RNA–Protein interactions for RNA: ENST00000636480.1

CACNA1D-210, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 3

Gene CACNA1D, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-210ENST00000636480 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
CACNA1D-210ENST00000636480 CHIC1Q5VXU3 224 aa17.18■□□□□ 0.34
CACNA1D-210ENST00000636480 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
CACNA1D-210ENST00000636480 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
CACNA1D-210ENST00000636480 FOXD1Q16676 465 aa14.13□□□□□ -0.15
CACNA1D-210ENST00000636480 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
CACNA1D-210ENST00000636480 PPP6R1Q9UPN7 881 aa13.36□□□□□ -0.27
CACNA1D-210ENST00000636480 ADRA2BP18089 450 aa13.32□□□□□ -0.28
CACNA1D-210ENST00000636480 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
CACNA1D-210ENST00000636480 MSH5O43196 834 aa13.17□□□□□ -0.3
CACNA1D-210ENST00000636480 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
CACNA1D-210ENST00000636480 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
CACNA1D-210ENST00000636480 MAPK8IP2Q13387 824 aaPredicted RBP12.15□□□□□ -0.46
CACNA1D-210ENST00000636480 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
CACNA1D-210ENST00000636480 DMRT2Q9Y5R5 561 aa12.11□□□□□ -0.47
CACNA1D-210ENST00000636480 CNKSR2Q8WXI2 1034 aa11.85□□□□□ -0.51
CACNA1D-210ENST00000636480 HOXD11P31277 338 aaPredicted RBP11.75□□□□□ -0.53
CACNA1D-210ENST00000636480 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
CACNA1D-210ENST00000636480 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
CACNA1D-210ENST00000636480 NPM3O75607 178 aaKnown RBP11.55□□□□□ -0.56
CACNA1D-210ENST00000636480 KCNA4P22459 653 aa11.51□□□□□ -0.57
CACNA1D-210ENST00000636480 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
CACNA1D-210ENST00000636480 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
CACNA1D-210ENST00000636480 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
CACNA1D-210ENST00000636480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.13□□□□□ -0.63
CACNA1D-210ENST00000636480 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
CACNA1D-210ENST00000636480 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
CACNA1D-210ENST00000636480 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
CACNA1D-210ENST00000636480 U3KPZ7 1027 aaPredicted RBP10.98□□□□□ -0.65
CACNA1D-210ENST00000636480 SLC4A1APQ9BWU0 796 aaKnown RBP10.9□□□□□ -0.66
CACNA1D-210ENST00000636480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.72□□□□□ -0.69
CACNA1D-210ENST00000636480 HNRNPUL2Q1KMD3 747 aaKnown RBP10.72□□□□□ -0.69
CACNA1D-210ENST00000636480 SPINK5Q9NQ38 1064 aaPredicted RBP10.72□□□□□ -0.69
CACNA1D-210ENST00000636480 MYCNP04198 464 aaPredicted RBP10.7□□□□□ -0.7
CACNA1D-210ENST00000636480 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
CACNA1D-210ENST00000636480 APLP2Q06481 763 aa10.68□□□□□ -0.7
CACNA1D-210ENST00000636480 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
CACNA1D-210ENST00000636480 CAPN15O75808 1086 aa10.66□□□□□ -0.7
CACNA1D-210ENST00000636480 ZBTB22O15209 634 aa10.61□□□□□ -0.71
CACNA1D-210ENST00000636480 DSG3P32926 999 aa10.6□□□□□ -0.71
CACNA1D-210ENST00000636480 ZNF219Q9P2Y4 722 aaPredicted RBP10.59□□□□□ -0.71
CACNA1D-210ENST00000636480 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
CACNA1D-210ENST00000636480 ABCB7O75027 752 aa10.44□□□□□ -0.74
CACNA1D-210ENST00000636480 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
CACNA1D-210ENST00000636480 ATXN8OSP0DMR3 200 aa10.36□□□□□ -0.75
CACNA1D-210ENST00000636480 POLA2Q14181 598 aa10.31□□□□□ -0.76
CACNA1D-210ENST00000636480 CSRNP3Q8WYN3 585 aa10.28□□□□□ -0.76
CACNA1D-210ENST00000636480 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
CACNA1D-210ENST00000636480 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
CACNA1D-210ENST00000636480 RBM42Q9BTD8 480 aaKnown RBP10.12□□□□□ -0.79
CACNA1D-210ENST00000636480 OSCARQ8IYS5 282 aa10.01□□□□□ -0.81
CACNA1D-210ENST00000636480 FBLN2P98095 1184 aa9.98□□□□□ -0.81
CACNA1D-210ENST00000636480 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
CACNA1D-210ENST00000636480 AKT1S1Q96B36 256 aa9.93□□□□□ -0.82
CACNA1D-210ENST00000636480 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
CACNA1D-210ENST00000636480 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
CACNA1D-210ENST00000636480 SPDYE2Q495Y8 402 aa9.88□□□□□ -0.83
CACNA1D-210ENST00000636480 POTEHQ6S545 545 aa9.81□□□□□ -0.84
CACNA1D-210ENST00000636480 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
CACNA1D-210ENST00000636480 CHRDL2Q6WN34 429 aa9.8□□□□□ -0.84
CACNA1D-210ENST00000636480 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
CACNA1D-210ENST00000636480 ZNF692Q9BU19 519 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-210ENST00000636480 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
CACNA1D-210ENST00000636480 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
CACNA1D-210ENST00000636480 PABPN1Q86U42 306 aaKnown RBP eCLIP9.62□□□□□ -0.87
CACNA1D-210ENST00000636480 PIP4P2Q8N4L2 257 aa9.62□□□□□ -0.87
CACNA1D-210ENST00000636480 FXR2P51116 673 aaKnown RBP eCLIP9.6□□□□□ -0.87
CACNA1D-210ENST00000636480 SPDYE4A6NLX3 237 aa9.57□□□□□ -0.88
CACNA1D-210ENST00000636480 CLEC11AQ9Y240 323 aa9.55□□□□□ -0.88
CACNA1D-210ENST00000636480 PROM2Q8N271 834 aa9.45□□□□□ -0.9
CACNA1D-210ENST00000636480 PRR29P0C7W0 189 aa9.44□□□□□ -0.9
CACNA1D-210ENST00000636480 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
CACNA1D-210ENST00000636480 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
CACNA1D-210ENST00000636480 CHADLQ6NUI6 762 aa9.36□□□□□ -0.91
CACNA1D-210ENST00000636480 HAX1O00165 279 aa9.32□□□□□ -0.92
CACNA1D-210ENST00000636480 SP7Q8TDD2 431 aaPredicted RBP9.31□□□□□ -0.92
CACNA1D-210ENST00000636480 C19orf67A6NJJ6 358 aa9.3□□□□□ -0.92
CACNA1D-210ENST00000636480 FKBP8Q14318 412 aa9.3□□□□□ -0.92
CACNA1D-210ENST00000636480 CREBZFQ9NS37 354 aa9.3□□□□□ -0.92
CACNA1D-210ENST00000636480 FARP1Q9Y4F1 1045 aaPredicted RBP9.28□□□□□ -0.92
CACNA1D-210ENST00000636480 EVX2Q03828 476 aa9.25□□□□□ -0.93
CACNA1D-210ENST00000636480 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
CACNA1D-210ENST00000636480 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
CACNA1D-210ENST00000636480 NPM1P06748 294 aaKnown RBP eCLIP9.11□□□□□ -0.95
CACNA1D-210ENST00000636480 ZNF579Q8NAF0 562 aaKnown RBP9.08□□□□□ -0.96
CACNA1D-210ENST00000636480 GABBR2O75899 941 aa9.07□□□□□ -0.96
CACNA1D-210ENST00000636480 PLEKHG5O94827 1062 aa9.05□□□□□ -0.96
CACNA1D-210ENST00000636480 MIER1Q8N108 512 aa9.05□□□□□ -0.96
CACNA1D-210ENST00000636480 ZRANB1Q9UGI0 708 aa9.05□□□□□ -0.96
CACNA1D-210ENST00000636480 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
CACNA1D-210ENST00000636480 CLCN6P51797 869 aa9.04□□□□□ -0.96
CACNA1D-210ENST00000636480 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
CACNA1D-210ENST00000636480 PLCD3Q8N3E9 789 aa9.03□□□□□ -0.96
CACNA1D-210ENST00000636480 ZBTB47Q9UFB7 747 aaPredicted RBP8.99□□□□□ -0.97
CACNA1D-210ENST00000636480 VASPP50552 380 aaPredicted RBP8.97□□□□□ -0.97
CACNA1D-210ENST00000636480 PHF12Q96QT6 1004 aa8.97□□□□□ -0.97
CACNA1D-210ENST00000636480 RASEFQ8IZ41 740 aa8.95□□□□□ -0.98
CACNA1D-210ENST00000636480 CCDC61Q9Y6R9 512 aa8.94□□□□□ -0.98
CACNA1D-210ENST00000636480 NUBP1P53384 320 aa8.93□□□□□ -0.98
CACNA1D-210ENST00000636480 TSPYL2Q9H2G4 693 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms