RNA–Protein interactions for RNA: ENST00000623318.1

ERCC6-211, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-211ENST00000623318 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
ERCC6-211ENST00000623318 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
ERCC6-211ENST00000623318 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
ERCC6-211ENST00000623318 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
ERCC6-211ENST00000623318 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
ERCC6-211ENST00000623318 FOXD1Q16676 465 aa17.22■□□□□ 0.35
ERCC6-211ENST00000623318 ADRA2BP18089 450 aa16.82■□□□□ 0.28
ERCC6-211ENST00000623318 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
ERCC6-211ENST00000623318 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
ERCC6-211ENST00000623318 KCNA4P22459 653 aa15.81■□□□□ 0.12
ERCC6-211ENST00000623318 MSH5O43196 834 aa15.79■□□□□ 0.12
ERCC6-211ENST00000623318 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
ERCC6-211ENST00000623318 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
ERCC6-211ENST00000623318 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
ERCC6-211ENST00000623318 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
ERCC6-211ENST00000623318 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
ERCC6-211ENST00000623318 MAPK8IP2Q13387 824 aaPredicted RBP15.14■□□□□ 0.01
ERCC6-211ENST00000623318 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
ERCC6-211ENST00000623318 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
ERCC6-211ENST00000623318 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
ERCC6-211ENST00000623318 DMRT2Q9Y5R5 561 aa14.93□□□□□ -0.02
ERCC6-211ENST00000623318 DNAJC5BQ9UF47 199 aa14.88□□□□□ -0.03
ERCC6-211ENST00000623318 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
ERCC6-211ENST00000623318 CSRNP3Q8WYN3 585 aa14.77□□□□□ -0.05
ERCC6-211ENST00000623318 ZBTB22O15209 634 aa14.53□□□□□ -0.08
ERCC6-211ENST00000623318 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
ERCC6-211ENST00000623318 SLC4A2P04920 1241 aa14.32□□□□□ -0.12
ERCC6-211ENST00000623318 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
ERCC6-211ENST00000623318 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
ERCC6-211ENST00000623318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
ERCC6-211ENST00000623318 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
ERCC6-211ENST00000623318 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
ERCC6-211ENST00000623318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.87□□□□□ -0.19
ERCC6-211ENST00000623318 HNRNPUL2Q1KMD3 747 aaKnown RBP13.87□□□□□ -0.19
ERCC6-211ENST00000623318 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
ERCC6-211ENST00000623318 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
ERCC6-211ENST00000623318 APLP2Q06481 763 aa13.65□□□□□ -0.22
ERCC6-211ENST00000623318 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
ERCC6-211ENST00000623318 RNF39Q9H2S5 420 aa13.55□□□□□ -0.24
ERCC6-211ENST00000623318 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
ERCC6-211ENST00000623318 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
ERCC6-211ENST00000623318 SPINK5Q9NQ38 1064 aaPredicted RBP13.33□□□□□ -0.28
ERCC6-211ENST00000623318 FKBP8Q14318 412 aa13.31□□□□□ -0.28
ERCC6-211ENST00000623318 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
ERCC6-211ENST00000623318 CAPN15O75808 1086 aa13.28□□□□□ -0.28
ERCC6-211ENST00000623318 POLA2Q14181 598 aa13.18□□□□□ -0.3
ERCC6-211ENST00000623318 FBLN2P98095 1184 aa13.11□□□□□ -0.31
ERCC6-211ENST00000623318 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
ERCC6-211ENST00000623318 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
ERCC6-211ENST00000623318 ABCB7O75027 752 aa13.02□□□□□ -0.33
ERCC6-211ENST00000623318 DSG3P32926 999 aa13□□□□□ -0.33
ERCC6-211ENST00000623318 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
ERCC6-211ENST00000623318 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
ERCC6-211ENST00000623318 PROM2Q8N271 834 aa12.87□□□□□ -0.35
ERCC6-211ENST00000623318 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
ERCC6-211ENST00000623318 AMER1Q5JTC6 1135 aaPredicted RBP12.8□□□□□ -0.36
ERCC6-211ENST00000623318 SPDYE2BA6NHP3 402 aa12.71□□□□□ -0.37
ERCC6-211ENST00000623318 SPDYE6P0CI01 402 aa12.71□□□□□ -0.37
ERCC6-211ENST00000623318 SPDYE2Q495Y8 402 aa12.71□□□□□ -0.37
ERCC6-211ENST00000623318 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
ERCC6-211ENST00000623318 OSCARQ8IYS5 282 aa12.69□□□□□ -0.38
ERCC6-211ENST00000623318 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
ERCC6-211ENST00000623318 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
ERCC6-211ENST00000623318 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
ERCC6-211ENST00000623318 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
ERCC6-211ENST00000623318 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
ERCC6-211ENST00000623318 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
ERCC6-211ENST00000623318 RBM42Q9BTD8 480 aaKnown RBP12.42□□□□□ -0.42
ERCC6-211ENST00000623318 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
ERCC6-211ENST00000623318 PLCD3Q8N3E9 789 aa12.29□□□□□ -0.44
ERCC6-211ENST00000623318 MIER1Q8N108 512 aa12.27□□□□□ -0.45
ERCC6-211ENST00000623318 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
ERCC6-211ENST00000623318 SPDYE1Q8NFV5 336 aaPredicted RBP12.24□□□□□ -0.45
ERCC6-211ENST00000623318 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
ERCC6-211ENST00000623318 PLEKHG5O94827 1062 aa12.23□□□□□ -0.45
ERCC6-211ENST00000623318 ZBTB47Q9UFB7 747 aaPredicted RBP12.2□□□□□ -0.46
ERCC6-211ENST00000623318 REM2Q8IYK8 340 aaPredicted RBP12.18□□□□□ -0.46
ERCC6-211ENST00000623318 PKD2Q13563 968 aa12.15□□□□□ -0.46
ERCC6-211ENST00000623318 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
ERCC6-211ENST00000623318 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
ERCC6-211ENST00000623318 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
ERCC6-211ENST00000623318 PITPNM1O00562 1244 aa12.02□□□□□ -0.49
ERCC6-211ENST00000623318 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
ERCC6-211ENST00000623318 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
ERCC6-211ENST00000623318 CIZ1Q9ULV3 898 aaPredicted RBP11.96□□□□□ -0.49
ERCC6-211ENST00000623318 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
ERCC6-211ENST00000623318 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
ERCC6-211ENST00000623318 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
ERCC6-211ENST00000623318 NUBP1P53384 320 aa11.94□□□□□ -0.5
ERCC6-211ENST00000623318 GSE1Q14687 1217 aa11.93□□□□□ -0.5
ERCC6-211ENST00000623318 RGL2O15211 777 aa11.86□□□□□ -0.51
ERCC6-211ENST00000623318 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
ERCC6-211ENST00000623318 FAM212AQ96EL1 285 aa11.84□□□□□ -0.51
ERCC6-211ENST00000623318 DCAF8Q5TAQ9 597 aa11.83□□□□□ -0.52
ERCC6-211ENST00000623318 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
ERCC6-211ENST00000623318 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
ERCC6-211ENST00000623318 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
ERCC6-211ENST00000623318 FXR2P51116 673 aaKnown RBP eCLIP11.76□□□□□ -0.53
ERCC6-211ENST00000623318 CHADLQ6NUI6 762 aa11.76□□□□□ -0.53
ERCC6-211ENST00000623318 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms