RNA–Protein interactions for RNA: ENST00000622928.1

LINC01727-201, Transcript of long intergenic non-protein coding RNA 1727, humanhuman

TSL 5

Gene LINC01727, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01727-201ENST00000622928 AEBP2Q6ZN18 517 aaPredicted RBP29.93■■■□□ 2.38
LINC01727-201ENST00000622928 CHIC1Q5VXU3 224 aa28.55■■■□□ 2.16
LINC01727-201ENST00000622928 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
LINC01727-201ENST00000622928 PHF23Q9BUL5 403 aaPredicted RBP25.24■■□□□ 1.63
LINC01727-201ENST00000622928 FOXD1Q16676 465 aa23.78■■□□□ 1.4
LINC01727-201ENST00000622928 PLPPR3Q6T4P5 718 aa22.9■■□□□ 1.26
LINC01727-201ENST00000622928 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
LINC01727-201ENST00000622928 ADRA2BP18089 450 aa22.29■■□□□ 1.16
LINC01727-201ENST00000622928 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
LINC01727-201ENST00000622928 MSH5O43196 834 aa22.22■■□□□ 1.15
LINC01727-201ENST00000622928 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
LINC01727-201ENST00000622928 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
LINC01727-201ENST00000622928 SCAF1Q9H7N4 1312 aaKnown RBP20.43■□□□□ 0.86
LINC01727-201ENST00000622928 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
LINC01727-201ENST00000622928 PPP4R3CPQ6ZMV5 832 aa20.09■□□□□ 0.81
LINC01727-201ENST00000622928 CNKSR2Q8WXI2 1034 aa19.68■□□□□ 0.74
LINC01727-201ENST00000622928 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
LINC01727-201ENST00000622928 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
LINC01727-201ENST00000622928 RNF216Q9NWF9 866 aaPredicted RBP19.46■□□□□ 0.71
LINC01727-201ENST00000622928 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
LINC01727-201ENST00000622928 NPM3O75607 178 aaKnown RBP19.06■□□□□ 0.64
LINC01727-201ENST00000622928 CACNB1Q02641 598 aaPredicted RBP19.03■□□□□ 0.64
LINC01727-201ENST00000622928 RNF39Q9H2S5 420 aa18.95■□□□□ 0.62
LINC01727-201ENST00000622928 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
LINC01727-201ENST00000622928 KCNA4P22459 653 aa18.81■□□□□ 0.6
LINC01727-201ENST00000622928 C1QBPQ07021 282 aaKnown RBP18.71■□□□□ 0.59
LINC01727-201ENST00000622928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
LINC01727-201ENST00000622928 U3KPZ7 1027 aaPredicted RBP18.27■□□□□ 0.52
LINC01727-201ENST00000622928 SLC4A2P04920 1241 aa18.16■□□□□ 0.5
LINC01727-201ENST00000622928 CAPN15O75808 1086 aa17.98■□□□□ 0.47
LINC01727-201ENST00000622928 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
LINC01727-201ENST00000622928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.83■□□□□ 0.44
LINC01727-201ENST00000622928 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
LINC01727-201ENST00000622928 APLP2Q06481 763 aa17.81■□□□□ 0.44
LINC01727-201ENST00000622928 DSG3P32926 999 aa17.8■□□□□ 0.44
LINC01727-201ENST00000622928 SLC4A1APQ9BWU0 796 aaKnown RBP17.8■□□□□ 0.44
LINC01727-201ENST00000622928 TRHP20396 242 aaPredicted RBP17.73■□□□□ 0.43
LINC01727-201ENST00000622928 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
LINC01727-201ENST00000622928 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
LINC01727-201ENST00000622928 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
LINC01727-201ENST00000622928 ABCB7O75027 752 aa17.56■□□□□ 0.4
LINC01727-201ENST00000622928 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
LINC01727-201ENST00000622928 ZBTB22O15209 634 aa17.26■□□□□ 0.35
LINC01727-201ENST00000622928 POLA2Q14181 598 aa17.26■□□□□ 0.35
LINC01727-201ENST00000622928 ATF5Q9Y2D1 282 aaPredicted RBP17.2■□□□□ 0.34
LINC01727-201ENST00000622928 RBM42Q9BTD8 480 aaKnown RBP17.01■□□□□ 0.31
LINC01727-201ENST00000622928 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
LINC01727-201ENST00000622928 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
LINC01727-201ENST00000622928 POTEHQ6S545 545 aa16.86■□□□□ 0.29
LINC01727-201ENST00000622928 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
LINC01727-201ENST00000622928 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
LINC01727-201ENST00000622928 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
LINC01727-201ENST00000622928 FBLN2P98095 1184 aa16.58■□□□□ 0.24
LINC01727-201ENST00000622928 CHRDL2Q6WN34 429 aa16.57■□□□□ 0.24
LINC01727-201ENST00000622928 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
LINC01727-201ENST00000622928 REM2Q8IYK8 340 aaPredicted RBP16.48■□□□□ 0.23
LINC01727-201ENST00000622928 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
LINC01727-201ENST00000622928 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
LINC01727-201ENST00000622928 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
LINC01727-201ENST00000622928 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
LINC01727-201ENST00000622928 PITPNM1O00562 1244 aa16.29■□□□□ 0.2
LINC01727-201ENST00000622928 ZNF692Q9BU19 519 aaPredicted RBP16.25■□□□□ 0.19
LINC01727-201ENST00000622928 PIP4P2Q8N4L2 257 aa16.2■□□□□ 0.18
LINC01727-201ENST00000622928 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
LINC01727-201ENST00000622928 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
LINC01727-201ENST00000622928 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
LINC01727-201ENST00000622928 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
LINC01727-201ENST00000622928 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
LINC01727-201ENST00000622928 HAX1O00165 279 aa15.93■□□□□ 0.14
LINC01727-201ENST00000622928 PRKAR2AP13861 404 aaKnown RBP15.89■□□□□ 0.13
LINC01727-201ENST00000622928 SP7Q8TDD2 431 aaPredicted RBP15.86■□□□□ 0.13
LINC01727-201ENST00000622928 PRR29P0C7W0 189 aa15.83■□□□□ 0.12
LINC01727-201ENST00000622928 CHADLQ6NUI6 762 aa15.75■□□□□ 0.11
LINC01727-201ENST00000622928 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
LINC01727-201ENST00000622928 EVX2Q03828 476 aa15.68■□□□□ 0.1
LINC01727-201ENST00000622928 C19orf67A6NJJ6 358 aa15.6■□□□□ 0.09
LINC01727-201ENST00000622928 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
LINC01727-201ENST00000622928 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
LINC01727-201ENST00000622928 CREBZFQ9NS37 354 aa15.42■□□□□ 0.06
LINC01727-201ENST00000622928 CD44P16070 742 aaKnown RBP15.4■□□□□ 0.06
LINC01727-201ENST00000622928 GABBR2O75899 941 aa15.36■□□□□ 0.05
LINC01727-201ENST00000622928 PROM2Q8N271 834 aa15.31■□□□□ 0.04
LINC01727-201ENST00000622928 ZRANB1Q9UGI0 708 aa15.21■□□□□ 0.03
LINC01727-201ENST00000622928 NPM1P06748 294 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC01727-201ENST00000622928 CLCN6P51797 869 aa15.16■□□□□ 0.02
LINC01727-201ENST00000622928 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
LINC01727-201ENST00000622928 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
LINC01727-201ENST00000622928 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
LINC01727-201ENST00000622928 FKBP8Q14318 412 aa15.09■□□□□ 0.01
LINC01727-201ENST00000622928 MIER1Q8N108 512 aa15.04■□□□□ -0
LINC01727-201ENST00000622928 PLEKHG5O94827 1062 aa15.02■□□□□ -0
LINC01727-201ENST00000622928 DCBLD2Q96PD2 775 aa15.01□□□□□ -0.01
LINC01727-201ENST00000622928 POTEIP0CG38 1075 aa15□□□□□ -0.01
LINC01727-201ENST00000622928 PHF12Q96QT6 1004 aa14.99□□□□□ -0.01
LINC01727-201ENST00000622928 GALR2O43603 387 aaPredicted RBP14.96□□□□□ -0.01
LINC01727-201ENST00000622928 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
LINC01727-201ENST00000622928 TSPYL2Q9H2G4 693 aaPredicted RBP14.93□□□□□ -0.02
LINC01727-201ENST00000622928 LHX8Q68G74 356 aa14.9□□□□□ -0.02
LINC01727-201ENST00000622928 CCDC61Q9Y6R9 512 aa14.8□□□□□ -0.04
LINC01727-201ENST00000622928 MS4A3Q96HJ5 214 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms