RNA–Protein interactions for RNA: ENST00000635953.1

LGI1-217, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 5

Gene LGI1, Length 2,430 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-217ENST00000635953 CHIC1Q5VXU3 224 aa15.08■□□□□ 0.01
LGI1-217ENST00000635953 AEBP2Q6ZN18 517 aaPredicted RBP14.97□□□□□ -0.01
LGI1-217ENST00000635953 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
LGI1-217ENST00000635953 SENP3Q9H4L4 574 aaPredicted RBP12.6□□□□□ -0.39
LGI1-217ENST00000635953 PLPPR3Q6T4P5 718 aa12.45□□□□□ -0.42
LGI1-217ENST00000635953 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
LGI1-217ENST00000635953 ADRA2BP18089 450 aa11.67□□□□□ -0.54
LGI1-217ENST00000635953 FOXD1Q16676 465 aa11.65□□□□□ -0.54
LGI1-217ENST00000635953 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
LGI1-217ENST00000635953 KCNA4P22459 653 aa11.35□□□□□ -0.59
LGI1-217ENST00000635953 EHMT2Q96KQ7 1210 aa11.13□□□□□ -0.63
LGI1-217ENST00000635953 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
LGI1-217ENST00000635953 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
LGI1-217ENST00000635953 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
LGI1-217ENST00000635953 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
LGI1-217ENST00000635953 MSH5O43196 834 aa10.85□□□□□ -0.67
LGI1-217ENST00000635953 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
LGI1-217ENST00000635953 NPM3O75607 178 aaKnown RBP10.74□□□□□ -0.69
LGI1-217ENST00000635953 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
LGI1-217ENST00000635953 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
LGI1-217ENST00000635953 ZBTB22O15209 634 aa10.47□□□□□ -0.73
LGI1-217ENST00000635953 MAPK8IP2Q13387 824 aaPredicted RBP10.39□□□□□ -0.75
LGI1-217ENST00000635953 DNAJC5BQ9UF47 199 aa10.36□□□□□ -0.75
LGI1-217ENST00000635953 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
LGI1-217ENST00000635953 RNF216Q9NWF9 866 aaPredicted RBP10.29□□□□□ -0.76
LGI1-217ENST00000635953 DMRT2Q9Y5R5 561 aa10.15□□□□□ -0.79
LGI1-217ENST00000635953 HOXD11P31277 338 aaPredicted RBP10.13□□□□□ -0.79
LGI1-217ENST00000635953 SLC4A2P04920 1241 aa10.03□□□□□ -0.8
LGI1-217ENST00000635953 MYCNP04198 464 aaPredicted RBP9.9□□□□□ -0.82
LGI1-217ENST00000635953 ATXN8OSP0DMR3 200 aa9.88□□□□□ -0.83
LGI1-217ENST00000635953 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
LGI1-217ENST00000635953 FKBP8Q14318 412 aa9.71□□□□□ -0.85
LGI1-217ENST00000635953 RTN4Q9NQC3 1192 aaKnown RBP9.71□□□□□ -0.85
LGI1-217ENST00000635953 AMER1Q5JTC6 1135 aaPredicted RBP9.7□□□□□ -0.86
LGI1-217ENST00000635953 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.86
LGI1-217ENST00000635953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
LGI1-217ENST00000635953 ATF5Q9Y2D1 282 aaPredicted RBP9.62□□□□□ -0.87
LGI1-217ENST00000635953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.57□□□□□ -0.88
LGI1-217ENST00000635953 HNRNPUL2Q1KMD3 747 aaKnown RBP9.57□□□□□ -0.88
LGI1-217ENST00000635953 SAMD1Q6SPF0 538 aaPredicted RBP9.57□□□□□ -0.88
LGI1-217ENST00000635953 U3KPZ7 1027 aaPredicted RBP9.56□□□□□ -0.88
LGI1-217ENST00000635953 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
LGI1-217ENST00000635953 ZNF219Q9P2Y4 722 aaPredicted RBP9.4□□□□□ -0.91
LGI1-217ENST00000635953 APLP2Q06481 763 aa9.35□□□□□ -0.91
LGI1-217ENST00000635953 RNF39Q9H2S5 420 aa9.31□□□□□ -0.92
LGI1-217ENST00000635953 SPDYE4A6NLX3 237 aa9.24□□□□□ -0.93
LGI1-217ENST00000635953 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
LGI1-217ENST00000635953 FBXO3Q9UK99 471 aa9.22□□□□□ -0.93
LGI1-217ENST00000635953 POTEHQ6S545 545 aa9.2□□□□□ -0.94
LGI1-217ENST00000635953 PROM2Q8N271 834 aa9.18□□□□□ -0.94
LGI1-217ENST00000635953 FBLN2P98095 1184 aa9.15□□□□□ -0.94
LGI1-217ENST00000635953 SPINK5Q9NQ38 1064 aaPredicted RBP9.15□□□□□ -0.94
LGI1-217ENST00000635953 TRHP20396 242 aaPredicted RBP9.14□□□□□ -0.95
LGI1-217ENST00000635953 POLA2Q14181 598 aa9.11□□□□□ -0.95
LGI1-217ENST00000635953 VASPP50552 380 aaPredicted RBP9.1□□□□□ -0.95
LGI1-217ENST00000635953 CAPN15O75808 1086 aa9.06□□□□□ -0.96
LGI1-217ENST00000635953 C1QBPQ07021 282 aaKnown RBP9.03□□□□□ -0.96
LGI1-217ENST00000635953 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.97
LGI1-217ENST00000635953 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
LGI1-217ENST00000635953 ABCB7O75027 752 aa8.95□□□□□ -0.98
LGI1-217ENST00000635953 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
LGI1-217ENST00000635953 PKD2Q13563 968 aa8.91□□□□□ -0.98
LGI1-217ENST00000635953 DCAF8L2P0C7V8 631 aa8.88□□□□□ -0.99
LGI1-217ENST00000635953 ZNF692Q9BU19 519 aaPredicted RBP8.83□□□□□ -1
LGI1-217ENST00000635953 DSG3P32926 999 aa8.82□□□□□ -1
LGI1-217ENST00000635953 HAP1P54257 671 aaPredicted RBP8.82□□□□□ -1
LGI1-217ENST00000635953 SPOCK2Q92563 424 aa8.82□□□□□ -1
LGI1-217ENST00000635953 KLHL34Q8N239 644 aa8.81□□□□□ -1
LGI1-217ENST00000635953 STAG3Q9UJ98 1225 aa8.8□□□□□ -1
LGI1-217ENST00000635953 SPDYE2BA6NHP3 402 aa8.79□□□□□ -1
LGI1-217ENST00000635953 SPDYE6P0CI01 402 aa8.79□□□□□ -1
LGI1-217ENST00000635953 SPDYE2Q495Y8 402 aa8.79□□□□□ -1
LGI1-217ENST00000635953 OSCARQ8IYS5 282 aa8.79□□□□□ -1
LGI1-217ENST00000635953 SSUH2Q9Y2M2 353 aa8.79□□□□□ -1
LGI1-217ENST00000635953 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
LGI1-217ENST00000635953 PABPN1Q86U42 306 aaKnown RBP eCLIP8.73□□□□□ -1.01
LGI1-217ENST00000635953 PLCD3Q8N3E9 789 aa8.73□□□□□ -1.01
LGI1-217ENST00000635953 BBXQ8WY36 941 aaPredicted RBP8.71□□□□□ -1.02
LGI1-217ENST00000635953 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
LGI1-217ENST00000635953 MIER1Q8N108 512 aa8.69□□□□□ -1.02
LGI1-217ENST00000635953 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
LGI1-217ENST00000635953 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.68□□□□□ -1.02
LGI1-217ENST00000635953 RGL2O15211 777 aa8.66□□□□□ -1.02
LGI1-217ENST00000635953 BCANQ96GW7 911 aa8.64□□□□□ -1.03
LGI1-217ENST00000635953 PAXIP1Q6ZW49 1069 aaPredicted RBP8.63□□□□□ -1.03
LGI1-217ENST00000635953 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
LGI1-217ENST00000635953 ZBTB47Q9UFB7 747 aaPredicted RBP8.6□□□□□ -1.03
LGI1-217ENST00000635953 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
LGI1-217ENST00000635953 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
LGI1-217ENST00000635953 CIZ1Q9ULV3 898 aaPredicted RBP8.59□□□□□ -1.03
LGI1-217ENST00000635953 SPRYD3Q8NCJ5 442 aa8.55□□□□□ -1.04
LGI1-217ENST00000635953 CHGAP10645 457 aaKnown RBP8.53□□□□□ -1.04
LGI1-217ENST00000635953 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
LGI1-217ENST00000635953 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
LGI1-217ENST00000635953 PRKCSHP14314 528 aaPredicted RBP8.51□□□□□ -1.05
LGI1-217ENST00000635953 TSHZ2Q9NRE2 1034 aa8.5□□□□□ -1.05
LGI1-217ENST00000635953 GSE1Q14687 1217 aa8.46□□□□□ -1.05
LGI1-217ENST00000635953 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.05
LGI1-217ENST00000635953 NUBP1P53384 320 aa8.45□□□□□ -1.06
LGI1-217ENST00000635953 RNF25Q96BH1 459 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms