RNA–Protein interactions for RNA: ENST00000616268.4

AC004160.1-213, humanhuman

TSL 5

Gene AC004160.1, Length 242 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004160.1-213ENST00000616268 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
AC004160.1-213ENST00000616268 CHIC1Q5VXU3 224 aa29.1■■■□□ 2.25
AC004160.1-213ENST00000616268 SENP3Q9H4L4 574 aaPredicted RBP26.31■■□□□ 1.8
AC004160.1-213ENST00000616268 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
AC004160.1-213ENST00000616268 FOXD1Q16676 465 aa24.45■■□□□ 1.5
AC004160.1-213ENST00000616268 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
AC004160.1-213ENST00000616268 MSH5O43196 834 aa23.03■■□□□ 1.28
AC004160.1-213ENST00000616268 PIAS4Q8N2W9 510 aaPredicted RBP22.83■■□□□ 1.25
AC004160.1-213ENST00000616268 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
AC004160.1-213ENST00000616268 ADRA2BP18089 450 aa22.65■■□□□ 1.22
AC004160.1-213ENST00000616268 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
AC004160.1-213ENST00000616268 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
AC004160.1-213ENST00000616268 MAPK8IP2Q13387 824 aaPredicted RBP20.82■□□□□ 0.92
AC004160.1-213ENST00000616268 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
AC004160.1-213ENST00000616268 PPP4R3CPQ6ZMV5 832 aa20.3■□□□□ 0.84
AC004160.1-213ENST00000616268 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
AC004160.1-213ENST00000616268 CNKSR2Q8WXI2 1034 aa20■□□□□ 0.79
AC004160.1-213ENST00000616268 DCAF8L1A6NGE4 600 aa19.89■□□□□ 0.77
AC004160.1-213ENST00000616268 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
AC004160.1-213ENST00000616268 CACNB1Q02641 598 aaPredicted RBP19.76■□□□□ 0.75
AC004160.1-213ENST00000616268 RNF39Q9H2S5 420 aa19.6■□□□□ 0.73
AC004160.1-213ENST00000616268 NCBP3Q53F19 620 aaKnown RBP19.58■□□□□ 0.72
AC004160.1-213ENST00000616268 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
AC004160.1-213ENST00000616268 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
AC004160.1-213ENST00000616268 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
AC004160.1-213ENST00000616268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.05■□□□□ 0.64
AC004160.1-213ENST00000616268 KCNA4P22459 653 aa18.69■□□□□ 0.58
AC004160.1-213ENST00000616268 U3KPZ7 1027 aaPredicted RBP18.6■□□□□ 0.57
AC004160.1-213ENST00000616268 CAPN15O75808 1086 aa18.35■□□□□ 0.53
AC004160.1-213ENST00000616268 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
AC004160.1-213ENST00000616268 SPINK5Q9NQ38 1064 aaPredicted RBP18.33■□□□□ 0.52
AC004160.1-213ENST00000616268 DSG3P32926 999 aa18.29■□□□□ 0.52
AC004160.1-213ENST00000616268 APLP2Q06481 763 aa18.23■□□□□ 0.51
AC004160.1-213ENST00000616268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
AC004160.1-213ENST00000616268 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
AC004160.1-213ENST00000616268 ZNF219Q9P2Y4 722 aaPredicted RBP18.07■□□□□ 0.48
AC004160.1-213ENST00000616268 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
AC004160.1-213ENST00000616268 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
AC004160.1-213ENST00000616268 ABCB7O75027 752 aa17.85■□□□□ 0.45
AC004160.1-213ENST00000616268 MYCNP04198 464 aaPredicted RBP17.81■□□□□ 0.44
AC004160.1-213ENST00000616268 POTEHQ6S545 545 aa17.69■□□□□ 0.42
AC004160.1-213ENST00000616268 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
AC004160.1-213ENST00000616268 POLA2Q14181 598 aa17.54■□□□□ 0.4
AC004160.1-213ENST00000616268 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
AC004160.1-213ENST00000616268 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
AC004160.1-213ENST00000616268 ATF5Q9Y2D1 282 aaPredicted RBP17.28■□□□□ 0.36
AC004160.1-213ENST00000616268 ZBTB12Q9Y330 459 aaPredicted RBP17.28■□□□□ 0.36
AC004160.1-213ENST00000616268 ZBTB22O15209 634 aa17.14■□□□□ 0.33
AC004160.1-213ENST00000616268 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
AC004160.1-213ENST00000616268 ATXN8OSP0DMR3 200 aa17.1■□□□□ 0.33
AC004160.1-213ENST00000616268 AKT1S1Q96B36 256 aa17.09■□□□□ 0.33
AC004160.1-213ENST00000616268 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
AC004160.1-213ENST00000616268 REM2Q8IYK8 340 aaPredicted RBP16.88■□□□□ 0.29
AC004160.1-213ENST00000616268 FBLN2P98095 1184 aa16.75■□□□□ 0.27
AC004160.1-213ENST00000616268 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
AC004160.1-213ENST00000616268 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
AC004160.1-213ENST00000616268 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
AC004160.1-213ENST00000616268 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
AC004160.1-213ENST00000616268 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
AC004160.1-213ENST00000616268 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
AC004160.1-213ENST00000616268 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
AC004160.1-213ENST00000616268 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
AC004160.1-213ENST00000616268 SPDYE1Q8NFV5 336 aaPredicted RBP16.43■□□□□ 0.22
AC004160.1-213ENST00000616268 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
AC004160.1-213ENST00000616268 SSUH2Q9Y2M2 353 aa16.42■□□□□ 0.22
AC004160.1-213ENST00000616268 HAX1O00165 279 aa16.41■□□□□ 0.22
AC004160.1-213ENST00000616268 CLEC11AQ9Y240 323 aa16.32■□□□□ 0.2
AC004160.1-213ENST00000616268 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
AC004160.1-213ENST00000616268 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
AC004160.1-213ENST00000616268 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
AC004160.1-213ENST00000616268 EVX2Q03828 476 aa16.13■□□□□ 0.17
AC004160.1-213ENST00000616268 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
AC004160.1-213ENST00000616268 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
AC004160.1-213ENST00000616268 CHADLQ6NUI6 762 aa15.97■□□□□ 0.15
AC004160.1-213ENST00000616268 EHMT2Q96KQ7 1210 aa15.95■□□□□ 0.14
AC004160.1-213ENST00000616268 GABBR2O75899 941 aa15.83■□□□□ 0.12
AC004160.1-213ENST00000616268 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
AC004160.1-213ENST00000616268 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
AC004160.1-213ENST00000616268 SPDYE4A6NLX3 237 aa15.73■□□□□ 0.11
AC004160.1-213ENST00000616268 CLCN6P51797 869 aa15.73■□□□□ 0.11
AC004160.1-213ENST00000616268 CD44P16070 742 aaKnown RBP15.72■□□□□ 0.11
AC004160.1-213ENST00000616268 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
AC004160.1-213ENST00000616268 ZNF579Q8NAF0 562 aaKnown RBP15.52■□□□□ 0.08
AC004160.1-213ENST00000616268 LHX8Q68G74 356 aa15.5■□□□□ 0.07
AC004160.1-213ENST00000616268 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
AC004160.1-213ENST00000616268 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
AC004160.1-213ENST00000616268 NPM1P06748 294 aaKnown RBP eCLIP15.42■□□□□ 0.06
AC004160.1-213ENST00000616268 DCBLD2Q96PD2 775 aa15.41■□□□□ 0.06
AC004160.1-213ENST00000616268 PAK3O75914 559 aaPredicted RBP15.4■□□□□ 0.06
AC004160.1-213ENST00000616268 PROM2Q8N271 834 aa15.37■□□□□ 0.05
AC004160.1-213ENST00000616268 MNX1P50219 401 aaPredicted RBP15.35■□□□□ 0.05
AC004160.1-213ENST00000616268 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.04
AC004160.1-213ENST00000616268 PHF12Q96QT6 1004 aa15.21■□□□□ 0.03
AC004160.1-213ENST00000616268 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
AC004160.1-213ENST00000616268 MIER1Q8N108 512 aa15.04■□□□□ -0
AC004160.1-213ENST00000616268 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
AC004160.1-213ENST00000616268 MS4A3Q96HJ5 214 aa15.02■□□□□ -0
AC004160.1-213ENST00000616268 ASTLQ6HA08 431 aaPredicted RBP15.01□□□□□ -0.01
AC004160.1-213ENST00000616268 CCDC61Q9Y6R9 512 aa15.01□□□□□ -0.01
AC004160.1-213ENST00000616268 PELP1Q8IZL8 1130 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms