RNA–Protein interactions for RNA: ENST00000627552.1

CGA-205, Transcript of glycoprotein hormones, alpha polypeptide, humanhuman

TSL 2

Gene CGA, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGA-205ENST00000627552 AEBP2Q6ZN18 517 aaPredicted RBP37.52■■■■□ 3.6
CGA-205ENST00000627552 CHIC1Q5VXU3 224 aa35.75■■■■□ 3.31
CGA-205ENST00000627552 SENP3Q9H4L4 574 aaPredicted RBP31.92■■■□□ 2.7
CGA-205ENST00000627552 PHF23Q9BUL5 403 aaPredicted RBP31.53■■■□□ 2.64
CGA-205ENST00000627552 FOXD1Q16676 465 aa29.76■■■□□ 2.35
CGA-205ENST00000627552 PLPPR3Q6T4P5 718 aa28.62■■■□□ 2.17
CGA-205ENST00000627552 PPP6R1Q9UPN7 881 aa27.96■■■□□ 2.07
CGA-205ENST00000627552 ADRA2BP18089 450 aa27.87■■■□□ 2.05
CGA-205ENST00000627552 PIAS4Q8N2W9 510 aaPredicted RBP27.85■■■□□ 2.05
CGA-205ENST00000627552 MSH5O43196 834 aa27.75■■■□□ 2.03
CGA-205ENST00000627552 POTEDQ86YR6 584 aa26.84■■□□□ 1.89
CGA-205ENST00000627552 MAPK8IP2Q13387 824 aaPredicted RBP25.55■■□□□ 1.68
CGA-205ENST00000627552 SCAF1Q9H7N4 1312 aaKnown RBP25.43■■□□□ 1.66
CGA-205ENST00000627552 DMRT2Q9Y5R5 561 aa25.36■■□□□ 1.65
CGA-205ENST00000627552 PPP4R3CPQ6ZMV5 832 aa25.12■■□□□ 1.61
CGA-205ENST00000627552 CNKSR2Q8WXI2 1034 aa24.59■■□□□ 1.53
CGA-205ENST00000627552 HOXD11P31277 338 aaPredicted RBP24.49■■□□□ 1.51
CGA-205ENST00000627552 RNF216Q9NWF9 866 aaPredicted RBP24.34■■□□□ 1.49
CGA-205ENST00000627552 DCAF8L1A6NGE4 600 aa24.28■■□□□ 1.48
CGA-205ENST00000627552 NCBP3Q53F19 620 aaKnown RBP24.16■■□□□ 1.46
CGA-205ENST00000627552 NPM3O75607 178 aaKnown RBP23.88■■□□□ 1.41
CGA-205ENST00000627552 RNF39Q9H2S5 420 aa23.73■■□□□ 1.39
CGA-205ENST00000627552 CACNB1Q02641 598 aaPredicted RBP23.71■■□□□ 1.39
CGA-205ENST00000627552 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
CGA-205ENST00000627552 KCNA4P22459 653 aa23.57■■□□□ 1.36
CGA-205ENST00000627552 C1QBPQ07021 282 aaKnown RBP23.35■■□□□ 1.33
CGA-205ENST00000627552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.3■■□□□ 1.32
CGA-205ENST00000627552 U3KPZ7 1027 aaPredicted RBP22.88■■□□□ 1.25
CGA-205ENST00000627552 SLC4A2P04920 1241 aa22.77■■□□□ 1.24
CGA-205ENST00000627552 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
CGA-205ENST00000627552 CAPN15O75808 1086 aa22.42■■□□□ 1.18
CGA-205ENST00000627552 DSG3P32926 999 aa22.27■■□□□ 1.16
CGA-205ENST00000627552 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
CGA-205ENST00000627552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.22■■□□□ 1.15
CGA-205ENST00000627552 HNRNPUL2Q1KMD3 747 aaKnown RBP22.22■■□□□ 1.15
CGA-205ENST00000627552 APLP2Q06481 763 aa22.18■■□□□ 1.14
CGA-205ENST00000627552 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
CGA-205ENST00000627552 TRHP20396 242 aaPredicted RBP22.1■■□□□ 1.13
CGA-205ENST00000627552 MYCNP04198 464 aaPredicted RBP22.06■■□□□ 1.12
CGA-205ENST00000627552 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
CGA-205ENST00000627552 ABCB7O75027 752 aa21.95■■□□□ 1.1
CGA-205ENST00000627552 FOXD4L1Q9NU39 408 aa21.93■■□□□ 1.1
CGA-205ENST00000627552 ZBTB22O15209 634 aa21.72■■□□□ 1.07
CGA-205ENST00000627552 ATF5Q9Y2D1 282 aaPredicted RBP21.58■■□□□ 1.05
CGA-205ENST00000627552 POLA2Q14181 598 aa21.54■■□□□ 1.04
CGA-205ENST00000627552 ATXN8OSP0DMR3 200 aa21.21■□□□□ 0.99
CGA-205ENST00000627552 RBM42Q9BTD8 480 aaKnown RBP21.2■□□□□ 0.98
CGA-205ENST00000627552 ZBTB12Q9Y330 459 aaPredicted RBP21.11■□□□□ 0.97
CGA-205ENST00000627552 POTEHQ6S545 545 aa21.06■□□□□ 0.96
CGA-205ENST00000627552 OSCARQ8IYS5 282 aa20.9■□□□□ 0.94
CGA-205ENST00000627552 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
CGA-205ENST00000627552 AKT1S1Q96B36 256 aa20.76■□□□□ 0.91
CGA-205ENST00000627552 CHRDL2Q6WN34 429 aa20.71■□□□□ 0.91
CGA-205ENST00000627552 FBLN2P98095 1184 aa20.65■□□□□ 0.9
CGA-205ENST00000627552 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
CGA-205ENST00000627552 MKRN4PQ13434 485 aaPredicted RBP20.6■□□□□ 0.89
CGA-205ENST00000627552 REM2Q8IYK8 340 aaPredicted RBP20.59■□□□□ 0.89
CGA-205ENST00000627552 SPDYE2BA6NHP3 402 aa20.48■□□□□ 0.87
CGA-205ENST00000627552 SPDYE6P0CI01 402 aa20.48■□□□□ 0.87
CGA-205ENST00000627552 SPDYE2Q495Y8 402 aa20.48■□□□□ 0.87
CGA-205ENST00000627552 PITPNM1O00562 1244 aa20.39■□□□□ 0.85
CGA-205ENST00000627552 PIP4P2Q8N4L2 257 aa20.27■□□□□ 0.84
CGA-205ENST00000627552 SSUH2Q9Y2M2 353 aa20.26■□□□□ 0.83
CGA-205ENST00000627552 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
CGA-205ENST00000627552 FXR2P51116 673 aaKnown RBP eCLIP20.16■□□□□ 0.82
CGA-205ENST00000627552 SPDYE1Q8NFV5 336 aaPredicted RBP20.07■□□□□ 0.8
CGA-205ENST00000627552 CLEC11AQ9Y240 323 aa20.04■□□□□ 0.8
CGA-205ENST00000627552 PABPN1Q86U42 306 aaKnown RBP eCLIP19.98■□□□□ 0.79
CGA-205ENST00000627552 PRKAR2AP13861 404 aaKnown RBP19.84■□□□□ 0.77
CGA-205ENST00000627552 SP7Q8TDD2 431 aaPredicted RBP19.82■□□□□ 0.76
CGA-205ENST00000627552 HAX1O00165 279 aa19.81■□□□□ 0.76
CGA-205ENST00000627552 PRR29P0C7W0 189 aa19.72■□□□□ 0.75
CGA-205ENST00000627552 CHADLQ6NUI6 762 aa19.68■□□□□ 0.74
CGA-205ENST00000627552 SPDYE4A6NLX3 237 aa19.67■□□□□ 0.74
CGA-205ENST00000627552 EVX2Q03828 476 aa19.63■□□□□ 0.73
CGA-205ENST00000627552 C19orf67A6NJJ6 358 aa19.51■□□□□ 0.71
CGA-205ENST00000627552 STAG3Q9UJ98 1225 aa19.42■□□□□ 0.7
CGA-205ENST00000627552 FARP1Q9Y4F1 1045 aaPredicted RBP19.38■□□□□ 0.69
CGA-205ENST00000627552 CREBZFQ9NS37 354 aa19.32■□□□□ 0.68
CGA-205ENST00000627552 PROM2Q8N271 834 aa19.26■□□□□ 0.67
CGA-205ENST00000627552 CD44P16070 742 aaKnown RBP19.23■□□□□ 0.67
CGA-205ENST00000627552 GABBR2O75899 941 aa19.17■□□□□ 0.66
CGA-205ENST00000627552 MNX1P50219 401 aaPredicted RBP19.02■□□□□ 0.64
CGA-205ENST00000627552 ZRANB1Q9UGI0 708 aa18.97■□□□□ 0.63
CGA-205ENST00000627552 ZNF579Q8NAF0 562 aaKnown RBP18.95■□□□□ 0.62
CGA-205ENST00000627552 NPM1P06748 294 aaKnown RBP eCLIP18.91■□□□□ 0.62
CGA-205ENST00000627552 FKBP8Q14318 412 aa18.87■□□□□ 0.61
CGA-205ENST00000627552 CLCN6P51797 869 aa18.86■□□□□ 0.61
CGA-205ENST00000627552 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
CGA-205ENST00000627552 POTEIP0CG38 1075 aa18.8■□□□□ 0.6
CGA-205ENST00000627552 PHF12Q96QT6 1004 aa18.75■□□□□ 0.59
CGA-205ENST00000627552 GALR2O43603 387 aaPredicted RBP18.71■□□□□ 0.59
CGA-205ENST00000627552 MIER1Q8N108 512 aa18.71■□□□□ 0.59
CGA-205ENST00000627552 DCBLD2Q96PD2 775 aa18.66■□□□□ 0.58
CGA-205ENST00000627552 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
CGA-205ENST00000627552 TSPYL2Q9H2G4 693 aaPredicted RBP18.61■□□□□ 0.57
CGA-205ENST00000627552 PLCD3Q8N3E9 789 aa18.6■□□□□ 0.57
CGA-205ENST00000627552 LHX8Q68G74 356 aa18.57■□□□□ 0.56
CGA-205ENST00000627552 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
CGA-205ENST00000627552 RASEFQ8IZ41 740 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms