RNA–Protein interactions for RNA: ENST00000631043.2

TCF4-275, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-275ENST00000631043 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
TCF4-275ENST00000631043 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
TCF4-275ENST00000631043 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
TCF4-275ENST00000631043 PHF23Q9BUL5 403 aaPredicted RBP17.71■□□□□ 0.43
TCF4-275ENST00000631043 FOXD1Q16676 465 aa16.71■□□□□ 0.27
TCF4-275ENST00000631043 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
TCF4-275ENST00000631043 MSH5O43196 834 aa15.83■□□□□ 0.12
TCF4-275ENST00000631043 PIAS4Q8N2W9 510 aaPredicted RBP15.64■□□□□ 0.09
TCF4-275ENST00000631043 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
TCF4-275ENST00000631043 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
TCF4-275ENST00000631043 ADRA2BP18089 450 aa15.44■□□□□ 0.06
TCF4-275ENST00000631043 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
TCF4-275ENST00000631043 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
TCF4-275ENST00000631043 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
TCF4-275ENST00000631043 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
TCF4-275ENST00000631043 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
TCF4-275ENST00000631043 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
TCF4-275ENST00000631043 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
TCF4-275ENST00000631043 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
TCF4-275ENST00000631043 RNF216Q9NWF9 866 aaPredicted RBP13.57□□□□□ -0.24
TCF4-275ENST00000631043 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
TCF4-275ENST00000631043 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
TCF4-275ENST00000631043 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
TCF4-275ENST00000631043 C1QBPQ07021 282 aaKnown RBP13.29□□□□□ -0.28
TCF4-275ENST00000631043 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
TCF4-275ENST00000631043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.32
TCF4-275ENST00000631043 U3KPZ7 1027 aaPredicted RBP12.69□□□□□ -0.38
TCF4-275ENST00000631043 KCNA4P22459 653 aa12.67□□□□□ -0.38
TCF4-275ENST00000631043 CAPN15O75808 1086 aa12.58□□□□□ -0.4
TCF4-275ENST00000631043 APLP2Q06481 763 aa12.56□□□□□ -0.4
TCF4-275ENST00000631043 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
TCF4-275ENST00000631043 DSG3P32926 999 aa12.5□□□□□ -0.41
TCF4-275ENST00000631043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
TCF4-275ENST00000631043 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
TCF4-275ENST00000631043 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
TCF4-275ENST00000631043 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
TCF4-275ENST00000631043 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
TCF4-275ENST00000631043 TRHP20396 242 aaPredicted RBP12.33□□□□□ -0.44
TCF4-275ENST00000631043 ABCB7O75027 752 aa12.21□□□□□ -0.45
TCF4-275ENST00000631043 MYCNP04198 464 aaPredicted RBP12.17□□□□□ -0.46
TCF4-275ENST00000631043 POTEHQ6S545 545 aa12.17□□□□□ -0.46
TCF4-275ENST00000631043 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
TCF4-275ENST00000631043 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
TCF4-275ENST00000631043 POLA2Q14181 598 aa11.98□□□□□ -0.49
TCF4-275ENST00000631043 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
TCF4-275ENST00000631043 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
TCF4-275ENST00000631043 CHRDL2Q6WN34 429 aa11.75□□□□□ -0.53
TCF4-275ENST00000631043 ATF5Q9Y2D1 282 aaPredicted RBP11.73□□□□□ -0.53
TCF4-275ENST00000631043 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
TCF4-275ENST00000631043 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
TCF4-275ENST00000631043 ZBTB22O15209 634 aa11.57□□□□□ -0.56
TCF4-275ENST00000631043 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
TCF4-275ENST00000631043 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
TCF4-275ENST00000631043 FBLN2P98095 1184 aa11.49□□□□□ -0.57
TCF4-275ENST00000631043 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
TCF4-275ENST00000631043 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
TCF4-275ENST00000631043 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
TCF4-275ENST00000631043 PIP4P2Q8N4L2 257 aa11.41□□□□□ -0.58
TCF4-275ENST00000631043 PITPNM1O00562 1244 aa11.39□□□□□ -0.59
TCF4-275ENST00000631043 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
TCF4-275ENST00000631043 FXR2P51116 673 aaKnown RBP eCLIP11.36□□□□□ -0.59
TCF4-275ENST00000631043 HAX1O00165 279 aa11.29□□□□□ -0.6
TCF4-275ENST00000631043 SPDYE1Q8NFV5 336 aaPredicted RBP11.27□□□□□ -0.61
TCF4-275ENST00000631043 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
TCF4-275ENST00000631043 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
TCF4-275ENST00000631043 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
TCF4-275ENST00000631043 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
TCF4-275ENST00000631043 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
TCF4-275ENST00000631043 PABPN1Q86U42 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
TCF4-275ENST00000631043 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
TCF4-275ENST00000631043 CSRNP3Q8WYN3 585 aa11□□□□□ -0.65
TCF4-275ENST00000631043 C19orf67A6NJJ6 358 aa10.99□□□□□ -0.65
TCF4-275ENST00000631043 EVX2Q03828 476 aa10.99□□□□□ -0.65
TCF4-275ENST00000631043 CHADLQ6NUI6 762 aa10.91□□□□□ -0.66
TCF4-275ENST00000631043 GABBR2O75899 941 aa10.84□□□□□ -0.67
TCF4-275ENST00000631043 CLCN6P51797 869 aa10.84□□□□□ -0.67
TCF4-275ENST00000631043 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
TCF4-275ENST00000631043 FARP1Q9Y4F1 1045 aaPredicted RBP10.82□□□□□ -0.68
TCF4-275ENST00000631043 EHMT2Q96KQ7 1210 aa10.79□□□□□ -0.68
TCF4-275ENST00000631043 CD44P16070 742 aaKnown RBP10.78□□□□□ -0.68
TCF4-275ENST00000631043 SPDYE4A6NLX3 237 aa10.72□□□□□ -0.69
TCF4-275ENST00000631043 LHX8Q68G74 356 aa10.66□□□□□ -0.7
TCF4-275ENST00000631043 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
TCF4-275ENST00000631043 ZNF579Q8NAF0 562 aaKnown RBP10.63□□□□□ -0.71
TCF4-275ENST00000631043 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
TCF4-275ENST00000631043 DCBLD2Q96PD2 775 aa10.61□□□□□ -0.71
TCF4-275ENST00000631043 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
TCF4-275ENST00000631043 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
TCF4-275ENST00000631043 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
TCF4-275ENST00000631043 GALR2O43603 387 aaPredicted RBP10.43□□□□□ -0.74
TCF4-275ENST00000631043 MNX1P50219 401 aaPredicted RBP10.42□□□□□ -0.74
TCF4-275ENST00000631043 PROM2Q8N271 834 aa10.42□□□□□ -0.74
TCF4-275ENST00000631043 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
TCF4-275ENST00000631043 PHF12Q96QT6 1004 aa10.39□□□□□ -0.75
TCF4-275ENST00000631043 ASTLQ6HA08 431 aaPredicted RBP10.27□□□□□ -0.77
TCF4-275ENST00000631043 MIER1Q8N108 512 aa10.27□□□□□ -0.77
TCF4-275ENST00000631043 MS4A3Q96HJ5 214 aa10.27□□□□□ -0.77
TCF4-275ENST00000631043 TSPYL2Q9H2G4 693 aaPredicted RBP10.27□□□□□ -0.77
TCF4-275ENST00000631043 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
TCF4-275ENST00000631043 C7P10643 843 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms