RNA–Protein interactions for RNA: ENST00000630828.2

TCF4-274, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-274ENST00000630828 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
TCF4-274ENST00000630828 CHIC1Q5VXU3 224 aa17.95■□□□□ 0.46
TCF4-274ENST00000630828 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
TCF4-274ENST00000630828 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
TCF4-274ENST00000630828 FOXD1Q16676 465 aa15.49■□□□□ 0.07
TCF4-274ENST00000630828 POTEDQ86YR6 584 aa15.01□□□□□ -0.01
TCF4-274ENST00000630828 MSH5O43196 834 aa14.56□□□□□ -0.08
TCF4-274ENST00000630828 PIAS4Q8N2W9 510 aaPredicted RBP14.25□□□□□ -0.13
TCF4-274ENST00000630828 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
TCF4-274ENST00000630828 PLPPR3Q6T4P5 718 aa14.07□□□□□ -0.16
TCF4-274ENST00000630828 ADRA2BP18089 450 aa14.06□□□□□ -0.16
TCF4-274ENST00000630828 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
TCF4-274ENST00000630828 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
TCF4-274ENST00000630828 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
TCF4-274ENST00000630828 CACNB1Q02641 598 aaPredicted RBP12.71□□□□□ -0.37
TCF4-274ENST00000630828 RNF39Q9H2S5 420 aa12.47□□□□□ -0.41
TCF4-274ENST00000630828 HOXD11P31277 338 aaPredicted RBP12.44□□□□□ -0.42
TCF4-274ENST00000630828 DCAF8L1A6NGE4 600 aa12.35□□□□□ -0.43
TCF4-274ENST00000630828 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
TCF4-274ENST00000630828 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
TCF4-274ENST00000630828 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
TCF4-274ENST00000630828 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
TCF4-274ENST00000630828 DNAJC5BQ9UF47 199 aa12.11□□□□□ -0.47
TCF4-274ENST00000630828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCF4-274ENST00000630828 POTEHQ6S545 545 aa11.63□□□□□ -0.55
TCF4-274ENST00000630828 NCBP3Q53F19 620 aaKnown RBP11.61□□□□□ -0.55
TCF4-274ENST00000630828 NPM3O75607 178 aaKnown RBP11.56□□□□□ -0.56
TCF4-274ENST00000630828 U3KPZ7 1027 aaPredicted RBP11.53□□□□□ -0.56
TCF4-274ENST00000630828 DSG3P32926 999 aa11.52□□□□□ -0.57
TCF4-274ENST00000630828 SPINK5Q9NQ38 1064 aaPredicted RBP11.47□□□□□ -0.57
TCF4-274ENST00000630828 CAPN15O75808 1086 aa11.36□□□□□ -0.59
TCF4-274ENST00000630828 KCNA4P22459 653 aa11.25□□□□□ -0.61
TCF4-274ENST00000630828 SLC4A2P04920 1241 aa11.21□□□□□ -0.61
TCF4-274ENST00000630828 ABCB7O75027 752 aa11.09□□□□□ -0.63
TCF4-274ENST00000630828 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
TCF4-274ENST00000630828 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
TCF4-274ENST00000630828 APLP2Q06481 763 aa10.98□□□□□ -0.65
TCF4-274ENST00000630828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
TCF4-274ENST00000630828 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
TCF4-274ENST00000630828 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
TCF4-274ENST00000630828 SAMD1Q6SPF0 538 aaPredicted RBP10.87□□□□□ -0.67
TCF4-274ENST00000630828 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
TCF4-274ENST00000630828 SLC4A1APQ9BWU0 796 aaKnown RBP10.76□□□□□ -0.69
TCF4-274ENST00000630828 POLA2Q14181 598 aa10.74□□□□□ -0.69
TCF4-274ENST00000630828 SP7Q8TDD2 431 aaPredicted RBP10.7□□□□□ -0.7
TCF4-274ENST00000630828 MYCNP04198 464 aaPredicted RBP10.64□□□□□ -0.71
TCF4-274ENST00000630828 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
TCF4-274ENST00000630828 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
TCF4-274ENST00000630828 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
TCF4-274ENST00000630828 EHMT2Q96KQ7 1210 aa10.54□□□□□ -0.72
TCF4-274ENST00000630828 ATF5Q9Y2D1 282 aaPredicted RBP10.54□□□□□ -0.72
TCF4-274ENST00000630828 FXR2P51116 673 aaKnown RBP eCLIP10.46□□□□□ -0.73
TCF4-274ENST00000630828 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
TCF4-274ENST00000630828 ZBTB12Q9Y330 459 aaPredicted RBP10.43□□□□□ -0.74
TCF4-274ENST00000630828 PITPNM1O00562 1244 aa10.42□□□□□ -0.74
TCF4-274ENST00000630828 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
TCF4-274ENST00000630828 EVX2Q03828 476 aa10.39□□□□□ -0.75
TCF4-274ENST00000630828 HAX1O00165 279 aa10.38□□□□□ -0.75
TCF4-274ENST00000630828 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
TCF4-274ENST00000630828 ZBTB22O15209 634 aa10.33□□□□□ -0.76
TCF4-274ENST00000630828 SPDYE2BA6NHP3 402 aa10.14□□□□□ -0.79
TCF4-274ENST00000630828 C19orf67A6NJJ6 358 aa10.14□□□□□ -0.79
TCF4-274ENST00000630828 SPDYE6P0CI01 402 aa10.14□□□□□ -0.79
TCF4-274ENST00000630828 SPDYE2Q495Y8 402 aa10.14□□□□□ -0.79
TCF4-274ENST00000630828 PRKAR2AP13861 404 aaKnown RBP10.1□□□□□ -0.79
TCF4-274ENST00000630828 GABBR2O75899 941 aa10.07□□□□□ -0.8
TCF4-274ENST00000630828 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
TCF4-274ENST00000630828 MKRN4PQ13434 485 aaPredicted RBP10.04□□□□□ -0.8
TCF4-274ENST00000630828 LHX8Q68G74 356 aa10.02□□□□□ -0.81
TCF4-274ENST00000630828 SPDYE1Q8NFV5 336 aaPredicted RBP10.02□□□□□ -0.81
TCF4-274ENST00000630828 SSUH2Q9Y2M2 353 aa10.02□□□□□ -0.81
TCF4-274ENST00000630828 FBLN2P98095 1184 aa9.97□□□□□ -0.81
TCF4-274ENST00000630828 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
TCF4-274ENST00000630828 POTEIP0CG38 1075 aa9.93□□□□□ -0.82
TCF4-274ENST00000630828 CHADLQ6NUI6 762 aa9.91□□□□□ -0.82
TCF4-274ENST00000630828 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
TCF4-274ENST00000630828 PRR29P0C7W0 189 aa9.78□□□□□ -0.84
TCF4-274ENST00000630828 PABPN1Q86U42 306 aaKnown RBP eCLIP9.77□□□□□ -0.85
TCF4-274ENST00000630828 CD44P16070 742 aaKnown RBP9.74□□□□□ -0.85
TCF4-274ENST00000630828 FARP1Q9Y4F1 1045 aaPredicted RBP9.74□□□□□ -0.85
TCF4-274ENST00000630828 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
TCF4-274ENST00000630828 CLCN6P51797 869 aa9.71□□□□□ -0.86
TCF4-274ENST00000630828 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
TCF4-274ENST00000630828 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
TCF4-274ENST00000630828 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
TCF4-274ENST00000630828 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
TCF4-274ENST00000630828 DCBLD2Q96PD2 775 aa9.58□□□□□ -0.88
TCF4-274ENST00000630828 CREBZFQ9NS37 354 aa9.56□□□□□ -0.88
TCF4-274ENST00000630828 GALR2O43603 387 aaPredicted RBP9.54□□□□□ -0.88
TCF4-274ENST00000630828 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
TCF4-274ENST00000630828 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.9
TCF4-274ENST00000630828 POTEMA6NI47 508 aa9.44□□□□□ -0.9
TCF4-274ENST00000630828 POTEJP0CG39 1038 aa9.41□□□□□ -0.9
TCF4-274ENST00000630828 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
TCF4-274ENST00000630828 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
TCF4-274ENST00000630828 POTEGQ6S5H5 508 aa9.4□□□□□ -0.9
TCF4-274ENST00000630828 FKBP8Q14318 412 aa9.39□□□□□ -0.91
TCF4-274ENST00000630828 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
TCF4-274ENST00000630828 LCE2DQ5TA82 110 aaPredicted RBP9.35□□□□□ -0.91
TCF4-274ENST00000630828 ASTLQ6HA08 431 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms