RNA–Protein interactions for RNA: ENST00000626946.1

LGI1-207, Transcript of leucine rich glioma inactivated 1, humanhuman

TSL 4

Gene LGI1, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1-207ENST00000626946 AEBP2Q6ZN18 517 aaPredicted RBP32.57■■■□□ 2.8
LGI1-207ENST00000626946 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
LGI1-207ENST00000626946 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
LGI1-207ENST00000626946 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
LGI1-207ENST00000626946 FOXD1Q16676 465 aa25.96■■□□□ 1.75
LGI1-207ENST00000626946 PLPPR3Q6T4P5 718 aa25.38■■□□□ 1.65
LGI1-207ENST00000626946 PPP6R1Q9UPN7 881 aa24.43■■□□□ 1.5
LGI1-207ENST00000626946 ADRA2BP18089 450 aa24.39■■□□□ 1.49
LGI1-207ENST00000626946 MSH5O43196 834 aa24.33■■□□□ 1.49
LGI1-207ENST00000626946 POTEDQ86YR6 584 aa24.32■■□□□ 1.48
LGI1-207ENST00000626946 PIAS4Q8N2W9 510 aaPredicted RBP24.18■■□□□ 1.46
LGI1-207ENST00000626946 SCAF1Q9H7N4 1312 aaKnown RBP22.35■■□□□ 1.17
LGI1-207ENST00000626946 PPP4R3CPQ6ZMV5 832 aa22.33■■□□□ 1.17
LGI1-207ENST00000626946 MAPK8IP2Q13387 824 aaPredicted RBP22.21■■□□□ 1.15
LGI1-207ENST00000626946 DMRT2Q9Y5R5 561 aa21.97■■□□□ 1.11
LGI1-207ENST00000626946 CNKSR2Q8WXI2 1034 aa21.78■■□□□ 1.08
LGI1-207ENST00000626946 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
LGI1-207ENST00000626946 KCNA4P22459 653 aa21.47■■□□□ 1.03
LGI1-207ENST00000626946 RNF216Q9NWF9 866 aaPredicted RBP21.42■■□□□ 1.02
LGI1-207ENST00000626946 HOXD11P31277 338 aaPredicted RBP21.41■■□□□ 1.02
LGI1-207ENST00000626946 NPM3O75607 178 aaKnown RBP21.33■■□□□ 1.01
LGI1-207ENST00000626946 DCAF8L1A6NGE4 600 aa21.18■□□□□ 0.98
LGI1-207ENST00000626946 CACNB1Q02641 598 aaPredicted RBP21.13■□□□□ 0.97
LGI1-207ENST00000626946 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
LGI1-207ENST00000626946 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
LGI1-207ENST00000626946 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
LGI1-207ENST00000626946 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
LGI1-207ENST00000626946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.39■□□□□ 0.85
LGI1-207ENST00000626946 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
LGI1-207ENST00000626946 U3KPZ7 1027 aaPredicted RBP20.02■□□□□ 0.8
LGI1-207ENST00000626946 FOXD4L1Q9NU39 408 aa19.85■□□□□ 0.77
LGI1-207ENST00000626946 ZBTB22O15209 634 aa19.73■□□□□ 0.75
LGI1-207ENST00000626946 MYCNP04198 464 aaPredicted RBP19.73■□□□□ 0.75
LGI1-207ENST00000626946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.7■□□□□ 0.74
LGI1-207ENST00000626946 HNRNPUL2Q1KMD3 747 aaKnown RBP19.7■□□□□ 0.74
LGI1-207ENST00000626946 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
LGI1-207ENST00000626946 APLP2Q06481 763 aa19.57■□□□□ 0.72
LGI1-207ENST00000626946 SPINK5Q9NQ38 1064 aaPredicted RBP19.54■□□□□ 0.72
LGI1-207ENST00000626946 CAPN15O75808 1086 aa19.49■□□□□ 0.71
LGI1-207ENST00000626946 EHMT2Q96KQ7 1210 aa19.46■□□□□ 0.71
LGI1-207ENST00000626946 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
LGI1-207ENST00000626946 DSG3P32926 999 aa19.37■□□□□ 0.69
LGI1-207ENST00000626946 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
LGI1-207ENST00000626946 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
LGI1-207ENST00000626946 ATXN8OSP0DMR3 200 aa19.21■□□□□ 0.67
LGI1-207ENST00000626946 ATF5Q9Y2D1 282 aaPredicted RBP19.2■□□□□ 0.66
LGI1-207ENST00000626946 ABCB7O75027 752 aa19.08■□□□□ 0.64
LGI1-207ENST00000626946 POTEHQ6S545 545 aa18.99■□□□□ 0.63
LGI1-207ENST00000626946 POLA2Q14181 598 aa18.95■□□□□ 0.62
LGI1-207ENST00000626946 ZBTB12Q9Y330 459 aaPredicted RBP18.63■□□□□ 0.57
LGI1-207ENST00000626946 FBLN2P98095 1184 aa18.45■□□□□ 0.54
LGI1-207ENST00000626946 RBM42Q9BTD8 480 aaKnown RBP18.43■□□□□ 0.54
LGI1-207ENST00000626946 MKRN4PQ13434 485 aaPredicted RBP18.36■□□□□ 0.53
LGI1-207ENST00000626946 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
LGI1-207ENST00000626946 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
LGI1-207ENST00000626946 SPDYE2BA6NHP3 402 aa18.11■□□□□ 0.49
LGI1-207ENST00000626946 SPDYE6P0CI01 402 aa18.11■□□□□ 0.49
LGI1-207ENST00000626946 SPDYE2Q495Y8 402 aa18.11■□□□□ 0.49
LGI1-207ENST00000626946 AKT1S1Q96B36 256 aa18.07■□□□□ 0.48
LGI1-207ENST00000626946 ZNF692Q9BU19 519 aaPredicted RBP17.99■□□□□ 0.47
LGI1-207ENST00000626946 SSUH2Q9Y2M2 353 aa17.92■□□□□ 0.46
LGI1-207ENST00000626946 REM2Q8IYK8 340 aaPredicted RBP17.88■□□□□ 0.45
LGI1-207ENST00000626946 SPDYE4A6NLX3 237 aa17.82■□□□□ 0.44
LGI1-207ENST00000626946 PABPN1Q86U42 306 aaKnown RBP eCLIP17.74■□□□□ 0.43
LGI1-207ENST00000626946 PIP4P2Q8N4L2 257 aa17.72■□□□□ 0.43
LGI1-207ENST00000626946 PITPNM1O00562 1244 aa17.66■□□□□ 0.42
LGI1-207ENST00000626946 SP7Q8TDD2 431 aaPredicted RBP17.66■□□□□ 0.42
LGI1-207ENST00000626946 SPDYE1Q8NFV5 336 aaPredicted RBP17.65■□□□□ 0.42
LGI1-207ENST00000626946 FKBP8Q14318 412 aa17.56■□□□□ 0.4
LGI1-207ENST00000626946 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
LGI1-207ENST00000626946 FXR2P51116 673 aaKnown RBP eCLIP17.53■□□□□ 0.4
LGI1-207ENST00000626946 HAX1O00165 279 aa17.5■□□□□ 0.39
LGI1-207ENST00000626946 PROM2Q8N271 834 aa17.49■□□□□ 0.39
LGI1-207ENST00000626946 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
LGI1-207ENST00000626946 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
LGI1-207ENST00000626946 EVX2Q03828 476 aa17.29■□□□□ 0.36
LGI1-207ENST00000626946 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
LGI1-207ENST00000626946 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
LGI1-207ENST00000626946 CREBZFQ9NS37 354 aa17.08■□□□□ 0.32
LGI1-207ENST00000626946 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
LGI1-207ENST00000626946 C19orf67A6NJJ6 358 aa16.98■□□□□ 0.31
LGI1-207ENST00000626946 FARP1Q9Y4F1 1045 aaPredicted RBP16.98■□□□□ 0.31
LGI1-207ENST00000626946 MIER1Q8N108 512 aa16.94■□□□□ 0.3
LGI1-207ENST00000626946 PLEKHG5O94827 1062 aa16.89■□□□□ 0.29
LGI1-207ENST00000626946 PLCD3Q8N3E9 789 aa16.88■□□□□ 0.29
LGI1-207ENST00000626946 MNX1P50219 401 aaPredicted RBP16.87■□□□□ 0.29
LGI1-207ENST00000626946 GABBR2O75899 941 aa16.84■□□□□ 0.29
LGI1-207ENST00000626946 NPM1P06748 294 aaKnown RBP eCLIP16.82■□□□□ 0.28
LGI1-207ENST00000626946 VASPP50552 380 aaPredicted RBP16.79■□□□□ 0.28
LGI1-207ENST00000626946 ZBTB47Q9UFB7 747 aaPredicted RBP16.72■□□□□ 0.27
LGI1-207ENST00000626946 CD44P16070 742 aaKnown RBP16.71■□□□□ 0.27
LGI1-207ENST00000626946 PAK3O75914 559 aaPredicted RBP16.59■□□□□ 0.25
LGI1-207ENST00000626946 KLHL34Q8N239 644 aa16.58■□□□□ 0.24
LGI1-207ENST00000626946 ZRANB1Q9UGI0 708 aa16.58■□□□□ 0.24
LGI1-207ENST00000626946 LHX8Q68G74 356 aa16.57■□□□□ 0.24
LGI1-207ENST00000626946 IFNLR1Q8IU57 520 aaPredicted RBP16.54■□□□□ 0.24
LGI1-207ENST00000626946 NUBP1P53384 320 aa16.53■□□□□ 0.24
LGI1-207ENST00000626946 RASEFQ8IZ41 740 aa16.51■□□□□ 0.23
LGI1-207ENST00000626946 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
LGI1-207ENST00000626946 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms