RNA–Protein interactions for RNA: ENST00000629960.2

LINC01828-211, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 345 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-211ENST00000629960 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
LINC01828-211ENST00000629960 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
LINC01828-211ENST00000629960 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
LINC01828-211ENST00000629960 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
LINC01828-211ENST00000629960 FOXD1Q16676 465 aa22.28■■□□□ 1.16
LINC01828-211ENST00000629960 PLPPR3Q6T4P5 718 aa21.76■■□□□ 1.07
LINC01828-211ENST00000629960 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
LINC01828-211ENST00000629960 ADRA2BP18089 450 aa21.11■□□□□ 0.97
LINC01828-211ENST00000629960 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
LINC01828-211ENST00000629960 MSH5O43196 834 aa20.57■□□□□ 0.88
LINC01828-211ENST00000629960 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
LINC01828-211ENST00000629960 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
LINC01828-211ENST00000629960 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
LINC01828-211ENST00000629960 SCAF1Q9H7N4 1312 aaKnown RBP19.16■□□□□ 0.66
LINC01828-211ENST00000629960 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
LINC01828-211ENST00000629960 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
LINC01828-211ENST00000629960 HOXD11P31277 338 aaPredicted RBP18.49■□□□□ 0.55
LINC01828-211ENST00000629960 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
LINC01828-211ENST00000629960 RNF216Q9NWF9 866 aaPredicted RBP18.42■□□□□ 0.54
LINC01828-211ENST00000629960 KCNA4P22459 653 aa18.34■□□□□ 0.53
LINC01828-211ENST00000629960 NPM3O75607 178 aaKnown RBP18.31■□□□□ 0.52
LINC01828-211ENST00000629960 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
LINC01828-211ENST00000629960 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
LINC01828-211ENST00000629960 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
LINC01828-211ENST00000629960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC01828-211ENST00000629960 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
LINC01828-211ENST00000629960 CACNB1Q02641 598 aaPredicted RBP17.43■□□□□ 0.38
LINC01828-211ENST00000629960 C1QBPQ07021 282 aaKnown RBP17.37■□□□□ 0.37
LINC01828-211ENST00000629960 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.36
LINC01828-211ENST00000629960 U3KPZ7 1027 aaPredicted RBP17.31■□□□□ 0.36
LINC01828-211ENST00000629960 SPINK5Q9NQ38 1064 aaPredicted RBP16.96■□□□□ 0.31
LINC01828-211ENST00000629960 ZBTB22O15209 634 aa16.93■□□□□ 0.3
LINC01828-211ENST00000629960 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
LINC01828-211ENST00000629960 MYCNP04198 464 aaPredicted RBP16.86■□□□□ 0.29
LINC01828-211ENST00000629960 CAPN15O75808 1086 aa16.81■□□□□ 0.28
LINC01828-211ENST00000629960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
LINC01828-211ENST00000629960 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
LINC01828-211ENST00000629960 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
LINC01828-211ENST00000629960 DSG3P32926 999 aa16.69■□□□□ 0.26
LINC01828-211ENST00000629960 APLP2Q06481 763 aa16.67■□□□□ 0.26
LINC01828-211ENST00000629960 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
LINC01828-211ENST00000629960 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
LINC01828-211ENST00000629960 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
LINC01828-211ENST00000629960 ABCB7O75027 752 aa16.51■□□□□ 0.23
LINC01828-211ENST00000629960 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
LINC01828-211ENST00000629960 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
LINC01828-211ENST00000629960 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
LINC01828-211ENST00000629960 POLA2Q14181 598 aa16.33■□□□□ 0.2
LINC01828-211ENST00000629960 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
LINC01828-211ENST00000629960 MKRN4PQ13434 485 aaPredicted RBP15.82■□□□□ 0.12
LINC01828-211ENST00000629960 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
LINC01828-211ENST00000629960 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
LINC01828-211ENST00000629960 FBLN2P98095 1184 aa15.71■□□□□ 0.11
LINC01828-211ENST00000629960 AKT1S1Q96B36 256 aa15.57■□□□□ 0.08
LINC01828-211ENST00000629960 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
LINC01828-211ENST00000629960 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
LINC01828-211ENST00000629960 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
LINC01828-211ENST00000629960 REM2Q8IYK8 340 aaPredicted RBP15.47■□□□□ 0.07
LINC01828-211ENST00000629960 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
LINC01828-211ENST00000629960 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
LINC01828-211ENST00000629960 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
LINC01828-211ENST00000629960 POTEHQ6S545 545 aa15.32■□□□□ 0.04
LINC01828-211ENST00000629960 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
LINC01828-211ENST00000629960 PABPN1Q86U42 306 aaKnown RBP eCLIP15.22■□□□□ 0.03
LINC01828-211ENST00000629960 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
LINC01828-211ENST00000629960 SPDYE1Q8NFV5 336 aaPredicted RBP15.13■□□□□ 0.01
LINC01828-211ENST00000629960 PIP4P2Q8N4L2 257 aa15.12■□□□□ 0.01
LINC01828-211ENST00000629960 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
LINC01828-211ENST00000629960 FXR2P51116 673 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC01828-211ENST00000629960 PROM2Q8N271 834 aa14.93□□□□□ -0.02
LINC01828-211ENST00000629960 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
LINC01828-211ENST00000629960 PRKAR2AP13861 404 aaKnown RBP14.89□□□□□ -0.03
LINC01828-211ENST00000629960 FKBP8Q14318 412 aa14.85□□□□□ -0.03
LINC01828-211ENST00000629960 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
LINC01828-211ENST00000629960 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
LINC01828-211ENST00000629960 CREBZFQ9NS37 354 aa14.71□□□□□ -0.05
LINC01828-211ENST00000629960 HAX1O00165 279 aa14.69□□□□□ -0.06
LINC01828-211ENST00000629960 EVX2Q03828 476 aa14.68□□□□□ -0.06
LINC01828-211ENST00000629960 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
LINC01828-211ENST00000629960 C19orf67A6NJJ6 358 aa14.59□□□□□ -0.07
LINC01828-211ENST00000629960 MNX1P50219 401 aaPredicted RBP14.55□□□□□ -0.08
LINC01828-211ENST00000629960 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
LINC01828-211ENST00000629960 CD44P16070 742 aaKnown RBP14.42□□□□□ -0.1
LINC01828-211ENST00000629960 MIER1Q8N108 512 aa14.42□□□□□ -0.1
LINC01828-211ENST00000629960 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC01828-211ENST00000629960 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
LINC01828-211ENST00000629960 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
LINC01828-211ENST00000629960 GABBR2O75899 941 aa14.28□□□□□ -0.12
LINC01828-211ENST00000629960 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
LINC01828-211ENST00000629960 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
LINC01828-211ENST00000629960 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
LINC01828-211ENST00000629960 ZNF579Q8NAF0 562 aaKnown RBP14.23□□□□□ -0.13
LINC01828-211ENST00000629960 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
LINC01828-211ENST00000629960 PHF12Q96QT6 1004 aa14.17□□□□□ -0.14
LINC01828-211ENST00000629960 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
LINC01828-211ENST00000629960 NUBP1P53384 320 aa14.16□□□□□ -0.14
LINC01828-211ENST00000629960 PAK3O75914 559 aaPredicted RBP14.15□□□□□ -0.14
LINC01828-211ENST00000629960 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
LINC01828-211ENST00000629960 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
LINC01828-211ENST00000629960 GALR2O43603 387 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms