RNA–Protein interactions for RNA: ENST00000628692.2

LINC01828-210, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 1,404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-210ENST00000628692 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
LINC01828-210ENST00000628692 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
LINC01828-210ENST00000628692 SENP3Q9H4L4 574 aaPredicted RBP19.4■□□□□ 0.7
LINC01828-210ENST00000628692 PHF23Q9BUL5 403 aaPredicted RBP19.08■□□□□ 0.64
LINC01828-210ENST00000628692 FOXD1Q16676 465 aa18.2■□□□□ 0.5
LINC01828-210ENST00000628692 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
LINC01828-210ENST00000628692 PLPPR3Q6T4P5 718 aa17.9■□□□□ 0.46
LINC01828-210ENST00000628692 MSH5O43196 834 aa17.28■□□□□ 0.36
LINC01828-210ENST00000628692 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
LINC01828-210ENST00000628692 ADRA2BP18089 450 aa16.67■□□□□ 0.26
LINC01828-210ENST00000628692 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
LINC01828-210ENST00000628692 KCNA4P22459 653 aa16.11■□□□□ 0.17
LINC01828-210ENST00000628692 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
LINC01828-210ENST00000628692 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
LINC01828-210ENST00000628692 NCBP3Q53F19 620 aaKnown RBP15.69■□□□□ 0.1
LINC01828-210ENST00000628692 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
LINC01828-210ENST00000628692 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
LINC01828-210ENST00000628692 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
LINC01828-210ENST00000628692 DMRT2Q9Y5R5 561 aa15.28■□□□□ 0.04
LINC01828-210ENST00000628692 CACNB1Q02641 598 aaPredicted RBP15.27■□□□□ 0.04
LINC01828-210ENST00000628692 MAPK8IP2Q13387 824 aaPredicted RBP15.26■□□□□ 0.03
LINC01828-210ENST00000628692 CNKSR2Q8WXI2 1034 aa15.26■□□□□ 0.03
LINC01828-210ENST00000628692 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
LINC01828-210ENST00000628692 RNF216Q9NWF9 866 aaPredicted RBP14.8□□□□□ -0.04
LINC01828-210ENST00000628692 ZBTB22O15209 634 aa14.75□□□□□ -0.05
LINC01828-210ENST00000628692 DNAJC5BQ9UF47 199 aa14.72□□□□□ -0.05
LINC01828-210ENST00000628692 RNF39Q9H2S5 420 aa14.69□□□□□ -0.06
LINC01828-210ENST00000628692 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
LINC01828-210ENST00000628692 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
LINC01828-210ENST00000628692 HOXD11P31277 338 aaPredicted RBP14.52□□□□□ -0.08
LINC01828-210ENST00000628692 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
LINC01828-210ENST00000628692 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
LINC01828-210ENST00000628692 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
LINC01828-210ENST00000628692 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
LINC01828-210ENST00000628692 POTEHQ6S545 545 aa14.04□□□□□ -0.16
LINC01828-210ENST00000628692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC01828-210ENST00000628692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
LINC01828-210ENST00000628692 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
LINC01828-210ENST00000628692 FKBP8Q14318 412 aa13.82□□□□□ -0.2
LINC01828-210ENST00000628692 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
LINC01828-210ENST00000628692 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
LINC01828-210ENST00000628692 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
LINC01828-210ENST00000628692 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
LINC01828-210ENST00000628692 APLP2Q06481 763 aa13.63□□□□□ -0.23
LINC01828-210ENST00000628692 RTN4Q9NQC3 1192 aaKnown RBP13.59□□□□□ -0.23
LINC01828-210ENST00000628692 DSG3P32926 999 aa13.52□□□□□ -0.25
LINC01828-210ENST00000628692 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
LINC01828-210ENST00000628692 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
LINC01828-210ENST00000628692 CAPN15O75808 1086 aa13.4□□□□□ -0.26
LINC01828-210ENST00000628692 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
LINC01828-210ENST00000628692 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
LINC01828-210ENST00000628692 FBLN2P98095 1184 aa13.25□□□□□ -0.29
LINC01828-210ENST00000628692 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
LINC01828-210ENST00000628692 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
LINC01828-210ENST00000628692 POLA2Q14181 598 aa13.14□□□□□ -0.31
LINC01828-210ENST00000628692 MKRN4PQ13434 485 aaPredicted RBP13.11□□□□□ -0.31
LINC01828-210ENST00000628692 ABCB7O75027 752 aa13.03□□□□□ -0.32
LINC01828-210ENST00000628692 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
LINC01828-210ENST00000628692 PROM2Q8N271 834 aa12.96□□□□□ -0.34
LINC01828-210ENST00000628692 VASPP50552 380 aaPredicted RBP12.94□□□□□ -0.34
LINC01828-210ENST00000628692 CHRDL2Q6WN34 429 aa12.91□□□□□ -0.34
LINC01828-210ENST00000628692 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
LINC01828-210ENST00000628692 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
LINC01828-210ENST00000628692 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
LINC01828-210ENST00000628692 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
LINC01828-210ENST00000628692 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
LINC01828-210ENST00000628692 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
LINC01828-210ENST00000628692 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
LINC01828-210ENST00000628692 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
LINC01828-210ENST00000628692 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
LINC01828-210ENST00000628692 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
LINC01828-210ENST00000628692 OSCARQ8IYS5 282 aa12.62□□□□□ -0.39
LINC01828-210ENST00000628692 PLCD3Q8N3E9 789 aa12.61□□□□□ -0.39
LINC01828-210ENST00000628692 SPOCK2Q92563 424 aa12.61□□□□□ -0.39
LINC01828-210ENST00000628692 PLCB2Q00722 1185 aa12.6□□□□□ -0.39
LINC01828-210ENST00000628692 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC01828-210ENST00000628692 PKD2Q13563 968 aa12.56□□□□□ -0.4
LINC01828-210ENST00000628692 MIER1Q8N108 512 aa12.55□□□□□ -0.4
LINC01828-210ENST00000628692 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
LINC01828-210ENST00000628692 PLEKHG5O94827 1062 aa12.54□□□□□ -0.4
LINC01828-210ENST00000628692 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
LINC01828-210ENST00000628692 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
LINC01828-210ENST00000628692 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.41
LINC01828-210ENST00000628692 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
LINC01828-210ENST00000628692 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
LINC01828-210ENST00000628692 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
LINC01828-210ENST00000628692 HAX1O00165 279 aa12.42□□□□□ -0.42
LINC01828-210ENST00000628692 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
LINC01828-210ENST00000628692 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
LINC01828-210ENST00000628692 CIZ1Q9ULV3 898 aaPredicted RBP12.36□□□□□ -0.43
LINC01828-210ENST00000628692 VSIG10Q8N0Z9 540 aa12.28□□□□□ -0.44
LINC01828-210ENST00000628692 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01828-210ENST00000628692 PAXIP1Q6ZW49 1069 aaPredicted RBP12.27□□□□□ -0.45
LINC01828-210ENST00000628692 RGL2O15211 777 aa12.26□□□□□ -0.45
LINC01828-210ENST00000628692 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
LINC01828-210ENST00000628692 EVX2Q03828 476 aa12.25□□□□□ -0.45
LINC01828-210ENST00000628692 TRIM41Q8WV44 630 aa12.24□□□□□ -0.45
LINC01828-210ENST00000628692 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
LINC01828-210ENST00000628692 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC01828-210ENST00000628692 BCANQ96GW7 911 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms