RNA–Protein interactions for RNA: ENST00000621371.4

PDE4DIP-250, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 3

Gene PDE4DIP, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-250ENST00000621371 AEBP2Q6ZN18 517 aaPredicted RBP20.31■□□□□ 0.84
PDE4DIP-250ENST00000621371 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
PDE4DIP-250ENST00000621371 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
PDE4DIP-250ENST00000621371 PHF23Q9BUL5 403 aaPredicted RBP17.2■□□□□ 0.34
PDE4DIP-250ENST00000621371 FOXD1Q16676 465 aa16.04■□□□□ 0.16
PDE4DIP-250ENST00000621371 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
PDE4DIP-250ENST00000621371 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
PDE4DIP-250ENST00000621371 PPP6R1Q9UPN7 881 aa15.23■□□□□ 0.03
PDE4DIP-250ENST00000621371 ADRA2BP18089 450 aa15.17■□□□□ 0.02
PDE4DIP-250ENST00000621371 MSH5O43196 834 aa15.04■□□□□ -0
PDE4DIP-250ENST00000621371 PIAS4Q8N2W9 510 aaPredicted RBP15.03■□□□□ -0
PDE4DIP-250ENST00000621371 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
PDE4DIP-250ENST00000621371 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
PDE4DIP-250ENST00000621371 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
PDE4DIP-250ENST00000621371 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
PDE4DIP-250ENST00000621371 CNKSR2Q8WXI2 1034 aa13.53□□□□□ -0.24
PDE4DIP-250ENST00000621371 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
PDE4DIP-250ENST00000621371 NCBP3Q53F19 620 aaKnown RBP13.38□□□□□ -0.27
PDE4DIP-250ENST00000621371 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
PDE4DIP-250ENST00000621371 CACNB1Q02641 598 aaPredicted RBP13.3□□□□□ -0.28
PDE4DIP-250ENST00000621371 KCNA4P22459 653 aa13.26□□□□□ -0.29
PDE4DIP-250ENST00000621371 NPM3O75607 178 aaKnown RBP13.24□□□□□ -0.29
PDE4DIP-250ENST00000621371 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
PDE4DIP-250ENST00000621371 DNAJC5BQ9UF47 199 aa13□□□□□ -0.33
PDE4DIP-250ENST00000621371 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
PDE4DIP-250ENST00000621371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■□□□ 12
PDE4DIP-250ENST00000621371 SLC4A2P04920 1241 aa12.58□□□□□ -0.4
PDE4DIP-250ENST00000621371 C1QBPQ07021 282 aaKnown RBP12.55□□□□□ -0.4
PDE4DIP-250ENST00000621371 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
PDE4DIP-250ENST00000621371 U3KPZ7 1027 aaPredicted RBP12.5□□□□□ -0.41
PDE4DIP-250ENST00000621371 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
PDE4DIP-250ENST00000621371 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
PDE4DIP-250ENST00000621371 ZBTB22O15209 634 aa12.23□□□□□ -0.45
PDE4DIP-250ENST00000621371 POTEHQ6S545 545 aa12.22□□□□□ -0.45
PDE4DIP-250ENST00000621371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
PDE4DIP-250ENST00000621371 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
PDE4DIP-250ENST00000621371 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
PDE4DIP-250ENST00000621371 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
PDE4DIP-250ENST00000621371 APLP2Q06481 763 aa12.13□□□□□ -0.47
PDE4DIP-250ENST00000621371 CAPN15O75808 1086 aa12.1□□□□□ -0.47
PDE4DIP-250ENST00000621371 DSG3P32926 999 aa12.03□□□□□ -0.48
PDE4DIP-250ENST00000621371 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
PDE4DIP-250ENST00000621371 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
PDE4DIP-250ENST00000621371 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
PDE4DIP-250ENST00000621371 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
PDE4DIP-250ENST00000621371 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
PDE4DIP-250ENST00000621371 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
PDE4DIP-250ENST00000621371 ABCB7O75027 752 aa11.86□□□□□ -0.51
PDE4DIP-250ENST00000621371 POLA2Q14181 598 aa11.75□□□□□ -0.53
PDE4DIP-250ENST00000621371 ZBTB12Q9Y330 459 aaPredicted RBP11.57□□□□□ -0.56
PDE4DIP-250ENST00000621371 RBM42Q9BTD8 480 aaKnown RBP11.44□□□□□ -0.58
PDE4DIP-250ENST00000621371 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
PDE4DIP-250ENST00000621371 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
PDE4DIP-250ENST00000621371 FBLN2P98095 1184 aa11.39□□□□□ -0.59
PDE4DIP-250ENST00000621371 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
PDE4DIP-250ENST00000621371 SPDYE2BA6NHP3 402 aa11.25□□□□□ -0.61
PDE4DIP-250ENST00000621371 SPDYE6P0CI01 402 aa11.25□□□□□ -0.61
PDE4DIP-250ENST00000621371 SPDYE2Q495Y8 402 aa11.25□□□□□ -0.61
PDE4DIP-250ENST00000621371 CHRDL2Q6WN34 429 aa11.18□□□□□ -0.62
PDE4DIP-250ENST00000621371 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
PDE4DIP-250ENST00000621371 REM2Q8IYK8 340 aaPredicted RBP11.15□□□□□ -0.62
PDE4DIP-250ENST00000621371 SP7Q8TDD2 431 aaPredicted RBP11.14□□□□□ -0.63
PDE4DIP-250ENST00000621371 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
PDE4DIP-250ENST00000621371 PITPNM1O00562 1244 aa11.04□□□□□ -0.64
PDE4DIP-250ENST00000621371 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
PDE4DIP-250ENST00000621371 PABPN1Q86U42 306 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDE4DIP-250ENST00000621371 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
PDE4DIP-250ENST00000621371 FXR2P51116 673 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDE4DIP-250ENST00000621371 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
PDE4DIP-250ENST00000621371 PROM2Q8N271 834 aa10.88□□□□□ -0.67
PDE4DIP-250ENST00000621371 CLEC11AQ9Y240 323 aa10.86□□□□□ -0.67
PDE4DIP-250ENST00000621371 HAX1O00165 279 aa10.81□□□□□ -0.68
PDE4DIP-250ENST00000621371 FKBP8Q14318 412 aa10.75□□□□□ -0.69
PDE4DIP-250ENST00000621371 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
PDE4DIP-250ENST00000621371 PRR29P0C7W0 189 aa10.74□□□□□ -0.69
PDE4DIP-250ENST00000621371 PRKAR2AP13861 404 aaKnown RBP10.72□□□□□ -0.69
PDE4DIP-250ENST00000621371 CHADLQ6NUI6 762 aa10.67□□□□□ -0.7
PDE4DIP-250ENST00000621371 CREBZFQ9NS37 354 aa10.63□□□□□ -0.71
PDE4DIP-250ENST00000621371 FARP1Q9Y4F1 1045 aaPredicted RBP10.55□□□□□ -0.72
PDE4DIP-250ENST00000621371 C19orf67A6NJJ6 358 aa10.54□□□□□ -0.72
PDE4DIP-250ENST00000621371 MNX1P50219 401 aaPredicted RBP10.52□□□□□ -0.73
PDE4DIP-250ENST00000621371 EVX2Q03828 476 aa10.49□□□□□ -0.73
PDE4DIP-250ENST00000621371 LHX8Q68G74 356 aa10.46□□□□□ -0.73
PDE4DIP-250ENST00000621371 FBXO3Q9UK99 471 aa10.43□□□□□ -0.74
PDE4DIP-250ENST00000621371 CD44P16070 742 aaKnown RBP10.41□□□□□ -0.74
PDE4DIP-250ENST00000621371 PLSCR2Q9NRY7 297 aa10.41□□□□□ -0.74
PDE4DIP-250ENST00000621371 NPM1P06748 294 aaKnown RBP eCLIP10.39□□□□□ -0.75
PDE4DIP-250ENST00000621371 MIER1Q8N108 512 aa10.39□□□□□ -0.75
PDE4DIP-250ENST00000621371 PLEKHG5O94827 1062 aa10.35□□□□□ -0.75
PDE4DIP-250ENST00000621371 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
PDE4DIP-250ENST00000621371 VASPP50552 380 aaPredicted RBP10.33□□□□□ -0.76
PDE4DIP-250ENST00000621371 ZNF579Q8NAF0 562 aaKnown RBP10.31□□□□□ -0.76
PDE4DIP-250ENST00000621371 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
PDE4DIP-250ENST00000621371 ZRANB1Q9UGI0 708 aa10.29□□□□□ -0.76
PDE4DIP-250ENST00000621371 GABBR2O75899 941 aa10.26□□□□□ -0.77
PDE4DIP-250ENST00000621371 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
PDE4DIP-250ENST00000621371 NUBP1P53384 320 aa10.25□□□□□ -0.77
PDE4DIP-250ENST00000621371 RASEFQ8IZ41 740 aa10.25□□□□□ -0.77
PDE4DIP-250ENST00000621371 CLCN6P51797 869 aa10.23□□□□□ -0.77
PDE4DIP-250ENST00000621371 CCDC61Q9Y6R9 512 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms