RNA–Protein interactions for RNA: ENST00000621104.4

CCDC144B-209, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 2

Gene CCDC144B, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-209ENST00000621104 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
CCDC144B-209ENST00000621104 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
CCDC144B-209ENST00000621104 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
CCDC144B-209ENST00000621104 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
CCDC144B-209ENST00000621104 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
CCDC144B-209ENST00000621104 FOXD1Q16676 465 aa17.66■□□□□ 0.42
CCDC144B-209ENST00000621104 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
CCDC144B-209ENST00000621104 MSH5O43196 834 aa16.91■□□□□ 0.3
CCDC144B-209ENST00000621104 PPP6R1Q9UPN7 881 aa16.51■□□□□ 0.23
CCDC144B-209ENST00000621104 ADRA2BP18089 450 aa16.48■□□□□ 0.23
CCDC144B-209ENST00000621104 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
CCDC144B-209ENST00000621104 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
CCDC144B-209ENST00000621104 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
CCDC144B-209ENST00000621104 CACNB1Q02641 598 aaPredicted RBP15.17■□□□□ 0.02
CCDC144B-209ENST00000621104 MAPK8IP2Q13387 824 aaPredicted RBP14.96□□□□□ -0.01
CCDC144B-209ENST00000621104 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
CCDC144B-209ENST00000621104 CNKSR2Q8WXI2 1034 aa14.84□□□□□ -0.03
CCDC144B-209ENST00000621104 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
CCDC144B-209ENST00000621104 KCNA4P22459 653 aa14.72□□□□□ -0.05
CCDC144B-209ENST00000621104 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
CCDC144B-209ENST00000621104 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
CCDC144B-209ENST00000621104 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
CCDC144B-209ENST00000621104 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
CCDC144B-209ENST00000621104 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
CCDC144B-209ENST00000621104 POTEHQ6S545 545 aa14.19□□□□□ -0.14
CCDC144B-209ENST00000621104 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
CCDC144B-209ENST00000621104 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
CCDC144B-209ENST00000621104 SLC4A1APQ9BWU0 796 aaKnown RBP14.02□□□□□ -0.17
CCDC144B-209ENST00000621104 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
CCDC144B-209ENST00000621104 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
CCDC144B-209ENST00000621104 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
CCDC144B-209ENST00000621104 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
CCDC144B-209ENST00000621104 ZBTB22O15209 634 aa13.53□□□□□ -0.24
CCDC144B-209ENST00000621104 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
CCDC144B-209ENST00000621104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
CCDC144B-209ENST00000621104 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
CCDC144B-209ENST00000621104 EHMT2Q96KQ7 1210 aa13.44□□□□□ -0.26
CCDC144B-209ENST00000621104 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
CCDC144B-209ENST00000621104 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
CCDC144B-209ENST00000621104 APLP2Q06481 763 aa13.36□□□□□ -0.27
CCDC144B-209ENST00000621104 ATXN8OSP0DMR3 200 aa13.21□□□□□ -0.29
CCDC144B-209ENST00000621104 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
CCDC144B-209ENST00000621104 CAPN15O75808 1086 aa13.16□□□□□ -0.3
CCDC144B-209ENST00000621104 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
CCDC144B-209ENST00000621104 DSG3P32926 999 aa13.08□□□□□ -0.32
CCDC144B-209ENST00000621104 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
CCDC144B-209ENST00000621104 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
CCDC144B-209ENST00000621104 ABCB7O75027 752 aa12.87□□□□□ -0.35
CCDC144B-209ENST00000621104 POLA2Q14181 598 aa12.84□□□□□ -0.35
CCDC144B-209ENST00000621104 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
CCDC144B-209ENST00000621104 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
CCDC144B-209ENST00000621104 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
CCDC144B-209ENST00000621104 FBLN2P98095 1184 aa12.59□□□□□ -0.39
CCDC144B-209ENST00000621104 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
CCDC144B-209ENST00000621104 RBM42Q9BTD8 480 aaKnown RBP12.46□□□□□ -0.41
CCDC144B-209ENST00000621104 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
CCDC144B-209ENST00000621104 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
CCDC144B-209ENST00000621104 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
CCDC144B-209ENST00000621104 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
CCDC144B-209ENST00000621104 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
CCDC144B-209ENST00000621104 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
CCDC144B-209ENST00000621104 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-209ENST00000621104 SPDYE4A6NLX3 237 aa12.2□□□□□ -0.46
CCDC144B-209ENST00000621104 HAX1O00165 279 aa12.17□□□□□ -0.46
CCDC144B-209ENST00000621104 PIP4P2Q8N4L2 257 aa12.13□□□□□ -0.47
CCDC144B-209ENST00000621104 PLSCR2Q9NRY7 297 aa12.11□□□□□ -0.47
CCDC144B-209ENST00000621104 FKBP8Q14318 412 aa12.09□□□□□ -0.47
CCDC144B-209ENST00000621104 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
CCDC144B-209ENST00000621104 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CCDC144B-209ENST00000621104 PABPN1Q86U42 306 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCDC144B-209ENST00000621104 EVX2Q03828 476 aa12.01□□□□□ -0.49
CCDC144B-209ENST00000621104 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
CCDC144B-209ENST00000621104 LHX8Q68G74 356 aa11.97□□□□□ -0.49
CCDC144B-209ENST00000621104 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
CCDC144B-209ENST00000621104 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
CCDC144B-209ENST00000621104 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC144B-209ENST00000621104 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
CCDC144B-209ENST00000621104 PRR29P0C7W0 189 aa11.78□□□□□ -0.52
CCDC144B-209ENST00000621104 FBXO3Q9UK99 471 aa11.78□□□□□ -0.52
CCDC144B-209ENST00000621104 GABBR2O75899 941 aa11.64□□□□□ -0.55
CCDC144B-209ENST00000621104 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-209ENST00000621104 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
CCDC144B-209ENST00000621104 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
CCDC144B-209ENST00000621104 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
CCDC144B-209ENST00000621104 CHADLQ6NUI6 762 aa11.57□□□□□ -0.56
CCDC144B-209ENST00000621104 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
CCDC144B-209ENST00000621104 MIER1Q8N108 512 aa11.55□□□□□ -0.56
CCDC144B-209ENST00000621104 PLCD3Q8N3E9 789 aa11.54□□□□□ -0.56
CCDC144B-209ENST00000621104 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-209ENST00000621104 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-209ENST00000621104 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
CCDC144B-209ENST00000621104 NPM1P06748 294 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCDC144B-209ENST00000621104 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
CCDC144B-209ENST00000621104 IFNLR1Q8IU57 520 aaPredicted RBP11.38□□□□□ -0.59
CCDC144B-209ENST00000621104 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CCDC144B-209ENST00000621104 POTEMA6NI47 508 aa11.33□□□□□ -0.6
CCDC144B-209ENST00000621104 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
CCDC144B-209ENST00000621104 NUBP1P53384 320 aa11.31□□□□□ -0.6
CCDC144B-209ENST00000621104 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
CCDC144B-209ENST00000621104 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms