RNA–Protein interactions for RNA: ENST00000635009.1

LINC01778-206, Transcript of long intergenic non-protein coding RNA 1778, humanhuman

TSL 5

Gene LINC01778, Length 1,235 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01778-206ENST00000635009 AEBP2Q6ZN18 517 aaPredicted RBP34.87■■■■□ 3.17
LINC01778-206ENST00000635009 CHIC1Q5VXU3 224 aa33.92■■■■□ 3.02
LINC01778-206ENST00000635009 PHF23Q9BUL5 403 aaPredicted RBP29.82■■■□□ 2.36
LINC01778-206ENST00000635009 SENP3Q9H4L4 574 aaPredicted RBP29.62■■■□□ 2.33
LINC01778-206ENST00000635009 FOXD1Q16676 465 aa27.5■■□□□ 1.99
LINC01778-206ENST00000635009 PLPPR3Q6T4P5 718 aa27.5■■□□□ 1.99
LINC01778-206ENST00000635009 PPP6R1Q9UPN7 881 aa26.35■■□□□ 1.81
LINC01778-206ENST00000635009 ADRA2BP18089 450 aa26.34■■□□□ 1.81
LINC01778-206ENST00000635009 PIAS4Q8N2W9 510 aaPredicted RBP25.94■■□□□ 1.74
LINC01778-206ENST00000635009 MSH5O43196 834 aa25.42■■□□□ 1.66
LINC01778-206ENST00000635009 PPP4R3CPQ6ZMV5 832 aa24.22■■□□□ 1.47
LINC01778-206ENST00000635009 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
LINC01778-206ENST00000635009 MAPK8IP2Q13387 824 aaPredicted RBP23.93■■□□□ 1.42
LINC01778-206ENST00000635009 DMRT2Q9Y5R5 561 aa23.61■■□□□ 1.37
LINC01778-206ENST00000635009 POTEDQ86YR6 584 aa23.58■■□□□ 1.37
LINC01778-206ENST00000635009 CNKSR2Q8WXI2 1034 aa23.56■■□□□ 1.36
LINC01778-206ENST00000635009 NCBP3Q53F19 620 aaKnown RBP23.54■■□□□ 1.36
LINC01778-206ENST00000635009 KCNA4P22459 653 aa23.52■■□□□ 1.36
LINC01778-206ENST00000635009 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
LINC01778-206ENST00000635009 RNF216Q9NWF9 866 aaPredicted RBP23.13■■□□□ 1.29
LINC01778-206ENST00000635009 HOXD11P31277 338 aaPredicted RBP23.06■■□□□ 1.28
LINC01778-206ENST00000635009 DCAF8L1A6NGE4 600 aa22.65■■□□□ 1.22
LINC01778-206ENST00000635009 DNAJC5BQ9UF47 199 aa22.49■■□□□ 1.19
LINC01778-206ENST00000635009 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
LINC01778-206ENST00000635009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.02■■□□□ 1.12
LINC01778-206ENST00000635009 SLC4A2P04920 1241 aa21.93■■□□□ 1.1
LINC01778-206ENST00000635009 RNF39Q9H2S5 420 aa21.76■■□□□ 1.07
LINC01778-206ENST00000635009 FOXD4L1Q9NU39 408 aa21.68■■□□□ 1.06
LINC01778-206ENST00000635009 ZBTB22O15209 634 aa21.64■■□□□ 1.05
LINC01778-206ENST00000635009 U3KPZ7 1027 aaPredicted RBP21.63■■□□□ 1.05
LINC01778-206ENST00000635009 EHMT2Q96KQ7 1210 aa21.62■■□□□ 1.05
LINC01778-206ENST00000635009 C1QBPQ07021 282 aaKnown RBP21.48■■□□□ 1.03
LINC01778-206ENST00000635009 MYCNP04198 464 aaPredicted RBP21.46■■□□□ 1.03
LINC01778-206ENST00000635009 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
LINC01778-206ENST00000635009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.31■■□□□ 1
LINC01778-206ENST00000635009 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
LINC01778-206ENST00000635009 HNRNPUL2Q1KMD3 747 aaKnown RBP21.31■■□□□ 1
LINC01778-206ENST00000635009 SAMD1Q6SPF0 538 aaPredicted RBP21.23■□□□□ 0.99
LINC01778-206ENST00000635009 APLP2Q06481 763 aa21.13■□□□□ 0.97
LINC01778-206ENST00000635009 SPINK5Q9NQ38 1064 aaPredicted RBP21.08■□□□□ 0.97
LINC01778-206ENST00000635009 CAPN15O75808 1086 aa21.02■□□□□ 0.96
LINC01778-206ENST00000635009 ATXN8OSP0DMR3 200 aa20.91■□□□□ 0.94
LINC01778-206ENST00000635009 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
LINC01778-206ENST00000635009 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
LINC01778-206ENST00000635009 ZNF219Q9P2Y4 722 aaPredicted RBP20.87■□□□□ 0.93
LINC01778-206ENST00000635009 DSG3P32926 999 aa20.66■□□□□ 0.9
LINC01778-206ENST00000635009 ABCB7O75027 752 aa20.61■□□□□ 0.89
LINC01778-206ENST00000635009 POLA2Q14181 598 aa20.5■□□□□ 0.87
LINC01778-206ENST00000635009 ZBTB12Q9Y330 459 aaPredicted RBP20.15■□□□□ 0.82
LINC01778-206ENST00000635009 FBLN2P98095 1184 aa20.02■□□□□ 0.8
LINC01778-206ENST00000635009 MKRN4PQ13434 485 aaPredicted RBP19.96■□□□□ 0.79
LINC01778-206ENST00000635009 OSCARQ8IYS5 282 aa19.83■□□□□ 0.77
LINC01778-206ENST00000635009 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
LINC01778-206ENST00000635009 SPDYE2BA6NHP3 402 aa19.59■□□□□ 0.73
LINC01778-206ENST00000635009 SPDYE6P0CI01 402 aa19.59■□□□□ 0.73
LINC01778-206ENST00000635009 SPDYE2Q495Y8 402 aa19.59■□□□□ 0.73
LINC01778-206ENST00000635009 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
LINC01778-206ENST00000635009 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
LINC01778-206ENST00000635009 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
LINC01778-206ENST00000635009 SSUH2Q9Y2M2 353 aa19.42■□□□□ 0.7
LINC01778-206ENST00000635009 FKBP8Q14318 412 aa19.38■□□□□ 0.69
LINC01778-206ENST00000635009 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.67
LINC01778-206ENST00000635009 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
LINC01778-206ENST00000635009 PROM2Q8N271 834 aa19.09■□□□□ 0.65
LINC01778-206ENST00000635009 SPDYE1Q8NFV5 336 aaPredicted RBP19.05■□□□□ 0.64
LINC01778-206ENST00000635009 PITPNM1O00562 1244 aa19.04■□□□□ 0.64
LINC01778-206ENST00000635009 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
LINC01778-206ENST00000635009 CHRDL2Q6WN34 429 aa18.94■□□□□ 0.62
LINC01778-206ENST00000635009 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
LINC01778-206ENST00000635009 PRR29P0C7W0 189 aa18.79■□□□□ 0.6
LINC01778-206ENST00000635009 FBXO3Q9UK99 471 aa18.7■□□□□ 0.58
LINC01778-206ENST00000635009 FXR2P51116 673 aaKnown RBP eCLIP18.68■□□□□ 0.58
LINC01778-206ENST00000635009 PIP4P2Q8N4L2 257 aa18.67■□□□□ 0.58
LINC01778-206ENST00000635009 PRKAR2AP13861 404 aaKnown RBP18.56■□□□□ 0.56
LINC01778-206ENST00000635009 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
LINC01778-206ENST00000635009 POTEHQ6S545 545 aa18.52■□□□□ 0.56
LINC01778-206ENST00000635009 CREBZFQ9NS37 354 aa18.51■□□□□ 0.55
LINC01778-206ENST00000635009 VASPP50552 380 aaPredicted RBP18.47■□□□□ 0.55
LINC01778-206ENST00000635009 MIER1Q8N108 512 aa18.47■□□□□ 0.55
LINC01778-206ENST00000635009 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
LINC01778-206ENST00000635009 PLEKHG5O94827 1062 aa18.41■□□□□ 0.54
LINC01778-206ENST00000635009 FARP1Q9Y4F1 1045 aaPredicted RBP18.33■□□□□ 0.52
LINC01778-206ENST00000635009 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
LINC01778-206ENST00000635009 MNX1P50219 401 aaPredicted RBP18.28■□□□□ 0.52
LINC01778-206ENST00000635009 ZBTB47Q9UFB7 747 aaPredicted RBP18.24■□□□□ 0.51
LINC01778-206ENST00000635009 NPM1P06748 294 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC01778-206ENST00000635009 IFNLR1Q8IU57 520 aaPredicted RBP18.19■□□□□ 0.5
LINC01778-206ENST00000635009 KLHL34Q8N239 644 aa18.19■□□□□ 0.5
LINC01778-206ENST00000635009 HAX1O00165 279 aa18.11■□□□□ 0.49
LINC01778-206ENST00000635009 C19orf67A6NJJ6 358 aa18.05■□□□□ 0.48
LINC01778-206ENST00000635009 CD44P16070 742 aaKnown RBP18.03■□□□□ 0.48
LINC01778-206ENST00000635009 NUBP1P53384 320 aa18■□□□□ 0.47
LINC01778-206ENST00000635009 SPOCK2Q92563 424 aa18■□□□□ 0.47
LINC01778-206ENST00000635009 RASEFQ8IZ41 740 aa17.98■□□□□ 0.47
LINC01778-206ENST00000635009 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
LINC01778-206ENST00000635009 EVX2Q03828 476 aa17.93■□□□□ 0.46
LINC01778-206ENST00000635009 TSPYL2Q9H2G4 693 aaPredicted RBP17.92■□□□□ 0.46
LINC01778-206ENST00000635009 ZRANB1Q9UGI0 708 aa17.9■□□□□ 0.46
LINC01778-206ENST00000635009 FAM212AQ96EL1 285 aa17.89■□□□□ 0.45
LINC01778-206ENST00000635009 DCAF8Q5TAQ9 597 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms