RNA–Protein interactions for RNA: ENST00000628061.1

AC004039.1-204, humanhuman

TSL 5

Gene AC004039.1, Length 776 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004039.1-204ENST00000628061 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
AC004039.1-204ENST00000628061 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.45
AC004039.1-204ENST00000628061 SENP3Q9H4L4 574 aaPredicted RBP21.92■■□□□ 1.1
AC004039.1-204ENST00000628061 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
AC004039.1-204ENST00000628061 FOXD1Q16676 465 aa20.48■□□□□ 0.87
AC004039.1-204ENST00000628061 MSH5O43196 834 aa19.23■□□□□ 0.67
AC004039.1-204ENST00000628061 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
AC004039.1-204ENST00000628061 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
AC004039.1-204ENST00000628061 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
AC004039.1-204ENST00000628061 PPP6R1Q9UPN7 881 aa18.98■□□□□ 0.63
AC004039.1-204ENST00000628061 ADRA2BP18089 450 aa18.9■□□□□ 0.62
AC004039.1-204ENST00000628061 MAPK8IP2Q13387 824 aaPredicted RBP17.44■□□□□ 0.38
AC004039.1-204ENST00000628061 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
AC004039.1-204ENST00000628061 SCAF1Q9H7N4 1312 aaKnown RBP17.26■□□□□ 0.35
AC004039.1-204ENST00000628061 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
AC004039.1-204ENST00000628061 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
AC004039.1-204ENST00000628061 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
AC004039.1-204ENST00000628061 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
AC004039.1-204ENST00000628061 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
AC004039.1-204ENST00000628061 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
AC004039.1-204ENST00000628061 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
AC004039.1-204ENST00000628061 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
AC004039.1-204ENST00000628061 DNAJC5BQ9UF47 199 aa16.08■□□□□ 0.16
AC004039.1-204ENST00000628061 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
AC004039.1-204ENST00000628061 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
AC004039.1-204ENST00000628061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.84■□□□□ 0.13
AC004039.1-204ENST00000628061 U3KPZ7 1027 aaPredicted RBP15.48■□□□□ 0.07
AC004039.1-204ENST00000628061 SPINK5Q9NQ38 1064 aaPredicted RBP15.34■□□□□ 0.05
AC004039.1-204ENST00000628061 KCNA4P22459 653 aa15.33■□□□□ 0.04
AC004039.1-204ENST00000628061 CAPN15O75808 1086 aa15.32■□□□□ 0.04
AC004039.1-204ENST00000628061 DSG3P32926 999 aa15.28■□□□□ 0.04
AC004039.1-204ENST00000628061 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
AC004039.1-204ENST00000628061 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
AC004039.1-204ENST00000628061 APLP2Q06481 763 aa14.99□□□□□ -0.01
AC004039.1-204ENST00000628061 POTEHQ6S545 545 aa14.99□□□□□ -0.01
AC004039.1-204ENST00000628061 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
AC004039.1-204ENST00000628061 ABCB7O75027 752 aa14.95□□□□□ -0.02
AC004039.1-204ENST00000628061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.93□□□□□ -0.02
AC004039.1-204ENST00000628061 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
AC004039.1-204ENST00000628061 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
AC004039.1-204ENST00000628061 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
AC004039.1-204ENST00000628061 POLA2Q14181 598 aa14.57□□□□□ -0.08
AC004039.1-204ENST00000628061 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
AC004039.1-204ENST00000628061 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
AC004039.1-204ENST00000628061 FOXD4L1Q9NU39 408 aa14.37□□□□□ -0.11
AC004039.1-204ENST00000628061 CHRDL2Q6WN34 429 aa14.36□□□□□ -0.11
AC004039.1-204ENST00000628061 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
AC004039.1-204ENST00000628061 ZBTB12Q9Y330 459 aaPredicted RBP14.21□□□□□ -0.13
AC004039.1-204ENST00000628061 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
AC004039.1-204ENST00000628061 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
AC004039.1-204ENST00000628061 ZBTB22O15209 634 aa14.09□□□□□ -0.15
AC004039.1-204ENST00000628061 REM2Q8IYK8 340 aaPredicted RBP14.07□□□□□ -0.16
AC004039.1-204ENST00000628061 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
AC004039.1-204ENST00000628061 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
AC004039.1-204ENST00000628061 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
AC004039.1-204ENST00000628061 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
AC004039.1-204ENST00000628061 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004039.1-204ENST00000628061 HAX1O00165 279 aa13.79□□□□□ -0.2
AC004039.1-204ENST00000628061 FBLN2P98095 1184 aa13.78□□□□□ -0.2
AC004039.1-204ENST00000628061 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
AC004039.1-204ENST00000628061 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
AC004039.1-204ENST00000628061 SPDYE2Q495Y8 402 aa13.77□□□□□ -0.21
AC004039.1-204ENST00000628061 MKRN4PQ13434 485 aaPredicted RBP13.67□□□□□ -0.22
AC004039.1-204ENST00000628061 EVX2Q03828 476 aa13.61□□□□□ -0.23
AC004039.1-204ENST00000628061 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
AC004039.1-204ENST00000628061 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
AC004039.1-204ENST00000628061 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
AC004039.1-204ENST00000628061 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
AC004039.1-204ENST00000628061 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
AC004039.1-204ENST00000628061 C19orf67A6NJJ6 358 aa13.41□□□□□ -0.26
AC004039.1-204ENST00000628061 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
AC004039.1-204ENST00000628061 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC004039.1-204ENST00000628061 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
AC004039.1-204ENST00000628061 GABBR2O75899 941 aa13.28□□□□□ -0.28
AC004039.1-204ENST00000628061 CSRNP3Q8WYN3 585 aa13.23□□□□□ -0.29
AC004039.1-204ENST00000628061 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
AC004039.1-204ENST00000628061 CD44P16070 742 aaKnown RBP13.11□□□□□ -0.31
AC004039.1-204ENST00000628061 LHX8Q68G74 356 aa13.08□□□□□ -0.32
AC004039.1-204ENST00000628061 POTEIP0CG38 1075 aa13□□□□□ -0.33
AC004039.1-204ENST00000628061 CLCN6P51797 869 aa12.96□□□□□ -0.33
AC004039.1-204ENST00000628061 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
AC004039.1-204ENST00000628061 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
AC004039.1-204ENST00000628061 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
AC004039.1-204ENST00000628061 ZRANB1Q9UGI0 708 aa12.9□□□□□ -0.34
AC004039.1-204ENST00000628061 SPDYE4A6NLX3 237 aa12.89□□□□□ -0.35
AC004039.1-204ENST00000628061 ZNF579Q8NAF0 562 aaKnown RBP12.89□□□□□ -0.35
AC004039.1-204ENST00000628061 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
AC004039.1-204ENST00000628061 GALR2O43603 387 aaPredicted RBP12.77□□□□□ -0.37
AC004039.1-204ENST00000628061 PAK3O75914 559 aaPredicted RBP12.72□□□□□ -0.37
AC004039.1-204ENST00000628061 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
AC004039.1-204ENST00000628061 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
AC004039.1-204ENST00000628061 NPM1P06748 294 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC004039.1-204ENST00000628061 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
AC004039.1-204ENST00000628061 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
AC004039.1-204ENST00000628061 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
AC004039.1-204ENST00000628061 PROM2Q8N271 834 aa12.54□□□□□ -0.4
AC004039.1-204ENST00000628061 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
AC004039.1-204ENST00000628061 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
AC004039.1-204ENST00000628061 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
AC004039.1-204ENST00000628061 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms