RNA–Protein interactions for RNA: ENST00000636758.1

SMARCA2-253, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-253ENST00000636758 AEBP2Q6ZN18 517 aaPredicted RBP10.77□□□□□ -0.69
SMARCA2-253ENST00000636758 CHIC1Q5VXU3 224 aa10.42□□□□□ -0.74
SMARCA2-253ENST00000636758 PHF23Q9BUL5 403 aaPredicted RBP9.2□□□□□ -0.94
SMARCA2-253ENST00000636758 SENP3Q9H4L4 574 aaPredicted RBP9.12□□□□□ -0.95
SMARCA2-253ENST00000636758 FOXD1Q16676 465 aa8.53□□□□□ -1.04
SMARCA2-253ENST00000636758 PLPPR3Q6T4P5 718 aa8.52□□□□□ -1.05
SMARCA2-253ENST00000636758 ADRA2BP18089 450 aa8.12□□□□□ -1.11
SMARCA2-253ENST00000636758 PPP6R1Q9UPN7 881 aa8.11□□□□□ -1.11
SMARCA2-253ENST00000636758 PIAS4Q8N2W9 510 aaPredicted RBP7.98□□□□□ -1.13
SMARCA2-253ENST00000636758 MSH5O43196 834 aa7.92□□□□□ -1.14
SMARCA2-253ENST00000636758 POTEDQ86YR6 584 aa7.69□□□□□ -1.18
SMARCA2-253ENST00000636758 PPP4R3CPQ6ZMV5 832 aa7.55□□□□□ -1.2
SMARCA2-253ENST00000636758 KCNA4P22459 653 aa7.52□□□□□ -1.21
SMARCA2-253ENST00000636758 SCAF1Q9H7N4 1312 aaKnown RBP7.38□□□□□ -1.23
SMARCA2-253ENST00000636758 MAPK8IP2Q13387 824 aaPredicted RBP7.36□□□□□ -1.23
SMARCA2-253ENST00000636758 NCBP3Q53F19 620 aaKnown RBP7.36□□□□□ -1.23
SMARCA2-253ENST00000636758 NPM3O75607 178 aaKnown RBP7.28□□□□□ -1.24
SMARCA2-253ENST00000636758 CNKSR2Q8WXI2 1034 aa7.28□□□□□ -1.24
SMARCA2-253ENST00000636758 DMRT2Q9Y5R5 561 aa7.25□□□□□ -1.25
SMARCA2-253ENST00000636758 SLC4A1APQ9BWU0 796 aaKnown RBP7.18□□□□□ -1.26
SMARCA2-253ENST00000636758 EHMT2Q96KQ7 1210 aa7.17□□□□□ -1.26
SMARCA2-253ENST00000636758 RNF216Q9NWF9 866 aaPredicted RBP7.11□□□□□ -1.27
SMARCA2-253ENST00000636758 HOXD11P31277 338 aaPredicted RBP7.03□□□□□ -1.28
SMARCA2-253ENST00000636758 DCAF8L1A6NGE4 600 aa6.97□□□□□ -1.29
SMARCA2-253ENST00000636758 CSRNP3Q8WYN3 585 aa6.96□□□□□ -1.3
SMARCA2-253ENST00000636758 ZBTB22O15209 634 aa6.92□□□□□ -1.3
SMARCA2-253ENST00000636758 DNAJC5BQ9UF47 199 aa6.92□□□□□ -1.3
SMARCA2-253ENST00000636758 FOXD4L1Q9NU39 408 aa6.86□□□□□ -1.31
SMARCA2-253ENST00000636758 SLC4A2P04920 1241 aa6.83□□□□□ -1.32
SMARCA2-253ENST00000636758 RNF39Q9H2S5 420 aa6.8□□□□□ -1.32
SMARCA2-253ENST00000636758 CACNB1Q02641 598 aaPredicted RBP6.79□□□□□ -1.32
SMARCA2-253ENST00000636758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMARCA2-253ENST00000636758 MYCNP04198 464 aaPredicted RBP6.7□□□□□ -1.34
SMARCA2-253ENST00000636758 C1QBPQ07021 282 aaKnown RBP6.67□□□□□ -1.34
SMARCA2-253ENST00000636758 U3KPZ7 1027 aaPredicted RBP6.65□□□□□ -1.34
SMARCA2-253ENST00000636758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.57□□□□□ -1.36
SMARCA2-253ENST00000636758 HNRNPUL2Q1KMD3 747 aaKnown RBP6.57□□□□□ -1.36
SMARCA2-253ENST00000636758 ATXN8OSP0DMR3 200 aa6.56□□□□□ -1.36
SMARCA2-253ENST00000636758 SAMD1Q6SPF0 538 aaPredicted RBP6.56□□□□□ -1.36
SMARCA2-253ENST00000636758 ATF5Q9Y2D1 282 aaPredicted RBP6.56□□□□□ -1.36
SMARCA2-253ENST00000636758 APLP2Q06481 763 aa6.47□□□□□ -1.37
SMARCA2-253ENST00000636758 SPINK5Q9NQ38 1064 aaPredicted RBP6.47□□□□□ -1.37
SMARCA2-253ENST00000636758 CAPN15O75808 1086 aa6.45□□□□□ -1.38
SMARCA2-253ENST00000636758 TRHP20396 242 aaPredicted RBP6.45□□□□□ -1.38
SMARCA2-253ENST00000636758 ZNF219Q9P2Y4 722 aaPredicted RBP6.42□□□□□ -1.38
SMARCA2-253ENST00000636758 DSG3P32926 999 aa6.38□□□□□ -1.39
SMARCA2-253ENST00000636758 ABCB7O75027 752 aa6.34□□□□□ -1.39
SMARCA2-253ENST00000636758 POLA2Q14181 598 aa6.34□□□□□ -1.39
SMARCA2-253ENST00000636758 FKBP8Q14318 412 aa6.32□□□□□ -1.4
SMARCA2-253ENST00000636758 MKRN4PQ13434 485 aaPredicted RBP6.26□□□□□ -1.41
SMARCA2-253ENST00000636758 FBLN2P98095 1184 aa6.25□□□□□ -1.41
SMARCA2-253ENST00000636758 ZBTB12Q9Y330 459 aaPredicted RBP6.19□□□□□ -1.42
SMARCA2-253ENST00000636758 SPDYE4A6NLX3 237 aa6.18□□□□□ -1.42
SMARCA2-253ENST00000636758 OSCARQ8IYS5 282 aa6.13□□□□□ -1.43
SMARCA2-253ENST00000636758 ZNF692Q9BU19 519 aaPredicted RBP6.08□□□□□ -1.44
SMARCA2-253ENST00000636758 SPDYE2BA6NHP3 402 aa6.04□□□□□ -1.44
SMARCA2-253ENST00000636758 SPDYE6P0CI01 402 aa6.04□□□□□ -1.44
SMARCA2-253ENST00000636758 SPDYE2Q495Y8 402 aa6.04□□□□□ -1.44
SMARCA2-253ENST00000636758 PROM2Q8N271 834 aa6.03□□□□□ -1.44
SMARCA2-253ENST00000636758 RBM42Q9BTD8 480 aaKnown RBP6.03□□□□□ -1.44
SMARCA2-253ENST00000636758 POTEHQ6S545 545 aa6.02□□□□□ -1.45
SMARCA2-253ENST00000636758 PABPN1Q86U42 306 aaKnown RBP eCLIP6.01□□□□□ -1.45
SMARCA2-253ENST00000636758 FBXO3Q9UK99 471 aa6.01□□□□□ -1.45
SMARCA2-253ENST00000636758 SSUH2Q9Y2M2 353 aa6□□□□□ -1.45
SMARCA2-253ENST00000636758 VASPP50552 380 aaPredicted RBP5.95□□□□□ -1.46
SMARCA2-253ENST00000636758 RTN4Q9NQC3 1192 aaKnown RBP5.95□□□□□ -1.46
SMARCA2-253ENST00000636758 CHRDL2Q6WN34 429 aa5.93□□□□□ -1.46
SMARCA2-253ENST00000636758 AKT1S1Q96B36 256 aa5.93□□□□□ -1.46
SMARCA2-253ENST00000636758 AMER1Q5JTC6 1135 aaPredicted RBP5.92□□□□□ -1.46
SMARCA2-253ENST00000636758 REM2Q8IYK8 340 aaPredicted RBP5.9□□□□□ -1.46
SMARCA2-253ENST00000636758 IFNLR1Q8IU57 520 aaPredicted RBP5.89□□□□□ -1.47
SMARCA2-253ENST00000636758 CLEC11AQ9Y240 323 aa5.89□□□□□ -1.47
SMARCA2-253ENST00000636758 MIER1Q8N108 512 aa5.88□□□□□ -1.47
SMARCA2-253ENST00000636758 PLCD3Q8N3E9 789 aa5.88□□□□□ -1.47
SMARCA2-253ENST00000636758 STAG3Q9UJ98 1225 aa5.88□□□□□ -1.47
SMARCA2-253ENST00000636758 KLHL34Q8N239 644 aa5.87□□□□□ -1.47
SMARCA2-253ENST00000636758 PITPNM1O00562 1244 aa5.85□□□□□ -1.47
SMARCA2-253ENST00000636758 SPDYE1Q8NFV5 336 aaPredicted RBP5.85□□□□□ -1.47
SMARCA2-253ENST00000636758 PLEKHG5O94827 1062 aa5.81□□□□□ -1.48
SMARCA2-253ENST00000636758 PRR29P0C7W0 189 aa5.81□□□□□ -1.48
SMARCA2-253ENST00000636758 PIP4P2Q8N4L2 257 aa5.81□□□□□ -1.48
SMARCA2-253ENST00000636758 SPOCK2Q92563 424 aa5.78□□□□□ -1.48
SMARCA2-253ENST00000636758 FXR2P51116 673 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMARCA2-253ENST00000636758 ZBTB47Q9UFB7 747 aaPredicted RBP5.75□□□□□ -1.49
SMARCA2-253ENST00000636758 CREBZFQ9NS37 354 aa5.74□□□□□ -1.49
SMARCA2-253ENST00000636758 DCAF8L2P0C7V8 631 aa5.73□□□□□ -1.49
SMARCA2-253ENST00000636758 CHADLQ6NUI6 762 aa5.73□□□□□ -1.49
SMARCA2-253ENST00000636758 CIZ1Q9ULV3 898 aaPredicted RBP5.73□□□□□ -1.49
SMARCA2-253ENST00000636758 PKD2Q13563 968 aa5.72□□□□□ -1.49
SMARCA2-253ENST00000636758 ECM2O94769 699 aaPredicted RBP5.7□□□□□ -1.5
SMARCA2-253ENST00000636758 HAX1O00165 279 aa5.68□□□□□ -1.5
SMARCA2-253ENST00000636758 PRKAR2AP13861 404 aaKnown RBP5.68□□□□□ -1.5
SMARCA2-253ENST00000636758 MNX1P50219 401 aaPredicted RBP5.68□□□□□ -1.5
SMARCA2-253ENST00000636758 NUBP1P53384 320 aa5.66□□□□□ -1.5
SMARCA2-253ENST00000636758 EVX2Q03828 476 aa5.66□□□□□ -1.5
SMARCA2-253ENST00000636758 DCAF8Q5TAQ9 597 aa5.66□□□□□ -1.5
SMARCA2-253ENST00000636758 SP7Q8TDD2 431 aaPredicted RBP5.66□□□□□ -1.5
SMARCA2-253ENST00000636758 NPM1P06748 294 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMARCA2-253ENST00000636758 RASEFQ8IZ41 740 aa5.64□□□□□ -1.51
SMARCA2-253ENST00000636758 FAM212AQ96EL1 285 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms