RNA–Protein interactions for RNA: ENST00000627142.2

AC004039.1-202, humanhuman

TSL 5

Gene AC004039.1, Length 549 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004039.1-202ENST00000627142 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
AC004039.1-202ENST00000627142 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
AC004039.1-202ENST00000627142 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.77
AC004039.1-202ENST00000627142 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
AC004039.1-202ENST00000627142 FOXD1Q16676 465 aa18.55■□□□□ 0.56
AC004039.1-202ENST00000627142 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
AC004039.1-202ENST00000627142 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.36
AC004039.1-202ENST00000627142 MSH5O43196 834 aa17.31■□□□□ 0.36
AC004039.1-202ENST00000627142 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
AC004039.1-202ENST00000627142 ADRA2BP18089 450 aa17.23■□□□□ 0.35
AC004039.1-202ENST00000627142 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
AC004039.1-202ENST00000627142 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
AC004039.1-202ENST00000627142 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
AC004039.1-202ENST00000627142 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
AC004039.1-202ENST00000627142 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
AC004039.1-202ENST00000627142 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
AC004039.1-202ENST00000627142 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
AC004039.1-202ENST00000627142 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
AC004039.1-202ENST00000627142 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
AC004039.1-202ENST00000627142 CACNB1Q02641 598 aaPredicted RBP14.87□□□□□ -0.03
AC004039.1-202ENST00000627142 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
AC004039.1-202ENST00000627142 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
AC004039.1-202ENST00000627142 DNAJC5BQ9UF47 199 aa14.67□□□□□ -0.06
AC004039.1-202ENST00000627142 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
AC004039.1-202ENST00000627142 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
AC004039.1-202ENST00000627142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
AC004039.1-202ENST00000627142 KCNA4P22459 653 aa14.26□□□□□ -0.13
AC004039.1-202ENST00000627142 U3KPZ7 1027 aaPredicted RBP14.13□□□□□ -0.15
AC004039.1-202ENST00000627142 SLC4A2P04920 1241 aa14□□□□□ -0.17
AC004039.1-202ENST00000627142 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
AC004039.1-202ENST00000627142 DSG3P32926 999 aa13.86□□□□□ -0.19
AC004039.1-202ENST00000627142 SLC24A1O60721 1099 aa13.85□□□□□ -0.19
AC004039.1-202ENST00000627142 CAPN15O75808 1086 aa13.83□□□□□ -0.2
AC004039.1-202ENST00000627142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
AC004039.1-202ENST00000627142 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
AC004039.1-202ENST00000627142 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
AC004039.1-202ENST00000627142 APLP2Q06481 763 aa13.6□□□□□ -0.23
AC004039.1-202ENST00000627142 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
AC004039.1-202ENST00000627142 SAMD1Q6SPF0 538 aaPredicted RBP13.55□□□□□ -0.24
AC004039.1-202ENST00000627142 ABCB7O75027 752 aa13.53□□□□□ -0.24
AC004039.1-202ENST00000627142 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
AC004039.1-202ENST00000627142 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
AC004039.1-202ENST00000627142 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
AC004039.1-202ENST00000627142 POTEHQ6S545 545 aa13.33□□□□□ -0.28
AC004039.1-202ENST00000627142 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
AC004039.1-202ENST00000627142 POLA2Q14181 598 aa13.26□□□□□ -0.29
AC004039.1-202ENST00000627142 ATF5Q9Y2D1 282 aaPredicted RBP13.23□□□□□ -0.29
AC004039.1-202ENST00000627142 ZBTB22O15209 634 aa13.16□□□□□ -0.3
AC004039.1-202ENST00000627142 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
AC004039.1-202ENST00000627142 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
AC004039.1-202ENST00000627142 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
AC004039.1-202ENST00000627142 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
AC004039.1-202ENST00000627142 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
AC004039.1-202ENST00000627142 OSCARQ8IYS5 282 aa12.84□□□□□ -0.35
AC004039.1-202ENST00000627142 AMER1Q5JTC6 1135 aaPredicted RBP12.78□□□□□ -0.36
AC004039.1-202ENST00000627142 REM2Q8IYK8 340 aaPredicted RBP12.77□□□□□ -0.37
AC004039.1-202ENST00000627142 CSRNP3Q8WYN3 585 aa12.75□□□□□ -0.37
AC004039.1-202ENST00000627142 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
AC004039.1-202ENST00000627142 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
AC004039.1-202ENST00000627142 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
AC004039.1-202ENST00000627142 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
AC004039.1-202ENST00000627142 FBLN2P98095 1184 aa12.59□□□□□ -0.39
AC004039.1-202ENST00000627142 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
AC004039.1-202ENST00000627142 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
AC004039.1-202ENST00000627142 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC004039.1-202ENST00000627142 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
AC004039.1-202ENST00000627142 SP7Q8TDD2 431 aaPredicted RBP12.46□□□□□ -0.41
AC004039.1-202ENST00000627142 SSUH2Q9Y2M2 353 aa12.46□□□□□ -0.41
AC004039.1-202ENST00000627142 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
AC004039.1-202ENST00000627142 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
AC004039.1-202ENST00000627142 HAX1O00165 279 aa12.35□□□□□ -0.43
AC004039.1-202ENST00000627142 EVX2Q03828 476 aa12.31□□□□□ -0.44
AC004039.1-202ENST00000627142 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
AC004039.1-202ENST00000627142 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
AC004039.1-202ENST00000627142 PRKAR2AP13861 404 aaKnown RBP12.27□□□□□ -0.45
AC004039.1-202ENST00000627142 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
AC004039.1-202ENST00000627142 C19orf67A6NJJ6 358 aa12.16□□□□□ -0.46
AC004039.1-202ENST00000627142 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
AC004039.1-202ENST00000627142 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
AC004039.1-202ENST00000627142 GABBR2O75899 941 aa11.97□□□□□ -0.49
AC004039.1-202ENST00000627142 FARP1Q9Y4F1 1045 aaPredicted RBP11.96□□□□□ -0.49
AC004039.1-202ENST00000627142 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
AC004039.1-202ENST00000627142 CD44P16070 742 aaKnown RBP11.87□□□□□ -0.51
AC004039.1-202ENST00000627142 ARXQ96QS3 562 aa11.87□□□□□ -0.51
AC004039.1-202ENST00000627142 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
AC004039.1-202ENST00000627142 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
AC004039.1-202ENST00000627142 STAG3Q9UJ98 1225 aa11.84□□□□□ -0.51
AC004039.1-202ENST00000627142 BCANQ96GW7 911 aa11.8□□□□□ -0.52
AC004039.1-202ENST00000627142 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
AC004039.1-202ENST00000627142 TAOK2Q9UL54 1235 aa11.77□□□□□ -0.53
AC004039.1-202ENST00000627142 CLCN6P51797 869 aa11.73□□□□□ -0.53
AC004039.1-202ENST00000627142 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
AC004039.1-202ENST00000627142 PROM2Q8N271 834 aa11.71□□□□□ -0.53
AC004039.1-202ENST00000627142 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
AC004039.1-202ENST00000627142 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
AC004039.1-202ENST00000627142 LHX8Q68G74 356 aa11.68□□□□□ -0.54
AC004039.1-202ENST00000627142 PLCB2Q00722 1185 aa11.67□□□□□ -0.54
AC004039.1-202ENST00000627142 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
AC004039.1-202ENST00000627142 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
AC004039.1-202ENST00000627142 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms