RNA–Protein interactions for RNA: ENST00000616396.1

AL390964.1-202, humanhuman

TSL 3

Gene AL390964.1, Length 472 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390964.1-202ENST00000616396 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
AL390964.1-202ENST00000616396 CHIC1Q5VXU3 224 aa16.11■□□□□ 0.17
AL390964.1-202ENST00000616396 SENP3Q9H4L4 574 aaPredicted RBP14.74□□□□□ -0.05
AL390964.1-202ENST00000616396 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
AL390964.1-202ENST00000616396 FOXD1Q16676 465 aa13.77□□□□□ -0.21
AL390964.1-202ENST00000616396 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
AL390964.1-202ENST00000616396 MSH5O43196 834 aa12.98□□□□□ -0.33
AL390964.1-202ENST00000616396 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
AL390964.1-202ENST00000616396 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
AL390964.1-202ENST00000616396 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
AL390964.1-202ENST00000616396 ADRA2BP18089 450 aa12.63□□□□□ -0.39
AL390964.1-202ENST00000616396 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
AL390964.1-202ENST00000616396 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
AL390964.1-202ENST00000616396 SCAF1Q9H7N4 1312 aaKnown RBP11.54□□□□□ -0.56
AL390964.1-202ENST00000616396 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
AL390964.1-202ENST00000616396 DCAF8L1A6NGE4 600 aa11.18□□□□□ -0.62
AL390964.1-202ENST00000616396 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
AL390964.1-202ENST00000616396 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
AL390964.1-202ENST00000616396 RNF39Q9H2S5 420 aa11.06□□□□□ -0.64
AL390964.1-202ENST00000616396 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
AL390964.1-202ENST00000616396 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
AL390964.1-202ENST00000616396 C1QBPQ07021 282 aaKnown RBP10.88□□□□□ -0.67
AL390964.1-202ENST00000616396 DNAJC5BQ9UF47 199 aa10.79□□□□□ -0.68
AL390964.1-202ENST00000616396 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
AL390964.1-202ENST00000616396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
AL390964.1-202ENST00000616396 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
AL390964.1-202ENST00000616396 POTEHQ6S545 545 aa10.38□□□□□ -0.75
AL390964.1-202ENST00000616396 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
AL390964.1-202ENST00000616396 DSG3P32926 999 aa10.27□□□□□ -0.77
AL390964.1-202ENST00000616396 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.77
AL390964.1-202ENST00000616396 CAPN15O75808 1086 aa10.26□□□□□ -0.77
AL390964.1-202ENST00000616396 SLC4A2P04920 1241 aa10.08□□□□□ -0.8
AL390964.1-202ENST00000616396 KCNA4P22459 653 aa10.05□□□□□ -0.8
AL390964.1-202ENST00000616396 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
AL390964.1-202ENST00000616396 APLP2Q06481 763 aa10.01□□□□□ -0.81
AL390964.1-202ENST00000616396 ABCB7O75027 752 aa10□□□□□ -0.81
AL390964.1-202ENST00000616396 ZNF219Q9P2Y4 722 aaPredicted RBP9.99□□□□□ -0.81
AL390964.1-202ENST00000616396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.95□□□□□ -0.82
AL390964.1-202ENST00000616396 HNRNPUL2Q1KMD3 747 aaKnown RBP9.95□□□□□ -0.82
AL390964.1-202ENST00000616396 SAMD1Q6SPF0 538 aaPredicted RBP9.88□□□□□ -0.83
AL390964.1-202ENST00000616396 RBM42Q9BTD8 480 aaKnown RBP9.79□□□□□ -0.84
AL390964.1-202ENST00000616396 POLA2Q14181 598 aa9.71□□□□□ -0.86
AL390964.1-202ENST00000616396 MYCNP04198 464 aaPredicted RBP9.69□□□□□ -0.86
AL390964.1-202ENST00000616396 CHRDL2Q6WN34 429 aa9.69□□□□□ -0.86
AL390964.1-202ENST00000616396 AKT1S1Q96B36 256 aa9.52□□□□□ -0.89
AL390964.1-202ENST00000616396 ATF5Q9Y2D1 282 aaPredicted RBP9.5□□□□□ -0.89
AL390964.1-202ENST00000616396 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
AL390964.1-202ENST00000616396 SP7Q8TDD2 431 aaPredicted RBP9.47□□□□□ -0.89
AL390964.1-202ENST00000616396 FOXD4L1Q9NU39 408 aa9.45□□□□□ -0.9
AL390964.1-202ENST00000616396 REM2Q8IYK8 340 aaPredicted RBP9.44□□□□□ -0.9
AL390964.1-202ENST00000616396 SLC4A1APQ9BWU0 796 aaKnown RBP9.43□□□□□ -0.9
AL390964.1-202ENST00000616396 OSCARQ8IYS5 282 aa9.41□□□□□ -0.9
AL390964.1-202ENST00000616396 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
AL390964.1-202ENST00000616396 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
AL390964.1-202ENST00000616396 HAX1O00165 279 aa9.31□□□□□ -0.92
AL390964.1-202ENST00000616396 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
AL390964.1-202ENST00000616396 ZBTB22O15209 634 aa9.24□□□□□ -0.93
AL390964.1-202ENST00000616396 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
AL390964.1-202ENST00000616396 EVX2Q03828 476 aa9.19□□□□□ -0.94
AL390964.1-202ENST00000616396 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
AL390964.1-202ENST00000616396 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
AL390964.1-202ENST00000616396 SPDYE2Q495Y8 402 aa9.17□□□□□ -0.94
AL390964.1-202ENST00000616396 FBLN2P98095 1184 aa9.14□□□□□ -0.95
AL390964.1-202ENST00000616396 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
AL390964.1-202ENST00000616396 SPDYE1Q8NFV5 336 aaPredicted RBP9.08□□□□□ -0.96
AL390964.1-202ENST00000616396 CLEC11AQ9Y240 323 aa9.07□□□□□ -0.96
AL390964.1-202ENST00000616396 MKRN4PQ13434 485 aaPredicted RBP9.05□□□□□ -0.96
AL390964.1-202ENST00000616396 C19orf67A6NJJ6 358 aa9.02□□□□□ -0.97
AL390964.1-202ENST00000616396 ZNF692Q9BU19 519 aaPredicted RBP9.02□□□□□ -0.97
AL390964.1-202ENST00000616396 SSUH2Q9Y2M2 353 aa9.02□□□□□ -0.97
AL390964.1-202ENST00000616396 GABBR2O75899 941 aa8.96□□□□□ -0.98
AL390964.1-202ENST00000616396 CHADLQ6NUI6 762 aa8.93□□□□□ -0.98
AL390964.1-202ENST00000616396 PLSCR2Q9NRY7 297 aa8.92□□□□□ -0.98
AL390964.1-202ENST00000616396 PRR29P0C7W0 189 aa8.89□□□□□ -0.99
AL390964.1-202ENST00000616396 LHX8Q68G74 356 aa8.88□□□□□ -0.99
AL390964.1-202ENST00000616396 PABPN1Q86U42 306 aaKnown RBP eCLIP8.88□□□□□ -0.99
AL390964.1-202ENST00000616396 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
AL390964.1-202ENST00000616396 FARP1Q9Y4F1 1045 aaPredicted RBP8.78□□□□□ -1
AL390964.1-202ENST00000616396 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
AL390964.1-202ENST00000616396 CLCN6P51797 869 aa8.72□□□□□ -1.01
AL390964.1-202ENST00000616396 DCBLD2Q96PD2 775 aa8.65□□□□□ -1.02
AL390964.1-202ENST00000616396 ZNF579Q8NAF0 562 aaKnown RBP8.64□□□□□ -1.03
AL390964.1-202ENST00000616396 ZRANB1Q9UGI0 708 aa8.62□□□□□ -1.03
AL390964.1-202ENST00000616396 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
AL390964.1-202ENST00000616396 CSRNP3Q8WYN3 585 aa8.58□□□□□ -1.04
AL390964.1-202ENST00000616396 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
AL390964.1-202ENST00000616396 GALR2O43603 387 aaPredicted RBP8.55□□□□□ -1.04
AL390964.1-202ENST00000616396 OTUD5Q96G74 571 aa8.5□□□□□ -1.05
AL390964.1-202ENST00000616396 SPDYE4A6NLX3 237 aa8.48□□□□□ -1.05
AL390964.1-202ENST00000616396 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
AL390964.1-202ENST00000616396 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
AL390964.1-202ENST00000616396 PHF12Q96QT6 1004 aa8.48□□□□□ -1.05
AL390964.1-202ENST00000616396 NPM1P06748 294 aaKnown RBP eCLIP8.44□□□□□ -1.06
AL390964.1-202ENST00000616396 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
AL390964.1-202ENST00000616396 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
AL390964.1-202ENST00000616396 POTEMA6NI47 508 aa8.37□□□□□ -1.07
AL390964.1-202ENST00000616396 ASTLQ6HA08 431 aaPredicted RBP8.36□□□□□ -1.07
AL390964.1-202ENST00000616396 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
AL390964.1-202ENST00000616396 ATMINO43313 823 aaPredicted RBP8.34□□□□□ -1.07
AL390964.1-202ENST00000616396 POTEGQ6S5H5 508 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms