RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
PHACTR4-208ENST00000633167 CHIC1Q5VXU3 224 aa22.31■■□□□ 1.16
PHACTR4-208ENST00000633167 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
PHACTR4-208ENST00000633167 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
PHACTR4-208ENST00000633167 FOXD1Q16676 465 aa18.62■□□□□ 0.57
PHACTR4-208ENST00000633167 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
PHACTR4-208ENST00000633167 MSH5O43196 834 aa17.52■□□□□ 0.4
PHACTR4-208ENST00000633167 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
PHACTR4-208ENST00000633167 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
PHACTR4-208ENST00000633167 ADRA2BP18089 450 aa17.32■□□□□ 0.36
PHACTR4-208ENST00000633167 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
PHACTR4-208ENST00000633167 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
PHACTR4-208ENST00000633167 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
PHACTR4-208ENST00000633167 MAPK8IP2Q13387 824 aaPredicted RBP15.88■□□□□ 0.13
PHACTR4-208ENST00000633167 PPP4R3CPQ6ZMV5 832 aa15.61■□□□□ 0.09
PHACTR4-208ENST00000633167 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
PHACTR4-208ENST00000633167 HOXD11P31277 338 aaPredicted RBP15.34■□□□□ 0.05
PHACTR4-208ENST00000633167 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
PHACTR4-208ENST00000633167 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
PHACTR4-208ENST00000633167 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
PHACTR4-208ENST00000633167 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
PHACTR4-208ENST00000633167 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
PHACTR4-208ENST00000633167 DNAJC5BQ9UF47 199 aa14.91□□□□□ -0.02
PHACTR4-208ENST00000633167 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
PHACTR4-208ENST00000633167 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
PHACTR4-208ENST00000633167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.081e-8■■■□□ 15.5
PHACTR4-208ENST00000633167 KCNA4P22459 653 aa14.49□□□□□ -0.09
PHACTR4-208ENST00000633167 U3KPZ7 1027 aaPredicted RBP14.25□□□□□ -0.13
PHACTR4-208ENST00000633167 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
PHACTR4-208ENST00000633167 CAPN15O75808 1086 aa14□□□□□ -0.17
PHACTR4-208ENST00000633167 SPINK5Q9NQ38 1064 aaPredicted RBP14□□□□□ -0.17
PHACTR4-208ENST00000633167 APLP2Q06481 763 aa13.99□□□□□ -0.17
PHACTR4-208ENST00000633167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
PHACTR4-208ENST00000633167 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
PHACTR4-208ENST00000633167 DSG3P32926 999 aa13.94□□□□□ -0.18
PHACTR4-208ENST00000633167 SAMD1Q6SPF0 538 aaPredicted RBP13.86□□□□□ -0.19
PHACTR4-208ENST00000633167 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
PHACTR4-208ENST00000633167 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
PHACTR4-208ENST00000633167 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
PHACTR4-208ENST00000633167 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
PHACTR4-208ENST00000633167 ABCB7O75027 752 aa13.63□□□□□ -0.23
PHACTR4-208ENST00000633167 FOXD4L1Q9NU39 408 aa13.59□□□□□ -0.23
PHACTR4-208ENST00000633167 POLA2Q14181 598 aa13.42□□□□□ -0.26
PHACTR4-208ENST00000633167 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
PHACTR4-208ENST00000633167 POTEHQ6S545 545 aa13.32□□□□□ -0.28
PHACTR4-208ENST00000633167 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
PHACTR4-208ENST00000633167 ZBTB22O15209 634 aa13.3□□□□□ -0.28
PHACTR4-208ENST00000633167 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
PHACTR4-208ENST00000633167 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
PHACTR4-208ENST00000633167 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
PHACTR4-208ENST00000633167 CHRDL2Q6WN34 429 aa13.02□□□□□ -0.33
PHACTR4-208ENST00000633167 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
PHACTR4-208ENST00000633167 FBLN2P98095 1184 aa12.9□□□□□ -0.34
PHACTR4-208ENST00000633167 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
PHACTR4-208ENST00000633167 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
PHACTR4-208ENST00000633167 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
PHACTR4-208ENST00000633167 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
PHACTR4-208ENST00000633167 PITPNM1O00562 1244 aa12.73□□□□□ -0.37
PHACTR4-208ENST00000633167 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
PHACTR4-208ENST00000633167 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
PHACTR4-208ENST00000633167 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
PHACTR4-208ENST00000633167 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
PHACTR4-208ENST00000633167 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
PHACTR4-208ENST00000633167 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
PHACTR4-208ENST00000633167 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
PHACTR4-208ENST00000633167 EHMT2Q96KQ7 1210 aa12.52□□□□□ -0.41
PHACTR4-208ENST00000633167 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
PHACTR4-208ENST00000633167 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
PHACTR4-208ENST00000633167 HAX1O00165 279 aa12.44□□□□□ -0.42
PHACTR4-208ENST00000633167 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
PHACTR4-208ENST00000633167 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
PHACTR4-208ENST00000633167 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
PHACTR4-208ENST00000633167 C19orf67A6NJJ6 358 aa12.24□□□□□ -0.45
PHACTR4-208ENST00000633167 EVX2Q03828 476 aa12.23□□□□□ -0.45
PHACTR4-208ENST00000633167 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
PHACTR4-208ENST00000633167 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
PHACTR4-208ENST00000633167 SPDYE4A6NLX3 237 aa12.17□□□□□ -0.46
PHACTR4-208ENST00000633167 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
PHACTR4-208ENST00000633167 GABBR2O75899 941 aa12.02□□□□□ -0.49
PHACTR4-208ENST00000633167 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
PHACTR4-208ENST00000633167 CLCN6P51797 869 aa12.01□□□□□ -0.49
PHACTR4-208ENST00000633167 CREBZFQ9NS37 354 aa12□□□□□ -0.49
PHACTR4-208ENST00000633167 PROM2Q8N271 834 aa11.94□□□□□ -0.5
PHACTR4-208ENST00000633167 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
PHACTR4-208ENST00000633167 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
PHACTR4-208ENST00000633167 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
PHACTR4-208ENST00000633167 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
PHACTR4-208ENST00000633167 MNX1P50219 401 aaPredicted RBP11.81□□□□□ -0.52
PHACTR4-208ENST00000633167 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
PHACTR4-208ENST00000633167 DCBLD2Q96PD2 775 aa11.73□□□□□ -0.53
PHACTR4-208ENST00000633167 LHX8Q68G74 356 aa11.71□□□□□ -0.53
PHACTR4-208ENST00000633167 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
PHACTR4-208ENST00000633167 GALR2O43603 387 aaPredicted RBP11.65□□□□□ -0.54
PHACTR4-208ENST00000633167 PHF12Q96QT6 1004 aa11.64□□□□□ -0.55
PHACTR4-208ENST00000633167 MIER1Q8N108 512 aa11.59□□□□□ -0.55
PHACTR4-208ENST00000633167 FKBP8Q14318 412 aa11.54□□□□□ -0.56
PHACTR4-208ENST00000633167 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
PHACTR4-208ENST00000633167 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-208ENST00000633167 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
PHACTR4-208ENST00000633167 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms