RNA–Protein interactions for RNA: ENST00000634688.1

SMARCA2-225, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-225ENST00000634688 AEBP2Q6ZN18 517 aaPredicted RBP30.15■■■□□ 2.42
SMARCA2-225ENST00000634688 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
SMARCA2-225ENST00000634688 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
SMARCA2-225ENST00000634688 PHF23Q9BUL5 403 aaPredicted RBP25.39■■□□□ 1.66
SMARCA2-225ENST00000634688 FOXD1Q16676 465 aa24.12■■□□□ 1.45
SMARCA2-225ENST00000634688 POTEDQ86YR6 584 aa23.14■■□□□ 1.29
SMARCA2-225ENST00000634688 MSH5O43196 834 aa22.8■■□□□ 1.24
SMARCA2-225ENST00000634688 PIAS4Q8N2W9 510 aaPredicted RBP22.41■■□□□ 1.18
SMARCA2-225ENST00000634688 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
SMARCA2-225ENST00000634688 PPP6R1Q9UPN7 881 aa22.12■■□□□ 1.13
SMARCA2-225ENST00000634688 ADRA2BP18089 450 aa22.02■■□□□ 1.12
SMARCA2-225ENST00000634688 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
SMARCA2-225ENST00000634688 MAPK8IP2Q13387 824 aaPredicted RBP20.37■□□□□ 0.85
SMARCA2-225ENST00000634688 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
SMARCA2-225ENST00000634688 CACNB1Q02641 598 aaPredicted RBP19.86■□□□□ 0.77
SMARCA2-225ENST00000634688 DCAF8L1A6NGE4 600 aa19.55■□□□□ 0.72
SMARCA2-225ENST00000634688 HOXD11P31277 338 aaPredicted RBP19.43■□□□□ 0.7
SMARCA2-225ENST00000634688 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
SMARCA2-225ENST00000634688 RNF39Q9H2S5 420 aa19.39■□□□□ 0.69
SMARCA2-225ENST00000634688 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
SMARCA2-225ENST00000634688 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
SMARCA2-225ENST00000634688 C1QBPQ07021 282 aaKnown RBP19.08■□□□□ 0.64
SMARCA2-225ENST00000634688 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
SMARCA2-225ENST00000634688 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
SMARCA2-225ENST00000634688 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMARCA2-225ENST00000634688 NPM3O75607 178 aaKnown RBP18.24■□□□□ 0.51
SMARCA2-225ENST00000634688 KCNA4P22459 653 aa18.07■□□□□ 0.48
SMARCA2-225ENST00000634688 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
SMARCA2-225ENST00000634688 POTEHQ6S545 545 aa18.03■□□□□ 0.48
SMARCA2-225ENST00000634688 DSG3P32926 999 aa17.97■□□□□ 0.47
SMARCA2-225ENST00000634688 CAPN15O75808 1086 aa17.94■□□□□ 0.46
SMARCA2-225ENST00000634688 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
SMARCA2-225ENST00000634688 SLC4A2P04920 1241 aa17.55■□□□□ 0.4
SMARCA2-225ENST00000634688 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
SMARCA2-225ENST00000634688 APLP2Q06481 763 aa17.52■□□□□ 0.4
SMARCA2-225ENST00000634688 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
SMARCA2-225ENST00000634688 ABCB7O75027 752 aa17.48■□□□□ 0.39
SMARCA2-225ENST00000634688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.37■□□□□ 0.37
SMARCA2-225ENST00000634688 HNRNPUL2Q1KMD3 747 aaKnown RBP17.37■□□□□ 0.37
SMARCA2-225ENST00000634688 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
SMARCA2-225ENST00000634688 SLC4A1APQ9BWU0 796 aaKnown RBP17.21■□□□□ 0.35
SMARCA2-225ENST00000634688 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
SMARCA2-225ENST00000634688 CHRDL2Q6WN34 429 aa17■□□□□ 0.31
SMARCA2-225ENST00000634688 POLA2Q14181 598 aa16.94■□□□□ 0.3
SMARCA2-225ENST00000634688 MYCNP04198 464 aaPredicted RBP16.9■□□□□ 0.3
SMARCA2-225ENST00000634688 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
SMARCA2-225ENST00000634688 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
SMARCA2-225ENST00000634688 AKT1S1Q96B36 256 aa16.66■□□□□ 0.26
SMARCA2-225ENST00000634688 ZBTB22O15209 634 aa16.63■□□□□ 0.25
SMARCA2-225ENST00000634688 ZBTB12Q9Y330 459 aaPredicted RBP16.58■□□□□ 0.24
SMARCA2-225ENST00000634688 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
SMARCA2-225ENST00000634688 CSRNP3Q8WYN3 585 aa16.56■□□□□ 0.24
SMARCA2-225ENST00000634688 ATF5Q9Y2D1 282 aaPredicted RBP16.53■□□□□ 0.24
SMARCA2-225ENST00000634688 REM2Q8IYK8 340 aaPredicted RBP16.5■□□□□ 0.23
SMARCA2-225ENST00000634688 PIP4P2Q8N4L2 257 aa16.48■□□□□ 0.23
SMARCA2-225ENST00000634688 OSCARQ8IYS5 282 aa16.43■□□□□ 0.22
SMARCA2-225ENST00000634688 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
SMARCA2-225ENST00000634688 HAX1O00165 279 aa16.32■□□□□ 0.2
SMARCA2-225ENST00000634688 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMARCA2-225ENST00000634688 EVX2Q03828 476 aa16.07■□□□□ 0.16
SMARCA2-225ENST00000634688 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
SMARCA2-225ENST00000634688 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
SMARCA2-225ENST00000634688 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
SMARCA2-225ENST00000634688 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
SMARCA2-225ENST00000634688 FBLN2P98095 1184 aa15.93■□□□□ 0.14
SMARCA2-225ENST00000634688 PRKAR2AP13861 404 aaKnown RBP15.9■□□□□ 0.14
SMARCA2-225ENST00000634688 SPDYE1Q8NFV5 336 aaPredicted RBP15.86■□□□□ 0.13
SMARCA2-225ENST00000634688 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
SMARCA2-225ENST00000634688 C19orf67A6NJJ6 358 aa15.8■□□□□ 0.12
SMARCA2-225ENST00000634688 SSUH2Q9Y2M2 353 aa15.75■□□□□ 0.11
SMARCA2-225ENST00000634688 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
SMARCA2-225ENST00000634688 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
SMARCA2-225ENST00000634688 GABBR2O75899 941 aa15.69■□□□□ 0.1
SMARCA2-225ENST00000634688 LHX8Q68G74 356 aa15.61■□□□□ 0.09
SMARCA2-225ENST00000634688 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
SMARCA2-225ENST00000634688 PRR29P0C7W0 189 aa15.51■□□□□ 0.07
SMARCA2-225ENST00000634688 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMARCA2-225ENST00000634688 CD44P16070 742 aaKnown RBP15.37■□□□□ 0.05
SMARCA2-225ENST00000634688 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
SMARCA2-225ENST00000634688 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
SMARCA2-225ENST00000634688 CLCN6P51797 869 aa15.29■□□□□ 0.04
SMARCA2-225ENST00000634688 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
SMARCA2-225ENST00000634688 ZNF579Q8NAF0 562 aaKnown RBP15.12■□□□□ 0.01
SMARCA2-225ENST00000634688 ZRANB1Q9UGI0 708 aa15.07■□□□□ 0
SMARCA2-225ENST00000634688 FKBP8Q14318 412 aa15.03■□□□□ -0
SMARCA2-225ENST00000634688 PLSCR2Q9NRY7 297 aa15.03■□□□□ -0
SMARCA2-225ENST00000634688 CREBZFQ9NS37 354 aa15.01□□□□□ -0.01
SMARCA2-225ENST00000634688 GALR2O43603 387 aaPredicted RBP14.96□□□□□ -0.01
SMARCA2-225ENST00000634688 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
SMARCA2-225ENST00000634688 SPDYE4A6NLX3 237 aa14.9□□□□□ -0.02
SMARCA2-225ENST00000634688 OTUD5Q96G74 571 aa14.89□□□□□ -0.03
SMARCA2-225ENST00000634688 POTEB2H3BUK9 544 aa14.84□□□□□ -0.03
SMARCA2-225ENST00000634688 PAK3O75914 559 aaPredicted RBP14.84□□□□□ -0.03
SMARCA2-225ENST00000634688 PHF12Q96QT6 1004 aa14.81□□□□□ -0.04
SMARCA2-225ENST00000634688 POTEMA6NI47 508 aa14.72□□□□□ -0.05
SMARCA2-225ENST00000634688 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMARCA2-225ENST00000634688 PELP1Q8IZL8 1130 aaKnown RBP14.71□□□□□ -0.05
SMARCA2-225ENST00000634688 MNX1P50219 401 aaPredicted RBP14.68□□□□□ -0.06
SMARCA2-225ENST00000634688 POTEGQ6S5H5 508 aa14.66□□□□□ -0.06
SMARCA2-225ENST00000634688 ASTLQ6HA08 431 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms