.6□□□□□ -0.71
LGI1-229ENST00000637925 SPINK5Q9NQ38 1064 aaPredicted RBP10.59□□□□□ -0.71
LGI1-229ENST00000637925 CAPN15O75808 1086 aa10.5□□□□□ -0.73
LGI1-229ENST00000637925 ZNF219Q9P2Y4 722 aaPredicted RBP10.49□□□□□ -0.73
LGI1-229ENST00000637925 TRHP20396 242 aaPredicted RBP10.48□□□□□ -0.73
LGI1-229ENST00000637925 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
LGI1-229ENST00000637925 DSG3P32926 999 aa10.35□□□□□ -0.75
LGI1-229ENST00000637925 POLA2Q14181 598 aa10.34□□□□□ -0.75
LGI1-229ENST00000637925 ABCB7O75027 752 aa10.33□□□□□ -0.76
LGI1-229ENST00000637925 MKRN4PQ13434 485 aaPredicted RBP10.21□□□□□ -0.77
LGI1-229ENST00000637925 ZBTB12Q9Y330 459 aaPredicted RBP10.16□□□□□ -0.78
LGI1-229ENST00000637925 FBLN2P98095 1184 aa10.14□□□□□ -0.79
LGI1-229ENST00000637925 FKBP8Q14318 412 aa10.06□□□□□ -0.8
LGI1-229ENST00000637925 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
LGI1-229ENST00000637925 SPDYE4A6NLX3 237 aa9.97□□□□□ -0.81
LGI1-229ENST00000637925 SPDYE2BA6NHP3 402 aa9.91□□□□□ -0.82
LGI1-229ENST00000637925 SPDYE6P0CI01 402 aa9.91□□□□□ -0.82
LGI1-229ENST00000637925 SPDYE2Q495Y8 402 aa9.91□□□□□ -0.82
LGI1-229ENST00000637925 PROM2Q8N271 834 aa9.88□□□□□ -0.83
LGI1-229ENST00000637925 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
LGI1-229ENST00000637925 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
LGI1-229ENST00000637925 RBM42Q9BTD8 480 aaKnown RBP9.82□□□□□ -0.84
LGI1-229ENST00000637925 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
LGI1-229ENST00000637925 AKT1S1Q96B36 256 aa9.73□□□□□ -0.85
LGI1-229ENST00000637925 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
LGI1-229ENST00000637925 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.86
LGI1-229ENST00000637925 SPDYE1Q8NFV5 336 aaPredicted RBP9.58□□□□□ -0.88
LGI1-229ENST00000637925 STAG3Q9UJ98 1225 aa9.58□□□□□ -0.88
LGI1-229ENST00000637925 VASPP50552 380 aaPredicted RBP9.56□□□□□ -0.88
LGI1-229ENST00000637925 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
LGI1-229ENST00000637925 CLEC11AQ9Y240 323 aa9.52□□□□□ -0.89
LGI1-229ENST00000637925 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.9
LGI1-229ENST00000637925 PRR29P0C7W0 189 aa9.45□□□□□ -0.9
LGI1-229ENST00000637925 MIER1Q8N108 512 aa9.42□□□□□ -0.9
LGI1-229ENST00000637925 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
LGI1-229ENST00000637925 CHRDL2Q6WN34 429 aa9.41□□□□□ -0.9
LGI1-229ENST00000637925 CREBZFQ9NS37 354 aa9.39□□□□□ -0.91
LGI1-229ENST00000637925 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
LGI1-229ENST00000637925 PLEKHG5O94827 1062 aa9.34□□□□□ -0.91
LGI1-229ENST00000637925 MNX1P50219 401 aaPredicted RBP9.34□□□□□ -0.91
LGI1-229ENST00000637925 KLHL34Q8N239 644 aa9.32□□□□□ -0.92
LGI1-229ENST00000637925 CHADLQ6NUI6 762 aa9.31□□□□□ -0.92
LGI1-229ENST00000637925 RTN4Q9NQC3 1192 aaKnown RBP9.31□□□□□ -0.92
LGI1-229ENST00000637925 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
LGI1-229ENST00000637925 AMER1Q5JTC6 1135 aaPredicted RBP9.3□□□□□ -0.92
LGI1-229ENST00000637925 ZBTB47Q9UFB7 747 aaPredicted RBP9.3□□□□□ -0.92
LGI1-229ENST00000637925 PRKAR2AP13861 404 aaKnown RBP9.29□□□□□ -0.92
LGI1-229ENST00000637925 SPOCK2Q92563 424 aa9.28□□□□□ -0.92
LGI1-229ENST00000637925 FARP1Q9Y4F1 1045 aaPredicted RBP9.23□□□□□ -0.93
LGI1-229ENST00000637925 NUBP1P53384 320 aa9.23□□□□□ -0.93
LGI1-229ENST00000637925 NPM1P06748 294 aaKnown RBP eCLIP9.18□□□□□ -0.94
LGI1-229ENST00000637925 PKD2Q13563 968 aa9.17□□□□□ -0.94
LGI1-229ENST00000637925 RASEFQ8IZ41 740 aa9.17□□□□□ -0.94
LGI1-229ENST00000637925 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
LGI1-229ENST00000637925 CIZ1Q9ULV3 898 aaPredicted RBP9.11□□□□□ -0.95
LGI1-229ENST00000637925 GSE1Q14687 1217 aa9.09□□□□□ -0.95
LGI1-229ENST00000637925 DCAF8Q5TAQ9 597 aa9.07□□□□□ -0.96
LGI1-229ENST00000637925 TSPYL2Q9H2G4 693 aaPredicted RBP9.06□□□□□ -0.96
LGI1-229ENST00000637925 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
LGI1-229ENST00000637925 TRIM41Q8WV44 630 aa9.03□□□□□ -0.96
LGI1-229ENST00000637925 CCDC61Q9Y6R9 512 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms