RNA–Protein interactions for RNA: ENST00000637226.1

GABRB3-222, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-222ENST00000637226 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-222ENST00000637226 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
GABRB3-222ENST00000637226 SENP3Q9H4L4 574 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-222ENST00000637226 PHF23Q9BUL5 403 aaPredicted RBP10.89□□□□□ -0.67
GABRB3-222ENST00000637226 FOXD1Q16676 465 aa10.28□□□□□ -0.76
GABRB3-222ENST00000637226 PLPPR3Q6T4P5 718 aa9.72□□□□□ -0.85
GABRB3-222ENST00000637226 MSH5O43196 834 aa9.68□□□□□ -0.86
GABRB3-222ENST00000637226 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
GABRB3-222ENST00000637226 POTEDQ86YR6 584 aa9.56□□□□□ -0.88
GABRB3-222ENST00000637226 PPP6R1Q9UPN7 881 aa9.54□□□□□ -0.88
GABRB3-222ENST00000637226 ADRA2BP18089 450 aa9.53□□□□□ -0.88
GABRB3-222ENST00000637226 MAPK8IP2Q13387 824 aaPredicted RBP8.77□□□□□ -1.01
GABRB3-222ENST00000637226 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
GABRB3-222ENST00000637226 DMRT2Q9Y5R5 561 aa8.72□□□□□ -1.01
GABRB3-222ENST00000637226 PPP4R3CPQ6ZMV5 832 aa8.51□□□□□ -1.05
GABRB3-222ENST00000637226 DCAF8L1A6NGE4 600 aa8.44□□□□□ -1.06
GABRB3-222ENST00000637226 HOXD11P31277 338 aaPredicted RBP8.37□□□□□ -1.07
GABRB3-222ENST00000637226 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
GABRB3-222ENST00000637226 CNKSR2Q8WXI2 1034 aa8.37□□□□□ -1.07
GABRB3-222ENST00000637226 RNF216Q9NWF9 866 aaPredicted RBP8.3□□□□□ -1.08
GABRB3-222ENST00000637226 RNF39Q9H2S5 420 aa8.22□□□□□ -1.09
GABRB3-222ENST00000637226 NCBP3Q53F19 620 aaKnown RBP8.18□□□□□ -1.1
GABRB3-222ENST00000637226 C1QBPQ07021 282 aaKnown RBP8.12□□□□□ -1.11
GABRB3-222ENST00000637226 DNAJC5BQ9UF47 199 aa8.09□□□□□ -1.11
GABRB3-222ENST00000637226 NPM3O75607 178 aaKnown RBP8.02□□□□□ -1.13
GABRB3-222ENST00000637226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.02□□□□□ -1.13
GABRB3-222ENST00000637226 KCNA4P22459 653 aa7.8□□□□□ -1.16
GABRB3-222ENST00000637226 U3KPZ7 1027 aaPredicted RBP7.8□□□□□ -1.16
GABRB3-222ENST00000637226 CAPN15O75808 1086 aa7.75□□□□□ -1.17
GABRB3-222ENST00000637226 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
GABRB3-222ENST00000637226 DSG3P32926 999 aa7.68□□□□□ -1.18
GABRB3-222ENST00000637226 SLC4A2P04920 1241 aa7.67□□□□□ -1.18
GABRB3-222ENST00000637226 APLP2Q06481 763 aa7.63□□□□□ -1.19
GABRB3-222ENST00000637226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.6□□□□□ -1.19
GABRB3-222ENST00000637226 TRHP20396 242 aaPredicted RBP7.6□□□□□ -1.19
GABRB3-222ENST00000637226 HNRNPUL2Q1KMD3 747 aaKnown RBP7.6□□□□□ -1.19
GABRB3-222ENST00000637226 ZNF219Q9P2Y4 722 aaPredicted RBP7.57□□□□□ -1.2
GABRB3-222ENST00000637226 ABCB7O75027 752 aa7.54□□□□□ -1.2
GABRB3-222ENST00000637226 SAMD1Q6SPF0 538 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-222ENST00000637226 POTEHQ6S545 545 aa7.48□□□□□ -1.21
GABRB3-222ENST00000637226 MYCNP04198 464 aaPredicted RBP7.44□□□□□ -1.22
GABRB3-222ENST00000637226 POLA2Q14181 598 aa7.37□□□□□ -1.23
GABRB3-222ENST00000637226 SLC4A1APQ9BWU0 796 aaKnown RBP7.37□□□□□ -1.23
GABRB3-222ENST00000637226 RBM42Q9BTD8 480 aaKnown RBP7.36□□□□□ -1.23
GABRB3-222ENST00000637226 FOXD4L1Q9NU39 408 aa7.32□□□□□ -1.24
GABRB3-222ENST00000637226 ATF5Q9Y2D1 282 aaPredicted RBP7.25□□□□□ -1.25
GABRB3-222ENST00000637226 ZBTB12Q9Y330 459 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-222ENST00000637226 CHRDL2Q6WN34 429 aa7.21□□□□□ -1.26
GABRB3-222ENST00000637226 AKT1S1Q96B36 256 aa7.17□□□□□ -1.26
GABRB3-222ENST00000637226 ZBTB22O15209 634 aa7.14□□□□□ -1.27
GABRB3-222ENST00000637226 OSCARQ8IYS5 282 aa7.12□□□□□ -1.27
GABRB3-222ENST00000637226 ATXN8OSP0DMR3 200 aa7.09□□□□□ -1.27
GABRB3-222ENST00000637226 REM2Q8IYK8 340 aaPredicted RBP7.09□□□□□ -1.27
GABRB3-222ENST00000637226 FBLN2P98095 1184 aa7.02□□□□□ -1.29
GABRB3-222ENST00000637226 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
GABRB3-222ENST00000637226 PITPNM1O00562 1244 aa7.01□□□□□ -1.29
GABRB3-222ENST00000637226 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
GABRB3-222ENST00000637226 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
GABRB3-222ENST00000637226 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
GABRB3-222ENST00000637226 SP7Q8TDD2 431 aaPredicted RBP6.98□□□□□ -1.29
GABRB3-222ENST00000637226 FXR2P51116 673 aaKnown RBP eCLIP6.96□□□□□ -1.3
GABRB3-222ENST00000637226 HAX1O00165 279 aa6.95□□□□□ -1.3
GABRB3-222ENST00000637226 CLEC11AQ9Y240 323 aa6.91□□□□□ -1.3
GABRB3-222ENST00000637226 MKRN4PQ13434 485 aaPredicted RBP6.9□□□□□ -1.3
GABRB3-222ENST00000637226 ZNF692Q9BU19 519 aaPredicted RBP6.9□□□□□ -1.3
GABRB3-222ENST00000637226 SPDYE1Q8NFV5 336 aaPredicted RBP6.89□□□□□ -1.31
GABRB3-222ENST00000637226 PRKAR2AP13861 404 aaKnown RBP6.85□□□□□ -1.31
GABRB3-222ENST00000637226 SSUH2Q9Y2M2 353 aa6.85□□□□□ -1.31
GABRB3-222ENST00000637226 EVX2Q03828 476 aa6.81□□□□□ -1.32
GABRB3-222ENST00000637226 PABPN1Q86U42 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
GABRB3-222ENST00000637226 PRR29P0C7W0 189 aa6.77□□□□□ -1.33
GABRB3-222ENST00000637226 CSRNP3Q8WYN3 585 aa6.77□□□□□ -1.33
GABRB3-222ENST00000637226 CHADLQ6NUI6 762 aa6.75□□□□□ -1.33
GABRB3-222ENST00000637226 C19orf67A6NJJ6 358 aa6.74□□□□□ -1.33
GABRB3-222ENST00000637226 GABBR2O75899 941 aa6.67□□□□□ -1.34
GABRB3-222ENST00000637226 EHMT2Q96KQ7 1210 aa6.67□□□□□ -1.34
GABRB3-222ENST00000637226 FARP1Q9Y4F1 1045 aaPredicted RBP6.64□□□□□ -1.35
GABRB3-222ENST00000637226 CD44P16070 742 aaKnown RBP6.63□□□□□ -1.35
GABRB3-222ENST00000637226 STAG3Q9UJ98 1225 aa6.61□□□□□ -1.35
GABRB3-222ENST00000637226 SPDYE4A6NLX3 237 aa6.58□□□□□ -1.36
GABRB3-222ENST00000637226 CLCN6P51797 869 aa6.56□□□□□ -1.36
GABRB3-222ENST00000637226 LHX8Q68G74 356 aa6.56□□□□□ -1.36
GABRB3-222ENST00000637226 CREBZFQ9NS37 354 aa6.54□□□□□ -1.36
GABRB3-222ENST00000637226 ZRANB1Q9UGI0 708 aa6.53□□□□□ -1.36
GABRB3-222ENST00000637226 DCBLD2Q96PD2 775 aa6.51□□□□□ -1.37
GABRB3-222ENST00000637226 POTEIP0CG38 1075 aa6.5□□□□□ -1.37
GABRB3-222ENST00000637226 ZNF579Q8NAF0 562 aaKnown RBP6.5□□□□□ -1.37
GABRB3-222ENST00000637226 PAK3O75914 559 aaPredicted RBP6.48□□□□□ -1.37
GABRB3-222ENST00000637226 NPM1P06748 294 aaKnown RBP eCLIP6.47□□□□□ -1.37
GABRB3-222ENST00000637226 GALR2O43603 387 aaPredicted RBP6.43□□□□□ -1.38
GABRB3-222ENST00000637226 PHF12Q96QT6 1004 aa6.41□□□□□ -1.38
GABRB3-222ENST00000637226 MNX1P50219 401 aaPredicted RBP6.4□□□□□ -1.38
GABRB3-222ENST00000637226 PROM2Q8N271 834 aa6.35□□□□□ -1.39
GABRB3-222ENST00000637226 PLEKHG5O94827 1062 aa6.34□□□□□ -1.39
GABRB3-222ENST00000637226 TSPYL2Q9H2G4 693 aaPredicted RBP6.34□□□□□ -1.39
GABRB3-222ENST00000637226 MIER1Q8N108 512 aa6.32□□□□□ -1.4
GABRB3-222ENST00000637226 MS4A3Q96HJ5 214 aa6.32□□□□□ -1.4
GABRB3-222ENST00000637226 PELP1Q8IZL8 1130 aaKnown RBP6.3□□□□□ -1.4
GABRB3-222ENST00000637226 POTEB2H3BUK9 544 aa6.29□□□□□ -1.4
GABRB3-222ENST00000637226 ASTLQ6HA08 431 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms