RNA–Protein interactions for RNA: ENST00000616994.1

AL513548.3-202, humanhuman

Gene AL513548.3, Length 3,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513548.3-202ENST00000616994 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
AL513548.3-202ENST00000616994 EHMT2Q96KQ7 1210 aa12.87□□□□□ -0.35
AL513548.3-202ENST00000616994 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
AL513548.3-202ENST00000616994 PLPPR3Q6T4P5 718 aa12.74□□□□□ -0.37
AL513548.3-202ENST00000616994 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
AL513548.3-202ENST00000616994 MYT1Q01538 1121 aa12.6□□□□□ -0.39
AL513548.3-202ENST00000616994 RTN4Q9NQC3 1192 aaKnown RBP12.57□□□□□ -0.4
AL513548.3-202ENST00000616994 TTBK1Q5TCY1 1321 aaPredicted RBP12.51□□□□□ -0.41
AL513548.3-202ENST00000616994 APLP2Q06481 763 aa12.5□□□□□ -0.41
AL513548.3-202ENST00000616994 NCBP3Q53F19 620 aaKnown RBP12.43□□□□□ -0.42
AL513548.3-202ENST00000616994 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
AL513548.3-202ENST00000616994 ERICH6Q7L0X2 663 aa12.34□□□□□ -0.43
AL513548.3-202ENST00000616994 CHIC1Q5VXU3 224 aa12.29□□□□□ -0.44
AL513548.3-202ENST00000616994 AEBP2Q6ZN18 517 aaPredicted RBP12.12□□□□□ -0.47
AL513548.3-202ENST00000616994 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
AL513548.3-202ENST00000616994 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
AL513548.3-202ENST00000616994 KCNA4P22459 653 aa11.98□□□□□ -0.49
AL513548.3-202ENST00000616994 ARXQ96QS3 562 aa11.94□□□□□ -0.5
AL513548.3-202ENST00000616994 EIF5BO60841 1220 aaKnown RBP11.84□□□□□ -0.51
AL513548.3-202ENST00000616994 TULP1O00294 542 aaPredicted RBP11.83□□□□□ -0.52
AL513548.3-202ENST00000616994 KLHL34Q8N239 644 aa11.81□□□□□ -0.52
AL513548.3-202ENST00000616994 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
AL513548.3-202ENST00000616994 RANGAP1P46060 587 aaPredicted RBP11.74□□□□□ -0.53
AL513548.3-202ENST00000616994 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
AL513548.3-202ENST00000616994 PLEKHG5O94827 1062 aa11.65□□□□□ -0.55
AL513548.3-202ENST00000616994 HOMEZQ8IX15 550 aa11.59□□□□□ -0.55
AL513548.3-202ENST00000616994 PODXL2Q9NZ53 605 aa11.57□□□□□ -0.56
AL513548.3-202ENST00000616994 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.57
AL513548.3-202ENST00000616994 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
AL513548.3-202ENST00000616994 BCANQ96GW7 911 aa11.35□□□□□ -0.59
AL513548.3-202ENST00000616994 PHF23Q9BUL5 403 aaPredicted RBP11.32□□□□□ -0.6
AL513548.3-202ENST00000616994 GTF3C3Q9Y5Q9 886 aa11.3□□□□□ -0.6
AL513548.3-202ENST00000616994 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
AL513548.3-202ENST00000616994 NISCHQ9Y2I1 1504 aa11.23□□□□□ -0.61
AL513548.3-202ENST00000616994 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
AL513548.3-202ENST00000616994 FAM9AQ8IZU1 332 aaPredicted RBP11.18□□□□□ -0.62
AL513548.3-202ENST00000616994 PLCB2Q00722 1185 aa11.14□□□□□ -0.63
AL513548.3-202ENST00000616994 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
AL513548.3-202ENST00000616994 LOC105371045A0A1W2PR82 267 aa11.09□□□□□ -0.63
AL513548.3-202ENST00000616994 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
AL513548.3-202ENST00000616994 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
AL513548.3-202ENST00000616994 PDIA4P13667 645 aaKnown RBP10.98□□□□□ -0.65
AL513548.3-202ENST00000616994 SLC4A1APQ9BWU0 796 aaKnown RBP10.98□□□□□ -0.65
AL513548.3-202ENST00000616994 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
AL513548.3-202ENST00000616994 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
AL513548.3-202ENST00000616994 UBTFP17480 764 aaKnown RBP10.9□□□□□ -0.66
AL513548.3-202ENST00000616994 HRCP23327 699 aa10.9□□□□□ -0.66
AL513548.3-202ENST00000616994 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
AL513548.3-202ENST00000616994 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
AL513548.3-202ENST00000616994 UBE2Q2Q8WVN8 375 aa10.84□□□□□ -0.67
AL513548.3-202ENST00000616994 DHX37Q8IY37 1157 aaKnown RBP10.81□□□□□ -0.68
AL513548.3-202ENST00000616994 PDE4CQ08493 712 aa10.78□□□□□ -0.68
AL513548.3-202ENST00000616994 SAMD1Q6SPF0 538 aaPredicted RBP10.77□□□□□ -0.69
AL513548.3-202ENST00000616994 KDM2AQ9Y2K7 1162 aa10.77□□□□□ -0.69
AL513548.3-202ENST00000616994 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
AL513548.3-202ENST00000616994 ZBTB22O15209 634 aa10.73□□□□□ -0.69
AL513548.3-202ENST00000616994 FBLN2P98095 1184 aa10.72□□□□□ -0.69
AL513548.3-202ENST00000616994 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
AL513548.3-202ENST00000616994 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
AL513548.3-202ENST00000616994 IGSF3O75054 1194 aa10.64□□□□□ -0.71
AL513548.3-202ENST00000616994 PKNOX2Q96KN3 472 aa10.63□□□□□ -0.71
AL513548.3-202ENST00000616994 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
AL513548.3-202ENST00000616994 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
AL513548.3-202ENST00000616994 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
AL513548.3-202ENST00000616994 ABCC9O60706 1549 aa10.6□□□□□ -0.71
AL513548.3-202ENST00000616994 BCL11BQ9C0K0 894 aaPredicted RBP10.59□□□□□ -0.71
AL513548.3-202ENST00000616994 BRD2P25440 801 aaKnown RBP10.59□□□□□ -0.71
AL513548.3-202ENST00000616994 NEFLP07196 543 aa10.57□□□□□ -0.72
AL513548.3-202ENST00000616994 TAF7LQ5H9L4 462 aa10.56□□□□□ -0.72
AL513548.3-202ENST00000616994 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
AL513548.3-202ENST00000616994 FKBP8Q14318 412 aa10.54□□□□□ -0.72
AL513548.3-202ENST00000616994 CCDC180Q9P1Z9 1646 aa10.47□□□□□ -0.73
AL513548.3-202ENST00000616994 ADRA2BP18089 450 aa10.42□□□□□ -0.74
AL513548.3-202ENST00000616994 ANO8Q9HCE9 1232 aaPredicted RBP10.42□□□□□ -0.74
AL513548.3-202ENST00000616994 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
AL513548.3-202ENST00000616994 CCDC136Q96JN2 1154 aa10.42□□□□□ -0.74
AL513548.3-202ENST00000616994 FGD1P98174 961 aa10.4□□□□□ -0.74
AL513548.3-202ENST00000616994 IRX6P78412 446 aaPredicted RBP10.38□□□□□ -0.75
AL513548.3-202ENST00000616994 POLR3GLQ9BT43 218 aa10.38□□□□□ -0.75
AL513548.3-202ENST00000616994 HSP90B1P14625 803 aaKnown RBP10.35□□□□□ -0.75
AL513548.3-202ENST00000616994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.35□□□□□ -0.75
AL513548.3-202ENST00000616994 ARID3AQ99856 593 aa10.32□□□□□ -0.76
AL513548.3-202ENST00000616994 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
AL513548.3-202ENST00000616994 PAXIP1Q6ZW49 1069 aaPredicted RBP10.28□□□□□ -0.76
AL513548.3-202ENST00000616994 DNAJC5BQ9UF47 199 aa10.28□□□□□ -0.76
AL513548.3-202ENST00000616994 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
AL513548.3-202ENST00000616994 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
AL513548.3-202ENST00000616994 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
AL513548.3-202ENST00000616994 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
AL513548.3-202ENST00000616994 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
AL513548.3-202ENST00000616994 SCAF1Q9H7N4 1312 aaKnown RBP10.22□□□□□ -0.77
AL513548.3-202ENST00000616994 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.78
AL513548.3-202ENST00000616994 HMGB1P09429 215 aaKnown RBP10.2□□□□□ -0.78
AL513548.3-202ENST00000616994 PUS7Q96PZ0 661 aaKnown RBP10.19□□□□□ -0.78
AL513548.3-202ENST00000616994 ZNF428Q96B54 188 aa10.18□□□□□ -0.78
AL513548.3-202ENST00000616994 RSPH4AQ5TD94 716 aa10.18□□□□□ -0.78
AL513548.3-202ENST00000616994 BRPF3Q9ULD4 1205 aa10.18□□□□□ -0.78
AL513548.3-202ENST00000616994 NBR1Q14596 966 aa10.16□□□□□ -0.78
AL513548.3-202ENST00000616994 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
AL513548.3-202ENST00000616994 BCCIPQ9P287 314 aaKnown RBP eCLIP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms