RNA–Protein interactions for RNA: ENST00000618283.1

GPC5-203, Transcript of glypican 5, humanhuman

TSL 3

Gene GPC5, Length 610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC5-203ENST00000618283 AEBP2Q6ZN18 517 aaPredicted RBP35.5■■■■□ 3.27
GPC5-203ENST00000618283 CHIC1Q5VXU3 224 aa33.78■■■■□ 3
GPC5-203ENST00000618283 SENP3Q9H4L4 574 aaPredicted RBP30.22■■■□□ 2.43
GPC5-203ENST00000618283 PHF23Q9BUL5 403 aaPredicted RBP29.88■■■□□ 2.37
GPC5-203ENST00000618283 FOXD1Q16676 465 aa28.19■■■□□ 2.1
GPC5-203ENST00000618283 PLPPR3Q6T4P5 718 aa27.02■■□□□ 1.92
GPC5-203ENST00000618283 PPP6R1Q9UPN7 881 aa26.47■■□□□ 1.83
GPC5-203ENST00000618283 ADRA2BP18089 450 aa26.38■■□□□ 1.81
GPC5-203ENST00000618283 PIAS4Q8N2W9 510 aaPredicted RBP26.35■■□□□ 1.81
GPC5-203ENST00000618283 MSH5O43196 834 aa26.3■■□□□ 1.8
GPC5-203ENST00000618283 POTEDQ86YR6 584 aa25.53■■□□□ 1.68
GPC5-203ENST00000618283 MAPK8IP2Q13387 824 aaPredicted RBP24.22■■□□□ 1.47
GPC5-203ENST00000618283 SCAF1Q9H7N4 1312 aaKnown RBP24.09■■□□□ 1.45
GPC5-203ENST00000618283 DMRT2Q9Y5R5 561 aa23.98■■□□□ 1.43
GPC5-203ENST00000618283 PPP4R3CPQ6ZMV5 832 aa23.72■■□□□ 1.39
GPC5-203ENST00000618283 CNKSR2Q8WXI2 1034 aa23.24■■□□□ 1.31
GPC5-203ENST00000618283 HOXD11P31277 338 aaPredicted RBP23.14■■□□□ 1.29
GPC5-203ENST00000618283 DCAF8L1A6NGE4 600 aa23.03■■□□□ 1.28
GPC5-203ENST00000618283 RNF216Q9NWF9 866 aaPredicted RBP23■■□□□ 1.27
GPC5-203ENST00000618283 NCBP3Q53F19 620 aaKnown RBP22.82■■□□□ 1.24
GPC5-203ENST00000618283 CACNB1Q02641 598 aaPredicted RBP22.54■■□□□ 1.2
GPC5-203ENST00000618283 NPM3O75607 178 aaKnown RBP22.51■■□□□ 1.19
GPC5-203ENST00000618283 RNF39Q9H2S5 420 aa22.47■■□□□ 1.19
GPC5-203ENST00000618283 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
GPC5-203ENST00000618283 KCNA4P22459 653 aa22.19■■□□□ 1.14
GPC5-203ENST00000618283 C1QBPQ07021 282 aaKnown RBP22.14■■□□□ 1.13
GPC5-203ENST00000618283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.07■■□□□ 1.12
GPC5-203ENST00000618283 U3KPZ7 1027 aaPredicted RBP21.61■■□□□ 1.05
GPC5-203ENST00000618283 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
GPC5-203ENST00000618283 SPINK5Q9NQ38 1064 aaPredicted RBP21.3■■□□□ 1
GPC5-203ENST00000618283 CAPN15O75808 1086 aa21.24■□□□□ 0.99
GPC5-203ENST00000618283 DSG3P32926 999 aa21.09■□□□□ 0.97
GPC5-203ENST00000618283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
GPC5-203ENST00000618283 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
GPC5-203ENST00000618283 APLP2Q06481 763 aa20.97■□□□□ 0.95
GPC5-203ENST00000618283 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
GPC5-203ENST00000618283 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
GPC5-203ENST00000618283 SAMD1Q6SPF0 538 aaPredicted RBP20.9■□□□□ 0.94
GPC5-203ENST00000618283 ZNF219Q9P2Y4 722 aaPredicted RBP20.85■□□□□ 0.93
GPC5-203ENST00000618283 MYCNP04198 464 aaPredicted RBP20.79■□□□□ 0.92
GPC5-203ENST00000618283 ABCB7O75027 752 aa20.77■□□□□ 0.92
GPC5-203ENST00000618283 FOXD4L1Q9NU39 408 aa20.64■□□□□ 0.89
GPC5-203ENST00000618283 ZBTB22O15209 634 aa20.41■□□□□ 0.86
GPC5-203ENST00000618283 POLA2Q14181 598 aa20.4■□□□□ 0.86
GPC5-203ENST00000618283 ATF5Q9Y2D1 282 aaPredicted RBP20.36■□□□□ 0.85
GPC5-203ENST00000618283 RBM42Q9BTD8 480 aaKnown RBP20.08■□□□□ 0.81
GPC5-203ENST00000618283 POTEHQ6S545 545 aa20.02■□□□□ 0.8
GPC5-203ENST00000618283 ATXN8OSP0DMR3 200 aa19.98■□□□□ 0.79
GPC5-203ENST00000618283 ZBTB12Q9Y330 459 aaPredicted RBP19.93■□□□□ 0.78
GPC5-203ENST00000618283 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
GPC5-203ENST00000618283 AKT1S1Q96B36 256 aa19.66■□□□□ 0.74
GPC5-203ENST00000618283 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
GPC5-203ENST00000618283 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
GPC5-203ENST00000618283 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
GPC5-203ENST00000618283 FBLN2P98095 1184 aa19.51■□□□□ 0.71
GPC5-203ENST00000618283 REM2Q8IYK8 340 aaPredicted RBP19.5■□□□□ 0.71
GPC5-203ENST00000618283 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
GPC5-203ENST00000618283 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
GPC5-203ENST00000618283 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
GPC5-203ENST00000618283 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
GPC5-203ENST00000618283 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
GPC5-203ENST00000618283 PIP4P2Q8N4L2 257 aa19.2■□□□□ 0.66
GPC5-203ENST00000618283 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
GPC5-203ENST00000618283 SSUH2Q9Y2M2 353 aa19.1■□□□□ 0.65
GPC5-203ENST00000618283 FXR2P51116 673 aaKnown RBP eCLIP19.09■□□□□ 0.65
GPC5-203ENST00000618283 SPDYE1Q8NFV5 336 aaPredicted RBP18.99■□□□□ 0.63
GPC5-203ENST00000618283 CLEC11AQ9Y240 323 aa18.99■□□□□ 0.63
GPC5-203ENST00000618283 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
GPC5-203ENST00000618283 HAX1O00165 279 aa18.83■□□□□ 0.6
GPC5-203ENST00000618283 SP7Q8TDD2 431 aaPredicted RBP18.81■□□□□ 0.6
GPC5-203ENST00000618283 PRKAR2AP13861 404 aaKnown RBP18.79■□□□□ 0.6
GPC5-203ENST00000618283 PRR29P0C7W0 189 aa18.68■□□□□ 0.58
GPC5-203ENST00000618283 EVX2Q03828 476 aa18.63■□□□□ 0.57
GPC5-203ENST00000618283 CHADLQ6NUI6 762 aa18.62■□□□□ 0.57
GPC5-203ENST00000618283 SPDYE4A6NLX3 237 aa18.54■□□□□ 0.56
GPC5-203ENST00000618283 C19orf67A6NJJ6 358 aa18.47■□□□□ 0.55
GPC5-203ENST00000618283 STAG3Q9UJ98 1225 aa18.35■□□□□ 0.53
GPC5-203ENST00000618283 FARP1Q9Y4F1 1045 aaPredicted RBP18.34■□□□□ 0.53
GPC5-203ENST00000618283 CREBZFQ9NS37 354 aa18.24■□□□□ 0.51
GPC5-203ENST00000618283 GABBR2O75899 941 aa18.19■□□□□ 0.5
GPC5-203ENST00000618283 CD44P16070 742 aaKnown RBP18.19■□□□□ 0.5
GPC5-203ENST00000618283 PROM2Q8N271 834 aa18.09■□□□□ 0.49
GPC5-203ENST00000618283 ZRANB1Q9UGI0 708 aa17.96■□□□□ 0.47
GPC5-203ENST00000618283 MNX1P50219 401 aaPredicted RBP17.94■□□□□ 0.46
GPC5-203ENST00000618283 ZNF579Q8NAF0 562 aaKnown RBP17.9■□□□□ 0.46
GPC5-203ENST00000618283 NPM1P06748 294 aaKnown RBP eCLIP17.88■□□□□ 0.45
GPC5-203ENST00000618283 CLCN6P51797 869 aa17.88■□□□□ 0.45
GPC5-203ENST00000618283 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
GPC5-203ENST00000618283 PAK3O75914 559 aaPredicted RBP17.8■□□□□ 0.44
GPC5-203ENST00000618283 FKBP8Q14318 412 aa17.73■□□□□ 0.43
GPC5-203ENST00000618283 PHF12Q96QT6 1004 aa17.73■□□□□ 0.43
GPC5-203ENST00000618283 GALR2O43603 387 aaPredicted RBP17.71■□□□□ 0.43
GPC5-203ENST00000618283 DCBLD2Q96PD2 775 aa17.71■□□□□ 0.43
GPC5-203ENST00000618283 MIER1Q8N108 512 aa17.7■□□□□ 0.42
GPC5-203ENST00000618283 LHX8Q68G74 356 aa17.66■□□□□ 0.42
GPC5-203ENST00000618283 PLEKHG5O94827 1062 aa17.62■□□□□ 0.41
GPC5-203ENST00000618283 TSPYL2Q9H2G4 693 aaPredicted RBP17.6■□□□□ 0.41
GPC5-203ENST00000618283 PLCD3Q8N3E9 789 aa17.55■□□□□ 0.4
GPC5-203ENST00000618283 CCDC61Q9Y6R9 512 aa17.49■□□□□ 0.39
GPC5-203ENST00000618283 MS4A3Q96HJ5 214 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms