RNA–Protein interactions for RNA: ENST00000627303.1

LINC01241-202, Transcript of long intergenic non-protein coding RNA 1241, humanhuman

TSL 4

Gene LINC01241, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01241-202ENST00000627303 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
LINC01241-202ENST00000627303 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
LINC01241-202ENST00000627303 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
LINC01241-202ENST00000627303 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
LINC01241-202ENST00000627303 FOXD1Q16676 465 aa20.47■□□□□ 0.87
LINC01241-202ENST00000627303 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
LINC01241-202ENST00000627303 MSH5O43196 834 aa19.33■□□□□ 0.68
LINC01241-202ENST00000627303 PIAS4Q8N2W9 510 aaPredicted RBP19.04■□□□□ 0.64
LINC01241-202ENST00000627303 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
LINC01241-202ENST00000627303 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
LINC01241-202ENST00000627303 ADRA2BP18089 450 aa18.72■□□□□ 0.59
LINC01241-202ENST00000627303 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
LINC01241-202ENST00000627303 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
LINC01241-202ENST00000627303 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
LINC01241-202ENST00000627303 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
LINC01241-202ENST00000627303 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
LINC01241-202ENST00000627303 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
LINC01241-202ENST00000627303 HOXD11P31277 338 aaPredicted RBP16.49■□□□□ 0.23
LINC01241-202ENST00000627303 RNF39Q9H2S5 420 aa16.44■□□□□ 0.22
LINC01241-202ENST00000627303 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
LINC01241-202ENST00000627303 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
LINC01241-202ENST00000627303 C1QBPQ07021 282 aaKnown RBP16.18■□□□□ 0.18
LINC01241-202ENST00000627303 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
LINC01241-202ENST00000627303 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
LINC01241-202ENST00000627303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC01241-202ENST00000627303 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
LINC01241-202ENST00000627303 U3KPZ7 1027 aaPredicted RBP15.34■□□□□ 0.05
LINC01241-202ENST00000627303 CAPN15O75808 1086 aa15.27■□□□□ 0.04
LINC01241-202ENST00000627303 POTEHQ6S545 545 aa15.27■□□□□ 0.04
LINC01241-202ENST00000627303 DSG3P32926 999 aa15.26■□□□□ 0.03
LINC01241-202ENST00000627303 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
LINC01241-202ENST00000627303 SLC4A2P04920 1241 aa14.93□□□□□ -0.02
LINC01241-202ENST00000627303 TRHP20396 242 aaPredicted RBP14.92□□□□□ -0.02
LINC01241-202ENST00000627303 ABCB7O75027 752 aa14.88□□□□□ -0.03
LINC01241-202ENST00000627303 APLP2Q06481 763 aa14.88□□□□□ -0.03
LINC01241-202ENST00000627303 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
LINC01241-202ENST00000627303 KCNA4P22459 653 aa14.85□□□□□ -0.03
LINC01241-202ENST00000627303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
LINC01241-202ENST00000627303 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
LINC01241-202ENST00000627303 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
LINC01241-202ENST00000627303 RBM42Q9BTD8 480 aaKnown RBP14.58□□□□□ -0.08
LINC01241-202ENST00000627303 CHRDL2Q6WN34 429 aa14.43□□□□□ -0.1
LINC01241-202ENST00000627303 POLA2Q14181 598 aa14.41□□□□□ -0.1
LINC01241-202ENST00000627303 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
LINC01241-202ENST00000627303 AKT1S1Q96B36 256 aa14.14□□□□□ -0.15
LINC01241-202ENST00000627303 SP7Q8TDD2 431 aaPredicted RBP14.11□□□□□ -0.15
LINC01241-202ENST00000627303 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
LINC01241-202ENST00000627303 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
LINC01241-202ENST00000627303 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
LINC01241-202ENST00000627303 PIP4P2Q8N4L2 257 aa13.99□□□□□ -0.17
LINC01241-202ENST00000627303 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
LINC01241-202ENST00000627303 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
LINC01241-202ENST00000627303 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
LINC01241-202ENST00000627303 PITPNM1O00562 1244 aa13.88□□□□□ -0.19
LINC01241-202ENST00000627303 HAX1O00165 279 aa13.87□□□□□ -0.19
LINC01241-202ENST00000627303 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC01241-202ENST00000627303 EVX2Q03828 476 aa13.64□□□□□ -0.23
LINC01241-202ENST00000627303 ZBTB22O15209 634 aa13.63□□□□□ -0.23
LINC01241-202ENST00000627303 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
LINC01241-202ENST00000627303 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
LINC01241-202ENST00000627303 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
LINC01241-202ENST00000627303 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
LINC01241-202ENST00000627303 FBLN2P98095 1184 aa13.56□□□□□ -0.24
LINC01241-202ENST00000627303 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
LINC01241-202ENST00000627303 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
LINC01241-202ENST00000627303 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
LINC01241-202ENST00000627303 C19orf67A6NJJ6 358 aa13.4□□□□□ -0.26
LINC01241-202ENST00000627303 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
LINC01241-202ENST00000627303 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
LINC01241-202ENST00000627303 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
LINC01241-202ENST00000627303 GABBR2O75899 941 aa13.32□□□□□ -0.28
LINC01241-202ENST00000627303 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
LINC01241-202ENST00000627303 LHX8Q68G74 356 aa13.23□□□□□ -0.29
LINC01241-202ENST00000627303 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
LINC01241-202ENST00000627303 PABPN1Q86U42 306 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC01241-202ENST00000627303 CD44P16070 742 aaKnown RBP13.06□□□□□ -0.32
LINC01241-202ENST00000627303 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
LINC01241-202ENST00000627303 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
LINC01241-202ENST00000627303 CLCN6P51797 869 aa12.95□□□□□ -0.34
LINC01241-202ENST00000627303 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
LINC01241-202ENST00000627303 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
LINC01241-202ENST00000627303 ZRANB1Q9UGI0 708 aa12.82□□□□□ -0.36
LINC01241-202ENST00000627303 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
LINC01241-202ENST00000627303 CREBZFQ9NS37 354 aa12.76□□□□□ -0.37
LINC01241-202ENST00000627303 GALR2O43603 387 aaPredicted RBP12.72□□□□□ -0.37
LINC01241-202ENST00000627303 STAG3Q9UJ98 1225 aa12.72□□□□□ -0.37
LINC01241-202ENST00000627303 PAK3O75914 559 aaPredicted RBP12.63□□□□□ -0.39
LINC01241-202ENST00000627303 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
LINC01241-202ENST00000627303 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
LINC01241-202ENST00000627303 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
LINC01241-202ENST00000627303 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
LINC01241-202ENST00000627303 SPDYE4A6NLX3 237 aa12.56□□□□□ -0.4
LINC01241-202ENST00000627303 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01241-202ENST00000627303 PELP1Q8IZL8 1130 aaKnown RBP12.5□□□□□ -0.41
LINC01241-202ENST00000627303 POTEMA6NI47 508 aa12.49□□□□□ -0.41
LINC01241-202ENST00000627303 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
LINC01241-202ENST00000627303 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
LINC01241-202ENST00000627303 MS4A3Q96HJ5 214 aa12.42□□□□□ -0.42
LINC01241-202ENST00000627303 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
LINC01241-202ENST00000627303 ASTLQ6HA08 431 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms