RNA–Protein interactions for RNA: ENST00000636233.1

SMARCA2-249, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-249ENST00000636233 AEBP2Q6ZN18 517 aaPredicted RBP6.12□□□□□ -1.43
SMARCA2-249ENST00000636233 CHIC1Q5VXU3 224 aa5.67□□□□□ -1.5
SMARCA2-249ENST00000636233 POTEDQ86YR6 584 aa5.49□□□□□ -1.53
SMARCA2-249ENST00000636233 SENP3Q9H4L4 574 aaPredicted RBP5.26□□□□□ -1.57
SMARCA2-249ENST00000636233 PHF23Q9BUL5 403 aaPredicted RBP5.14□□□□□ -1.59
SMARCA2-249ENST00000636233 FOXD1Q16676 465 aa4.98□□□□□ -1.61
SMARCA2-249ENST00000636233 MSH5O43196 834 aa4.82□□□□□ -1.64
SMARCA2-249ENST00000636233 PLPPR3Q6T4P5 718 aa4.66□□□□□ -1.66
SMARCA2-249ENST00000636233 PIAS4Q8N2W9 510 aaPredicted RBP4.51□□□□□ -1.69
SMARCA2-249ENST00000636233 CACNB1Q02641 598 aaPredicted RBP4.39□□□□□ -1.71
SMARCA2-249ENST00000636233 ADRA2BP18089 450 aa4.35□□□□□ -1.71
SMARCA2-249ENST00000636233 PPP6R1Q9UPN7 881 aa4.34□□□□□ -1.71
SMARCA2-249ENST00000636233 POTEHQ6S545 545 aa4.2□□□□□ -1.74
SMARCA2-249ENST00000636233 DMRT2Q9Y5R5 561 aa4.12□□□□□ -1.75
SMARCA2-249ENST00000636233 PPP4R3CPQ6ZMV5 832 aa4.09□□□□□ -1.75
SMARCA2-249ENST00000636233 RNF39Q9H2S5 420 aa4.08□□□□□ -1.76
SMARCA2-249ENST00000636233 SCAF1Q9H7N4 1312 aaKnown RBP4.08□□□□□ -1.76
SMARCA2-249ENST00000636233 MAPK8IP2Q13387 824 aaPredicted RBP4.05□□□□□ -1.76
SMARCA2-249ENST00000636233 NCBP3Q53F19 620 aaKnown RBP4.05□□□□□ -1.76
SMARCA2-249ENST00000636233 KCNA4P22459 653 aa4.02□□□□□ -1.77
SMARCA2-249ENST00000636233 C1QBPQ07021 282 aaKnown RBP3.99□□□□□ -1.77
SMARCA2-249ENST00000636233 CNKSR2Q8WXI2 1034 aa3.98□□□□□ -1.77
SMARCA2-249ENST00000636233 NPM3O75607 178 aaKnown RBP3.93□□□□□ -1.78
SMARCA2-249ENST00000636233 DCAF8L1A6NGE4 600 aa3.91□□□□□ -1.78
SMARCA2-249ENST00000636233 RNF216Q9NWF9 866 aaPredicted RBP3.89□□□□□ -1.79
SMARCA2-249ENST00000636233 SLC4A1APQ9BWU0 796 aaKnown RBP3.87□□□□□ -1.79
SMARCA2-249ENST00000636233 HOXD11P31277 338 aaPredicted RBP3.84□□□□□ -1.79
SMARCA2-249ENST00000636233 DNAJC5BQ9UF47 199 aa3.83□□□□□ -1.8
SMARCA2-249ENST00000636233 EHMT2Q96KQ7 1210 aa3.8□□□□□ -1.8
SMARCA2-249ENST00000636233 FOXD4L1Q9NU39 408 aa3.73□□□□□ -1.81
SMARCA2-249ENST00000636233 SP7Q8TDD2 431 aaPredicted RBP3.72□□□□□ -1.81
SMARCA2-249ENST00000636233 CSRNP3Q8WYN3 585 aa3.72□□□□□ -1.81
SMARCA2-249ENST00000636233 ZBTB22O15209 634 aa3.68□□□□□ -1.82
SMARCA2-249ENST00000636233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMARCA2-249ENST00000636233 SLC4A2P04920 1241 aa3.67□□□□□ -1.82
SMARCA2-249ENST00000636233 DSG3P32926 999 aa3.67□□□□□ -1.82
SMARCA2-249ENST00000636233 MYCNP04198 464 aaPredicted RBP3.66□□□□□ -1.82
SMARCA2-249ENST00000636233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.64□□□□□ -1.83
SMARCA2-249ENST00000636233 HNRNPUL2Q1KMD3 747 aaKnown RBP3.64□□□□□ -1.83
SMARCA2-249ENST00000636233 ATXN8OSP0DMR3 200 aa3.62□□□□□ -1.83
SMARCA2-249ENST00000636233 APLP2Q06481 763 aa3.62□□□□□ -1.83
SMARCA2-249ENST00000636233 PLSCR2Q9NRY7 297 aa3.62□□□□□ -1.83
SMARCA2-249ENST00000636233 SAMD1Q6SPF0 538 aaPredicted RBP3.61□□□□□ -1.83
SMARCA2-249ENST00000636233 CHRDL2Q6WN34 429 aa3.6□□□□□ -1.83
SMARCA2-249ENST00000636233 U3KPZ7 1027 aaPredicted RBP3.59□□□□□ -1.83
SMARCA2-249ENST00000636233 SPINK5Q9NQ38 1064 aaPredicted RBP3.56□□□□□ -1.84
SMARCA2-249ENST00000636233 CAPN15O75808 1086 aa3.54□□□□□ -1.84
SMARCA2-249ENST00000636233 ZNF219Q9P2Y4 722 aaPredicted RBP3.51□□□□□ -1.85
SMARCA2-249ENST00000636233 ATF5Q9Y2D1 282 aaPredicted RBP3.49□□□□□ -1.85
SMARCA2-249ENST00000636233 TRHP20396 242 aaPredicted RBP3.48□□□□□ -1.85
SMARCA2-249ENST00000636233 LHX8Q68G74 356 aa3.48□□□□□ -1.85
SMARCA2-249ENST00000636233 RBM42Q9BTD8 480 aaKnown RBP3.48□□□□□ -1.85
SMARCA2-249ENST00000636233 HAX1O00165 279 aa3.45□□□□□ -1.86
SMARCA2-249ENST00000636233 ABCB7O75027 752 aa3.43□□□□□ -1.86
SMARCA2-249ENST00000636233 FBLN2P98095 1184 aa3.43□□□□□ -1.86
SMARCA2-249ENST00000636233 POLA2Q14181 598 aa3.43□□□□□ -1.86
SMARCA2-249ENST00000636233 PIP4P2Q8N4L2 257 aa3.43□□□□□ -1.86
SMARCA2-249ENST00000636233 ZBTB12Q9Y330 459 aaPredicted RBP3.43□□□□□ -1.86
SMARCA2-249ENST00000636233 EVX2Q03828 476 aa3.42□□□□□ -1.86
SMARCA2-249ENST00000636233 FKBP8Q14318 412 aa3.39□□□□□ -1.87
SMARCA2-249ENST00000636233 FXR2P51116 673 aaKnown RBP eCLIP3.35□□□□□ -1.87
SMARCA2-249ENST00000636233 SPDYE4A6NLX3 237 aa3.34□□□□□ -1.87
SMARCA2-249ENST00000636233 MKRN4PQ13434 485 aaPredicted RBP3.34□□□□□ -1.87
SMARCA2-249ENST00000636233 SPDYE2BA6NHP3 402 aa3.32□□□□□ -1.88
SMARCA2-249ENST00000636233 SPDYE6P0CI01 402 aa3.32□□□□□ -1.88
SMARCA2-249ENST00000636233 SPDYE2Q495Y8 402 aa3.32□□□□□ -1.88
SMARCA2-249ENST00000636233 AKT1S1Q96B36 256 aa3.32□□□□□ -1.88
SMARCA2-249ENST00000636233 GABBR2O75899 941 aa3.31□□□□□ -1.88
SMARCA2-249ENST00000636233 ZNF692Q9BU19 519 aaPredicted RBP3.31□□□□□ -1.88
SMARCA2-249ENST00000636233 FBXO3Q9UK99 471 aa3.31□□□□□ -1.88
SMARCA2-249ENST00000636233 POTEMA6NI47 508 aa3.3□□□□□ -1.88
SMARCA2-249ENST00000636233 OSCARQ8IYS5 282 aa3.3□□□□□ -1.88
SMARCA2-249ENST00000636233 REM2Q8IYK8 340 aaPredicted RBP3.29□□□□□ -1.88
SMARCA2-249ENST00000636233 PROM2Q8N271 834 aa3.28□□□□□ -1.88
SMARCA2-249ENST00000636233 PITPNM1O00562 1244 aa3.27□□□□□ -1.89
SMARCA2-249ENST00000636233 POTEGQ6S5H5 508 aa3.27□□□□□ -1.89
SMARCA2-249ENST00000636233 PCDH10Q9P2E7 1040 aa3.27□□□□□ -1.89
SMARCA2-249ENST00000636233 SSUH2Q9Y2M2 353 aa3.27□□□□□ -1.89
SMARCA2-249ENST00000636233 C19orf67A6NJJ6 358 aa3.26□□□□□ -1.89
SMARCA2-249ENST00000636233 STAG3Q9UJ98 1225 aa3.26□□□□□ -1.89
SMARCA2-249ENST00000636233 POTEIP0CG38 1075 aa3.25□□□□□ -1.89
SMARCA2-249ENST00000636233 PABPN1Q86U42 306 aaKnown RBP eCLIP3.25□□□□□ -1.89
SMARCA2-249ENST00000636233 PLEKHG5O94827 1062 aa3.22□□□□□ -1.89
SMARCA2-249ENST00000636233 AMER1Q5JTC6 1135 aaPredicted RBP3.22□□□□□ -1.89
SMARCA2-249ENST00000636233 VASPP50552 380 aaPredicted RBP3.21□□□□□ -1.9
SMARCA2-249ENST00000636233 OTUD5Q96G74 571 aa3.21□□□□□ -1.9
SMARCA2-249ENST00000636233 SPDYE1Q8NFV5 336 aaPredicted RBP3.2□□□□□ -1.9
SMARCA2-249ENST00000636233 PLCD3Q8N3E9 789 aa3.19□□□□□ -1.9
SMARCA2-249ENST00000636233 ZBTB47Q9UFB7 747 aaPredicted RBP3.19□□□□□ -1.9
SMARCA2-249ENST00000636233 MIER1Q8N108 512 aa3.18□□□□□ -1.9
SMARCA2-249ENST00000636233 PRR29P0C7W0 189 aa3.17□□□□□ -1.9
SMARCA2-249ENST00000636233 KLHL34Q8N239 644 aa3.17□□□□□ -1.9
SMARCA2-249ENST00000636233 CLEC11AQ9Y240 323 aa3.17□□□□□ -1.9
SMARCA2-249ENST00000636233 PRKAR2AP13861 404 aaKnown RBP3.16□□□□□ -1.9
SMARCA2-249ENST00000636233 IFNLR1Q8IU57 520 aaPredicted RBP3.15□□□□□ -1.91
SMARCA2-249ENST00000636233 LCE2DQ5TA82 110 aaPredicted RBP3.14□□□□□ -1.91
SMARCA2-249ENST00000636233 SPOCK2Q92563 424 aa3.14□□□□□ -1.91
SMARCA2-249ENST00000636233 RTN4Q9NQC3 1192 aaKnown RBP3.14□□□□□ -1.91
SMARCA2-249ENST00000636233 POTEB2H3BUK9 544 aa3.13□□□□□ -1.91
SMARCA2-249ENST00000636233 NPM1P06748 294 aaKnown RBP eCLIP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms