RNA–Protein interactions for RNA: ENST00000618575.1

ACACA-243, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 4

Gene ACACA, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-243ENST00000618575 AEBP2Q6ZN18 517 aaPredicted RBP37.08■■■■□ 3.53
ACACA-243ENST00000618575 CHIC1Q5VXU3 224 aa35.21■■■■□ 3.23
ACACA-243ENST00000618575 SENP3Q9H4L4 574 aaPredicted RBP31.68■■■□□ 2.66
ACACA-243ENST00000618575 PHF23Q9BUL5 403 aaPredicted RBP31.17■■■□□ 2.58
ACACA-243ENST00000618575 FOXD1Q16676 465 aa29.47■■■□□ 2.31
ACACA-243ENST00000618575 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
ACACA-243ENST00000618575 MSH5O43196 834 aa27.67■■■□□ 2.02
ACACA-243ENST00000618575 PIAS4Q8N2W9 510 aaPredicted RBP27.48■■□□□ 1.99
ACACA-243ENST00000618575 PPP6R1Q9UPN7 881 aa27.48■■□□□ 1.99
ACACA-243ENST00000618575 ADRA2BP18089 450 aa27.34■■□□□ 1.97
ACACA-243ENST00000618575 POTEDQ86YR6 584 aa27.02■■□□□ 1.92
ACACA-243ENST00000618575 DMRT2Q9Y5R5 561 aa25.14■■□□□ 1.62
ACACA-243ENST00000618575 MAPK8IP2Q13387 824 aaPredicted RBP25.09■■□□□ 1.61
ACACA-243ENST00000618575 SCAF1Q9H7N4 1312 aaKnown RBP25.09■■□□□ 1.61
ACACA-243ENST00000618575 PPP4R3CPQ6ZMV5 832 aa24.55■■□□□ 1.52
ACACA-243ENST00000618575 HOXD11P31277 338 aaPredicted RBP24.23■■□□□ 1.47
ACACA-243ENST00000618575 CNKSR2Q8WXI2 1034 aa24.17■■□□□ 1.46
ACACA-243ENST00000618575 RNF216Q9NWF9 866 aaPredicted RBP24■■□□□ 1.43
ACACA-243ENST00000618575 DCAF8L1A6NGE4 600 aa23.82■■□□□ 1.4
ACACA-243ENST00000618575 CACNB1Q02641 598 aaPredicted RBP23.62■■□□□ 1.37
ACACA-243ENST00000618575 NCBP3Q53F19 620 aaKnown RBP23.62■■□□□ 1.37
ACACA-243ENST00000618575 RNF39Q9H2S5 420 aa23.62■■□□□ 1.37
ACACA-243ENST00000618575 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
ACACA-243ENST00000618575 NPM3O75607 178 aaKnown RBP23.28■■□□□ 1.32
ACACA-243ENST00000618575 C1QBPQ07021 282 aaKnown RBP23.26■■□□□ 1.31
ACACA-243ENST00000618575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.88■■□□□ 1.253e-9■■□□□ 11.8
ACACA-243ENST00000618575 KCNA4P22459 653 aa22.75■■□□□ 1.23
ACACA-243ENST00000618575 U3KPZ7 1027 aaPredicted RBP22.52■■□□□ 1.2
ACACA-243ENST00000618575 SLC4A2P04920 1241 aa22.27■■□□□ 1.16
ACACA-243ENST00000618575 SPINK5Q9NQ38 1064 aaPredicted RBP22.12■■□□□ 1.13
ACACA-243ENST00000618575 DSG3P32926 999 aa22.05■■□□□ 1.12
ACACA-243ENST00000618575 CAPN15O75808 1086 aa22.02■■□□□ 1.12
ACACA-243ENST00000618575 APLP2Q06481 763 aa21.92■■□□□ 1.1
ACACA-243ENST00000618575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.89■■□□□ 1.09
ACACA-243ENST00000618575 HNRNPUL2Q1KMD3 747 aaKnown RBP21.89■■□□□ 1.09
ACACA-243ENST00000618575 ZNF219Q9P2Y4 722 aaPredicted RBP21.79■■□□□ 1.08
ACACA-243ENST00000618575 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
ACACA-243ENST00000618575 TRHP20396 242 aaPredicted RBP21.64■■□□□ 1.05
ACACA-243ENST00000618575 MYCNP04198 464 aaPredicted RBP21.58■■□□□ 1.05
ACACA-243ENST00000618575 ABCB7O75027 752 aa21.5■■□□□ 1.03
ACACA-243ENST00000618575 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
ACACA-243ENST00000618575 FOXD4L1Q9NU39 408 aa21.31■■□□□ 1
ACACA-243ENST00000618575 POTEHQ6S545 545 aa21.15■□□□□ 0.98
ACACA-243ENST00000618575 POLA2Q14181 598 aa21.1■□□□□ 0.97
ACACA-243ENST00000618575 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.97
ACACA-243ENST00000618575 ATF5Q9Y2D1 282 aaPredicted RBP20.99■□□□□ 0.95
ACACA-243ENST00000618575 ZBTB22O15209 634 aa20.96■□□□□ 0.95
ACACA-243ENST00000618575 ZBTB12Q9Y330 459 aaPredicted RBP20.83■□□□□ 0.93
ACACA-243ENST00000618575 ATXN8OSP0DMR3 200 aa20.75■□□□□ 0.91
ACACA-243ENST00000618575 CHRDL2Q6WN34 429 aa20.58■□□□□ 0.89
ACACA-243ENST00000618575 AKT1S1Q96B36 256 aa20.58■□□□□ 0.89
ACACA-243ENST00000618575 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
ACACA-243ENST00000618575 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
ACACA-243ENST00000618575 FBLN2P98095 1184 aa20.19■□□□□ 0.82
ACACA-243ENST00000618575 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
ACACA-243ENST00000618575 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
ACACA-243ENST00000618575 SPDYE2Q495Y8 402 aa20.17■□□□□ 0.82
ACACA-243ENST00000618575 PITPNM1O00562 1244 aa20.12■□□□□ 0.81
ACACA-243ENST00000618575 PIP4P2Q8N4L2 257 aa20.09■□□□□ 0.81
ACACA-243ENST00000618575 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
ACACA-243ENST00000618575 FXR2P51116 673 aaKnown RBP eCLIP20.01■□□□□ 0.794e-6■■□□□ 13.3
ACACA-243ENST00000618575 SSUH2Q9Y2M2 353 aa19.94■□□□□ 0.78
ACACA-243ENST00000618575 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
ACACA-243ENST00000618575 SP7Q8TDD2 431 aaPredicted RBP19.84■□□□□ 0.77
ACACA-243ENST00000618575 SPDYE1Q8NFV5 336 aaPredicted RBP19.78■□□□□ 0.76
ACACA-243ENST00000618575 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
ACACA-243ENST00000618575 HAX1O00165 279 aa19.6■□□□□ 0.73
ACACA-243ENST00000618575 CLEC11AQ9Y240 323 aa19.57■□□□□ 0.72
ACACA-243ENST00000618575 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
ACACA-243ENST00000618575 PABPN1Q86U42 306 aaKnown RBP eCLIP19.5■□□□□ 0.71
ACACA-243ENST00000618575 EHMT2Q96KQ7 1210 aa19.47■□□□□ 0.71
ACACA-243ENST00000618575 EVX2Q03828 476 aa19.41■□□□□ 0.7
ACACA-243ENST00000618575 C19orf67A6NJJ6 358 aa19.37■□□□□ 0.69
ACACA-243ENST00000618575 PRR29P0C7W0 189 aa19.32■□□□□ 0.68
ACACA-243ENST00000618575 CHADLQ6NUI6 762 aa19.24■□□□□ 0.67
ACACA-243ENST00000618575 FARP1Q9Y4F1 1045 aaPredicted RBP19.06■□□□□ 0.64
ACACA-243ENST00000618575 SPDYE4A6NLX3 237 aa19.05■□□□□ 0.64
ACACA-243ENST00000618575 STAG3Q9UJ98 1225 aa19.04■□□□□ 0.64
ACACA-243ENST00000618575 GABBR2O75899 941 aa19.01■□□□□ 0.63
ACACA-243ENST00000618575 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
ACACA-243ENST00000618575 CREBZFQ9NS37 354 aa18.92■□□□□ 0.62
ACACA-243ENST00000618575 CLCN6P51797 869 aa18.86■□□□□ 0.61
ACACA-243ENST00000618575 PROM2Q8N271 834 aa18.8■□□□□ 0.6
ACACA-243ENST00000618575 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
ACACA-243ENST00000618575 MNX1P50219 401 aaPredicted RBP18.65■□□□□ 0.58
ACACA-243ENST00000618575 POTEIP0CG38 1075 aa18.64■□□□□ 0.57
ACACA-243ENST00000618575 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
ACACA-243ENST00000618575 NPM1P06748 294 aaKnown RBP eCLIP18.54■□□□□ 0.56
ACACA-243ENST00000618575 LHX8Q68G74 356 aa18.54■□□□□ 0.56
ACACA-243ENST00000618575 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
ACACA-243ENST00000618575 DCBLD2Q96PD2 775 aa18.43■□□□□ 0.54
ACACA-243ENST00000618575 GALR2O43603 387 aaPredicted RBP18.41■□□□□ 0.54
ACACA-243ENST00000618575 PHF12Q96QT6 1004 aa18.37■□□□□ 0.53
ACACA-243ENST00000618575 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
ACACA-243ENST00000618575 MS4A3Q96HJ5 214 aa18.17■□□□□ 0.5
ACACA-243ENST00000618575 ASTLQ6HA08 431 aaPredicted RBP18.14■□□□□ 0.49
ACACA-243ENST00000618575 PLEKHG5O94827 1062 aa18.13■□□□□ 0.49
ACACA-243ENST00000618575 TSPYL2Q9H2G4 693 aaPredicted RBP18.08■□□□□ 0.48
ACACA-243ENST00000618575 MIER1Q8N108 512 aa18.07■□□□□ 0.48
ACACA-243ENST00000618575 PELP1Q8IZL8 1130 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms