RNA–Protein interactions for RNA: ENST00000637611.1

LGI1-227, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-227ENST00000637611 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
LGI1-227ENST00000637611 CHIC1Q5VXU3 224 aa15.9■□□□□ 0.14
LGI1-227ENST00000637611 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
LGI1-227ENST00000637611 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
LGI1-227ENST00000637611 PLPPR3Q6T4P5 718 aa13.07□□□□□ -0.32
LGI1-227ENST00000637611 FOXD1Q16676 465 aa12.47□□□□□ -0.41
LGI1-227ENST00000637611 ADRA2BP18089 450 aa12.41□□□□□ -0.42
LGI1-227ENST00000637611 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
LGI1-227ENST00000637611 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
LGI1-227ENST00000637611 KCNA4P22459 653 aa11.86□□□□□ -0.51
LGI1-227ENST00000637611 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
LGI1-227ENST00000637611 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
LGI1-227ENST00000637611 NCBP3Q53F19 620 aaKnown RBP11.33□□□□□ -0.6
LGI1-227ENST00000637611 SLC4A1APQ9BWU0 796 aaKnown RBP11.3□□□□□ -0.6
LGI1-227ENST00000637611 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
LGI1-227ENST00000637611 MSH5O43196 834 aa11.23□□□□□ -0.61
LGI1-227ENST00000637611 MAPK8IP2Q13387 824 aaPredicted RBP11.16□□□□□ -0.62
LGI1-227ENST00000637611 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
LGI1-227ENST00000637611 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
LGI1-227ENST00000637611 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
LGI1-227ENST00000637611 ZBTB22O15209 634 aa10.94□□□□□ -0.66
LGI1-227ENST00000637611 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
LGI1-227ENST00000637611 DMRT2Q9Y5R5 561 aa10.75□□□□□ -0.69
LGI1-227ENST00000637611 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
LGI1-227ENST00000637611 HOXD11P31277 338 aaPredicted RBP10.66□□□□□ -0.7
LGI1-227ENST00000637611 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
LGI1-227ENST00000637611 SLC4A2P04920 1241 aa10.57□□□□□ -0.72
LGI1-227ENST00000637611 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
LGI1-227ENST00000637611 MYCNP04198 464 aaPredicted RBP10.33□□□□□ -0.76
LGI1-227ENST00000637611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
LGI1-227ENST00000637611 POTEDQ86YR6 584 aa10.23□□□□□ -0.77
LGI1-227ENST00000637611 ATXN8OSP0DMR3 200 aa10.19□□□□□ -0.78
LGI1-227ENST00000637611 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
LGI1-227ENST00000637611 U3KPZ7 1027 aaPredicted RBP10.13□□□□□ -0.79
LGI1-227ENST00000637611 FKBP8Q14318 412 aa10.09□□□□□ -0.79
LGI1-227ENST00000637611 SAMD1Q6SPF0 538 aaPredicted RBP10.02□□□□□ -0.81
LGI1-227ENST00000637611 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
LGI1-227ENST00000637611 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
LGI1-227ENST00000637611 RTN4Q9NQC3 1192 aaKnown RBP9.9□□□□□ -0.83
LGI1-227ENST00000637611 ZNF219Q9P2Y4 722 aaPredicted RBP9.87□□□□□ -0.83
LGI1-227ENST00000637611 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
LGI1-227ENST00000637611 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
LGI1-227ENST00000637611 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
LGI1-227ENST00000637611 APLP2Q06481 763 aa9.75□□□□□ -0.85
LGI1-227ENST00000637611 RNF39Q9H2S5 420 aa9.72□□□□□ -0.85
LGI1-227ENST00000637611 CAPN15O75808 1086 aa9.71□□□□□ -0.85
LGI1-227ENST00000637611 MKRN4PQ13434 485 aaPredicted RBP9.71□□□□□ -0.86
LGI1-227ENST00000637611 POLA2Q14181 598 aa9.69□□□□□ -0.86
LGI1-227ENST00000637611 SPDYE4A6NLX3 237 aa9.65□□□□□ -0.86
LGI1-227ENST00000637611 ABCB7O75027 752 aa9.63□□□□□ -0.87
LGI1-227ENST00000637611 FBLN2P98095 1184 aa9.58□□□□□ -0.88
LGI1-227ENST00000637611 C1QBPQ07021 282 aaKnown RBP9.56□□□□□ -0.88
LGI1-227ENST00000637611 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
LGI1-227ENST00000637611 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
LGI1-227ENST00000637611 PROM2Q8N271 834 aa9.45□□□□□ -0.9
LGI1-227ENST00000637611 VASPP50552 380 aaPredicted RBP9.41□□□□□ -0.9
LGI1-227ENST00000637611 DSG3P32926 999 aa9.41□□□□□ -0.9
LGI1-227ENST00000637611 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
LGI1-227ENST00000637611 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
LGI1-227ENST00000637611 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
LGI1-227ENST00000637611 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
LGI1-227ENST00000637611 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
LGI1-227ENST00000637611 CACNB1Q02641 598 aaPredicted RBP9.24□□□□□ -0.93
LGI1-227ENST00000637611 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
LGI1-227ENST00000637611 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.93
LGI1-227ENST00000637611 SPDYE6P0CI01 402 aa9.21□□□□□ -0.93
LGI1-227ENST00000637611 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.93
LGI1-227ENST00000637611 KLHL34Q8N239 644 aa9.21□□□□□ -0.94
LGI1-227ENST00000637611 SSUH2Q9Y2M2 353 aa9.2□□□□□ -0.94
LGI1-227ENST00000637611 PKD2Q13563 968 aa9.19□□□□□ -0.94
LGI1-227ENST00000637611 PLCD3Q8N3E9 789 aa9.16□□□□□ -0.94
LGI1-227ENST00000637611 MIER1Q8N108 512 aa9.13□□□□□ -0.95
LGI1-227ENST00000637611 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
LGI1-227ENST00000637611 STAG3Q9UJ98 1225 aa9.11□□□□□ -0.95
LGI1-227ENST00000637611 PLCB2Q00722 1185 aa9.07□□□□□ -0.96
LGI1-227ENST00000637611 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
LGI1-227ENST00000637611 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
LGI1-227ENST00000637611 CIZ1Q9ULV3 898 aaPredicted RBP9□□□□□ -0.97
LGI1-227ENST00000637611 RGL2O15211 777 aa8.99□□□□□ -0.97
LGI1-227ENST00000637611 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
LGI1-227ENST00000637611 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
LGI1-227ENST00000637611 CLEC11AQ9Y240 323 aa8.95□□□□□ -0.98
LGI1-227ENST00000637611 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
LGI1-227ENST00000637611 CFAP44Q96MT7 982 aa8.89□□□□□ -0.99
LGI1-227ENST00000637611 PAXIP1Q6ZW49 1069 aaPredicted RBP8.88□□□□□ -0.99
LGI1-227ENST00000637611 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
LGI1-227ENST00000637611 CHGAP10645 457 aaKnown RBP8.86□□□□□ -0.99
LGI1-227ENST00000637611 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.86□□□□□ -0.99
LGI1-227ENST00000637611 BBXQ8WY36 941 aaPredicted RBP8.85□□□□□ -0.99
LGI1-227ENST00000637611 AKT1S1Q96B36 256 aa8.85□□□□□ -0.99
LGI1-227ENST00000637611 RBM42Q9BTD8 480 aaKnown RBP8.85□□□□□ -0.99
LGI1-227ENST00000637611 PRR29P0C7W0 189 aa8.84□□□□□ -0.99
LGI1-227ENST00000637611 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
LGI1-227ENST00000637611 NUBP1P53384 320 aa8.81□□□□□ -1
LGI1-227ENST00000637611 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
LGI1-227ENST00000637611 CREBZFQ9NS37 354 aa8.81□□□□□ -1
LGI1-227ENST00000637611 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
LGI1-227ENST00000637611 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
LGI1-227ENST00000637611 MNX1P50219 401 aaPredicted RBP8.77□□□□□ -1.01
LGI1-227ENST00000637611 PITPNM1O00562 1244 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms