RNA–Protein interactions for RNA: ENST00000625237.1

LINC01440-207, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 622 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-207ENST00000625237 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
LINC01440-207ENST00000625237 CHIC1Q5VXU3 224 aa24.7■■□□□ 1.54
LINC01440-207ENST00000625237 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
LINC01440-207ENST00000625237 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
LINC01440-207ENST00000625237 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
LINC01440-207ENST00000625237 FOXD1Q16676 465 aa19.35■□□□□ 0.69
LINC01440-207ENST00000625237 ADRA2BP18089 450 aa19■□□□□ 0.63
LINC01440-207ENST00000625237 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
LINC01440-207ENST00000625237 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
LINC01440-207ENST00000625237 KCNA4P22459 653 aa18.07■□□□□ 0.48
LINC01440-207ENST00000625237 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
LINC01440-207ENST00000625237 MSH5O43196 834 aa17.73■□□□□ 0.43
LINC01440-207ENST00000625237 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
LINC01440-207ENST00000625237 SCAF1Q9H7N4 1312 aaKnown RBP17.53■□□□□ 0.4
LINC01440-207ENST00000625237 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
LINC01440-207ENST00000625237 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
LINC01440-207ENST00000625237 NPM3O75607 178 aaKnown RBP17.35■□□□□ 0.37
LINC01440-207ENST00000625237 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
LINC01440-207ENST00000625237 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
LINC01440-207ENST00000625237 CSRNP3Q8WYN3 585 aa16.97■□□□□ 0.31
LINC01440-207ENST00000625237 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
LINC01440-207ENST00000625237 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
LINC01440-207ENST00000625237 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
LINC01440-207ENST00000625237 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
LINC01440-207ENST00000625237 ZBTB22O15209 634 aa16.59■□□□□ 0.25
LINC01440-207ENST00000625237 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
LINC01440-207ENST00000625237 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
LINC01440-207ENST00000625237 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
LINC01440-207ENST00000625237 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
LINC01440-207ENST00000625237 ATXN8OSP0DMR3 200 aa15.96■□□□□ 0.15
LINC01440-207ENST00000625237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.9■□□□□ 0.14
LINC01440-207ENST00000625237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
LINC01440-207ENST00000625237 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
LINC01440-207ENST00000625237 SAMD1Q6SPF0 538 aaPredicted RBP15.69■□□□□ 0.1
LINC01440-207ENST00000625237 U3KPZ7 1027 aaPredicted RBP15.66■□□□□ 0.1
LINC01440-207ENST00000625237 APLP2Q06481 763 aa15.51■□□□□ 0.07
LINC01440-207ENST00000625237 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
LINC01440-207ENST00000625237 FKBP8Q14318 412 aa15.34■□□□□ 0.05
LINC01440-207ENST00000625237 POTEDQ86YR6 584 aa15.31■□□□□ 0.04
LINC01440-207ENST00000625237 ZNF219Q9P2Y4 722 aaPredicted RBP15.27■□□□□ 0.04
LINC01440-207ENST00000625237 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
LINC01440-207ENST00000625237 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
LINC01440-207ENST00000625237 TRHP20396 242 aaPredicted RBP15.05■□□□□ -0
LINC01440-207ENST00000625237 SPINK5Q9NQ38 1064 aaPredicted RBP15.04■□□□□ -0
LINC01440-207ENST00000625237 CAPN15O75808 1086 aa15.02■□□□□ -0
LINC01440-207ENST00000625237 AMER1Q5JTC6 1135 aaPredicted RBP14.96□□□□□ -0.01
LINC01440-207ENST00000625237 FBLN2P98095 1184 aa14.95□□□□□ -0.02
LINC01440-207ENST00000625237 POLA2Q14181 598 aa14.92□□□□□ -0.02
LINC01440-207ENST00000625237 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
LINC01440-207ENST00000625237 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
LINC01440-207ENST00000625237 RTN4Q9NQC3 1192 aaKnown RBP14.82□□□□□ -0.04
LINC01440-207ENST00000625237 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
LINC01440-207ENST00000625237 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
LINC01440-207ENST00000625237 ABCB7O75027 752 aa14.72□□□□□ -0.05
LINC01440-207ENST00000625237 PROM2Q8N271 834 aa14.67□□□□□ -0.06
LINC01440-207ENST00000625237 DSG3P32926 999 aa14.62□□□□□ -0.07
LINC01440-207ENST00000625237 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
LINC01440-207ENST00000625237 VASPP50552 380 aaPredicted RBP14.45□□□□□ -0.1
LINC01440-207ENST00000625237 SPDYE2BA6NHP3 402 aa14.42□□□□□ -0.1
LINC01440-207ENST00000625237 SPDYE6P0CI01 402 aa14.42□□□□□ -0.1
LINC01440-207ENST00000625237 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
LINC01440-207ENST00000625237 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
LINC01440-207ENST00000625237 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
LINC01440-207ENST00000625237 SSUH2Q9Y2M2 353 aa14.32□□□□□ -0.12
LINC01440-207ENST00000625237 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
LINC01440-207ENST00000625237 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
LINC01440-207ENST00000625237 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
LINC01440-207ENST00000625237 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC01440-207ENST00000625237 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
LINC01440-207ENST00000625237 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
LINC01440-207ENST00000625237 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
LINC01440-207ENST00000625237 MIER1Q8N108 512 aa14.04□□□□□ -0.16
LINC01440-207ENST00000625237 PLEKHG5O94827 1062 aa14.02□□□□□ -0.17
LINC01440-207ENST00000625237 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
LINC01440-207ENST00000625237 PKD2Q13563 968 aa13.98□□□□□ -0.17
LINC01440-207ENST00000625237 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
LINC01440-207ENST00000625237 DCAF8L2P0C7V8 631 aa13.92□□□□□ -0.18
LINC01440-207ENST00000625237 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
LINC01440-207ENST00000625237 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
LINC01440-207ENST00000625237 ECM2O94769 699 aaPredicted RBP13.85□□□□□ -0.19
LINC01440-207ENST00000625237 PLCB2Q00722 1185 aa13.78□□□□□ -0.2
LINC01440-207ENST00000625237 CIZ1Q9ULV3 898 aaPredicted RBP13.74□□□□□ -0.21
LINC01440-207ENST00000625237 CLEC11AQ9Y240 323 aa13.74□□□□□ -0.21
LINC01440-207ENST00000625237 REM2Q8IYK8 340 aaPredicted RBP13.73□□□□□ -0.21
LINC01440-207ENST00000625237 PRR29P0C7W0 189 aa13.72□□□□□ -0.21
LINC01440-207ENST00000625237 TRIM41Q8WV44 630 aa13.72□□□□□ -0.21
LINC01440-207ENST00000625237 GSE1Q14687 1217 aa13.66□□□□□ -0.22
LINC01440-207ENST00000625237 RGL2O15211 777 aa13.65□□□□□ -0.22
LINC01440-207ENST00000625237 BBXQ8WY36 941 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-207ENST00000625237 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
LINC01440-207ENST00000625237 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
LINC01440-207ENST00000625237 NUBP1P53384 320 aa13.59□□□□□ -0.23
LINC01440-207ENST00000625237 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
LINC01440-207ENST00000625237 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
LINC01440-207ENST00000625237 DCAF8Q5TAQ9 597 aa13.54□□□□□ -0.24
LINC01440-207ENST00000625237 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
LINC01440-207ENST00000625237 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC01440-207ENST00000625237 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
LINC01440-207ENST00000625237 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
LINC01440-207ENST00000625237 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms