RNA–Protein interactions for RNA: ENST00000636025.1

CHML-202, Transcript of CHM like, Rab escort protein 2, humanhuman

TSL 4

Gene CHML, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-202ENST00000636025 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
CHML-202ENST00000636025 CHIC1Q5VXU3 224 aa29.09■■■□□ 2.25
CHML-202ENST00000636025 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
CHML-202ENST00000636025 PHF23Q9BUL5 403 aaPredicted RBP25.5■■□□□ 1.67
CHML-202ENST00000636025 FOXD1Q16676 465 aa23.76■■□□□ 1.39
CHML-202ENST00000636025 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
CHML-202ENST00000636025 PPP6R1Q9UPN7 881 aa22.58■■□□□ 1.21
CHML-202ENST00000636025 ADRA2BP18089 450 aa22.54■■□□□ 1.2
CHML-202ENST00000636025 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
CHML-202ENST00000636025 MSH5O43196 834 aa22.1■■□□□ 1.13
CHML-202ENST00000636025 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
CHML-202ENST00000636025 PPP4R3CPQ6ZMV5 832 aa20.63■□□□□ 0.89
CHML-202ENST00000636025 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
CHML-202ENST00000636025 MAPK8IP2Q13387 824 aaPredicted RBP20.53■□□□□ 0.88
CHML-202ENST00000636025 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
CHML-202ENST00000636025 CNKSR2Q8WXI2 1034 aa20.16■□□□□ 0.82
CHML-202ENST00000636025 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
CHML-202ENST00000636025 HOXD11P31277 338 aaPredicted RBP19.85■□□□□ 0.77
CHML-202ENST00000636025 RNF216Q9NWF9 866 aaPredicted RBP19.85■□□□□ 0.77
CHML-202ENST00000636025 KCNA4P22459 653 aa19.77■□□□□ 0.76
CHML-202ENST00000636025 NPM3O75607 178 aaKnown RBP19.71■□□□□ 0.75
CHML-202ENST00000636025 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
CHML-202ENST00000636025 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
CHML-202ENST00000636025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHML-202ENST00000636025 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
CHML-202ENST00000636025 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
CHML-202ENST00000636025 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
CHML-202ENST00000636025 C1QBPQ07021 282 aaKnown RBP18.65■□□□□ 0.58
CHML-202ENST00000636025 CACNB1Q02641 598 aaPredicted RBP18.59■□□□□ 0.57
CHML-202ENST00000636025 U3KPZ7 1027 aaPredicted RBP18.56■□□□□ 0.56
CHML-202ENST00000636025 FOXD4L1Q9NU39 408 aa18.34■□□□□ 0.53
CHML-202ENST00000636025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
CHML-202ENST00000636025 MYCNP04198 464 aaPredicted RBP18.26■□□□□ 0.51
CHML-202ENST00000636025 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
CHML-202ENST00000636025 ZBTB22O15209 634 aa18.18■□□□□ 0.5
CHML-202ENST00000636025 APLP2Q06481 763 aa18.17■□□□□ 0.5
CHML-202ENST00000636025 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
CHML-202ENST00000636025 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
CHML-202ENST00000636025 CAPN15O75808 1086 aa18.06■□□□□ 0.48
CHML-202ENST00000636025 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
CHML-202ENST00000636025 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
CHML-202ENST00000636025 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
CHML-202ENST00000636025 DSG3P32926 999 aa17.84■□□□□ 0.45
CHML-202ENST00000636025 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
CHML-202ENST00000636025 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
CHML-202ENST00000636025 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
CHML-202ENST00000636025 ABCB7O75027 752 aa17.67■□□□□ 0.42
CHML-202ENST00000636025 POLA2Q14181 598 aa17.52■□□□□ 0.4
CHML-202ENST00000636025 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
CHML-202ENST00000636025 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
CHML-202ENST00000636025 FBLN2P98095 1184 aa17.06■□□□□ 0.32
CHML-202ENST00000636025 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
CHML-202ENST00000636025 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
CHML-202ENST00000636025 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
CHML-202ENST00000636025 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
CHML-202ENST00000636025 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
CHML-202ENST00000636025 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
CHML-202ENST00000636025 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
CHML-202ENST00000636025 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
CHML-202ENST00000636025 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
CHML-202ENST00000636025 SPDYE4A6NLX3 237 aa16.44■□□□□ 0.22
CHML-202ENST00000636025 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
CHML-202ENST00000636025 PITPNM1O00562 1244 aa16.39■□□□□ 0.21
CHML-202ENST00000636025 PABPN1Q86U42 306 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHML-202ENST00000636025 SPDYE1Q8NFV5 336 aaPredicted RBP16.35■□□□□ 0.21
CHML-202ENST00000636025 POTEHQ6S545 545 aa16.28■□□□□ 0.2
CHML-202ENST00000636025 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
CHML-202ENST00000636025 FXR2P51116 673 aaKnown RBP eCLIP16.16■□□□□ 0.18
CHML-202ENST00000636025 PROM2Q8N271 834 aa16.16■□□□□ 0.18
CHML-202ENST00000636025 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
CHML-202ENST00000636025 FKBP8Q14318 412 aa16.14■□□□□ 0.17
CHML-202ENST00000636025 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
CHML-202ENST00000636025 PRR29P0C7W0 189 aa16.08■□□□□ 0.16
CHML-202ENST00000636025 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
CHML-202ENST00000636025 CHADLQ6NUI6 762 aa15.88■□□□□ 0.13
CHML-202ENST00000636025 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
CHML-202ENST00000636025 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
CHML-202ENST00000636025 HAX1O00165 279 aa15.7■□□□□ 0.1
CHML-202ENST00000636025 FBXO3Q9UK99 471 aa15.7■□□□□ 0.1
CHML-202ENST00000636025 C19orf67A6NJJ6 358 aa15.62■□□□□ 0.09
CHML-202ENST00000636025 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
CHML-202ENST00000636025 MNX1P50219 401 aaPredicted RBP15.6■□□□□ 0.09
CHML-202ENST00000636025 MIER1Q8N108 512 aa15.59■□□□□ 0.09
CHML-202ENST00000636025 PLCD3Q8N3E9 789 aa15.56■□□□□ 0.08
CHML-202ENST00000636025 NPM1P06748 294 aaKnown RBP eCLIP15.55■□□□□ 0.08
CHML-202ENST00000636025 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
CHML-202ENST00000636025 CD44P16070 742 aaKnown RBP15.51■□□□□ 0.07
CHML-202ENST00000636025 EVX2Q03828 476 aa15.51■□□□□ 0.07
CHML-202ENST00000636025 VASPP50552 380 aaPredicted RBP15.48■□□□□ 0.07
CHML-202ENST00000636025 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
CHML-202ENST00000636025 PAK3O75914 559 aaPredicted RBP15.39■□□□□ 0.05
CHML-202ENST00000636025 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
CHML-202ENST00000636025 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
CHML-202ENST00000636025 CLCN6P51797 869 aa15.26■□□□□ 0.03
CHML-202ENST00000636025 NUBP1P53384 320 aa15.26■□□□□ 0.03
CHML-202ENST00000636025 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
CHML-202ENST00000636025 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
CHML-202ENST00000636025 GABBR2O75899 941 aa15.24■□□□□ 0.03
CHML-202ENST00000636025 TSPYL2Q9H2G4 693 aaPredicted RBP15.23■□□□□ 0.03
CHML-202ENST00000636025 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms