RNA–Protein interactions for RNA: ENST00000616373.1

LINC00943-208, long intergenic non-protein coding RNA 943, humanhuman

TSL 2

Gene LINC00943, Length 420 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-208ENST00000616373 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.49
LINC00943-208ENST00000616373 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
LINC00943-208ENST00000616373 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
LINC00943-208ENST00000616373 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
LINC00943-208ENST00000616373 FOXD1Q16676 465 aa19.34■□□□□ 0.69
LINC00943-208ENST00000616373 PLPPR3Q6T4P5 718 aa18.9■□□□□ 0.62
LINC00943-208ENST00000616373 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
LINC00943-208ENST00000616373 ADRA2BP18089 450 aa18.22■□□□□ 0.51
LINC00943-208ENST00000616373 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
LINC00943-208ENST00000616373 MSH5O43196 834 aa18.08■□□□□ 0.48
LINC00943-208ENST00000616373 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
LINC00943-208ENST00000616373 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
LINC00943-208ENST00000616373 MAPK8IP2Q13387 824 aaPredicted RBP16.63■□□□□ 0.25
LINC00943-208ENST00000616373 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
LINC00943-208ENST00000616373 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LINC00943-208ENST00000616373 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
LINC00943-208ENST00000616373 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
LINC00943-208ENST00000616373 HOXD11P31277 338 aaPredicted RBP16.05■□□□□ 0.16
LINC00943-208ENST00000616373 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
LINC00943-208ENST00000616373 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
LINC00943-208ENST00000616373 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
LINC00943-208ENST00000616373 KCNA4P22459 653 aa15.67■□□□□ 0.1
LINC00943-208ENST00000616373 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
LINC00943-208ENST00000616373 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
LINC00943-208ENST00000616373 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
LINC00943-208ENST00000616373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.3■□□□□ 0.04
LINC00943-208ENST00000616373 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
LINC00943-208ENST00000616373 U3KPZ7 1027 aaPredicted RBP14.98□□□□□ -0.01
LINC00943-208ENST00000616373 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
LINC00943-208ENST00000616373 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
LINC00943-208ENST00000616373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
LINC00943-208ENST00000616373 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
LINC00943-208ENST00000616373 APLP2Q06481 763 aa14.7□□□□□ -0.06
LINC00943-208ENST00000616373 CAPN15O75808 1086 aa14.67□□□□□ -0.06
LINC00943-208ENST00000616373 SPINK5Q9NQ38 1064 aaPredicted RBP14.66□□□□□ -0.06
LINC00943-208ENST00000616373 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
LINC00943-208ENST00000616373 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
LINC00943-208ENST00000616373 FOXD4L1Q9NU39 408 aa14.59□□□□□ -0.07
LINC00943-208ENST00000616373 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
LINC00943-208ENST00000616373 DSG3P32926 999 aa14.51□□□□□ -0.09
LINC00943-208ENST00000616373 TRHP20396 242 aaPredicted RBP14.48□□□□□ -0.09
LINC00943-208ENST00000616373 ZBTB22O15209 634 aa14.39□□□□□ -0.11
LINC00943-208ENST00000616373 ABCB7O75027 752 aa14.32□□□□□ -0.12
LINC00943-208ENST00000616373 ATF5Q9Y2D1 282 aaPredicted RBP14.17□□□□□ -0.14
LINC00943-208ENST00000616373 ATXN8OSP0DMR3 200 aa14.15□□□□□ -0.14
LINC00943-208ENST00000616373 POLA2Q14181 598 aa14.15□□□□□ -0.14
LINC00943-208ENST00000616373 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
LINC00943-208ENST00000616373 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
LINC00943-208ENST00000616373 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
LINC00943-208ENST00000616373 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
LINC00943-208ENST00000616373 FBLN2P98095 1184 aa13.71□□□□□ -0.21
LINC00943-208ENST00000616373 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
LINC00943-208ENST00000616373 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
LINC00943-208ENST00000616373 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
LINC00943-208ENST00000616373 SPDYE2BA6NHP3 402 aa13.53□□□□□ -0.24
LINC00943-208ENST00000616373 SPDYE6P0CI01 402 aa13.53□□□□□ -0.24
LINC00943-208ENST00000616373 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
LINC00943-208ENST00000616373 POTEHQ6S545 545 aa13.51□□□□□ -0.25
LINC00943-208ENST00000616373 CHRDL2Q6WN34 429 aa13.46□□□□□ -0.25
LINC00943-208ENST00000616373 REM2Q8IYK8 340 aaPredicted RBP13.45□□□□□ -0.26
LINC00943-208ENST00000616373 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
LINC00943-208ENST00000616373 SSUH2Q9Y2M2 353 aa13.35□□□□□ -0.27
LINC00943-208ENST00000616373 PITPNM1O00562 1244 aa13.3□□□□□ -0.28
LINC00943-208ENST00000616373 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
LINC00943-208ENST00000616373 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00943-208ENST00000616373 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
LINC00943-208ENST00000616373 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
LINC00943-208ENST00000616373 FXR2P51116 673 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00943-208ENST00000616373 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
LINC00943-208ENST00000616373 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
LINC00943-208ENST00000616373 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
LINC00943-208ENST00000616373 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
LINC00943-208ENST00000616373 HAX1O00165 279 aa12.88□□□□□ -0.35
LINC00943-208ENST00000616373 CHADLQ6NUI6 762 aa12.84□□□□□ -0.35
LINC00943-208ENST00000616373 PROM2Q8N271 834 aa12.81□□□□□ -0.36
LINC00943-208ENST00000616373 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
LINC00943-208ENST00000616373 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
LINC00943-208ENST00000616373 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
LINC00943-208ENST00000616373 CREBZFQ9NS37 354 aa12.69□□□□□ -0.38
LINC00943-208ENST00000616373 FKBP8Q14318 412 aa12.68□□□□□ -0.38
LINC00943-208ENST00000616373 EVX2Q03828 476 aa12.67□□□□□ -0.38
LINC00943-208ENST00000616373 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
LINC00943-208ENST00000616373 NPM1P06748 294 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00943-208ENST00000616373 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
LINC00943-208ENST00000616373 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
LINC00943-208ENST00000616373 MIER1Q8N108 512 aa12.46□□□□□ -0.41
LINC00943-208ENST00000616373 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
LINC00943-208ENST00000616373 GABBR2O75899 941 aa12.44□□□□□ -0.42
LINC00943-208ENST00000616373 CLCN6P51797 869 aa12.44□□□□□ -0.42
LINC00943-208ENST00000616373 ZRANB1Q9UGI0 708 aa12.43□□□□□ -0.42
LINC00943-208ENST00000616373 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
LINC00943-208ENST00000616373 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
LINC00943-208ENST00000616373 FBXO3Q9UK99 471 aa12.41□□□□□ -0.42
LINC00943-208ENST00000616373 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
LINC00943-208ENST00000616373 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
LINC00943-208ENST00000616373 TSPYL2Q9H2G4 693 aaPredicted RBP12.26□□□□□ -0.45
LINC00943-208ENST00000616373 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
LINC00943-208ENST00000616373 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
LINC00943-208ENST00000616373 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
LINC00943-208ENST00000616373 GALR2O43603 387 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms