RNA–Protein interactions for RNA: ENST00000613729.1

RBBP6-213, Transcript of RB binding protein 6, ubiquitin ligase, humanhuman

Gene RBBP6, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP6-213ENST00000613729 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
RBBP6-213ENST00000613729 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.95
RBBP6-213ENST00000613729 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
RBBP6-213ENST00000613729 PHF23Q9BUL5 403 aaPredicted RBP18.58■□□□□ 0.56
RBBP6-213ENST00000613729 FOXD1Q16676 465 aa17.52■□□□□ 0.4
RBBP6-213ENST00000613729 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
RBBP6-213ENST00000613729 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
RBBP6-213ENST00000613729 ADRA2BP18089 450 aa16.41■□□□□ 0.22
RBBP6-213ENST00000613729 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
RBBP6-213ENST00000613729 MSH5O43196 834 aa16.36■□□□□ 0.21
RBBP6-213ENST00000613729 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
RBBP6-213ENST00000613729 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ 0
RBBP6-213ENST00000613729 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
RBBP6-213ENST00000613729 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
RBBP6-213ENST00000613729 PPP4R3CPQ6ZMV5 832 aa14.78□□□□□ -0.04
RBBP6-213ENST00000613729 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
RBBP6-213ENST00000613729 KCNA4P22459 653 aa14.45□□□□□ -0.1
RBBP6-213ENST00000613729 HOXD11P31277 338 aaPredicted RBP14.39□□□□□ -0.11
RBBP6-213ENST00000613729 DCAF8L1A6NGE4 600 aa14.37□□□□□ -0.11
RBBP6-213ENST00000613729 RNF216Q9NWF9 866 aaPredicted RBP14.31□□□□□ -0.12
RBBP6-213ENST00000613729 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
RBBP6-213ENST00000613729 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
RBBP6-213ENST00000613729 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
RBBP6-213ENST00000613729 RNF39Q9H2S5 420 aa13.96□□□□□ -0.17
RBBP6-213ENST00000613729 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
RBBP6-213ENST00000613729 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
RBBP6-213ENST00000613729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
RBBP6-213ENST00000613729 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
RBBP6-213ENST00000613729 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
RBBP6-213ENST00000613729 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
RBBP6-213ENST00000613729 CSRNP3Q8WYN3 585 aa13.38□□□□□ -0.27
RBBP6-213ENST00000613729 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
RBBP6-213ENST00000613729 ZBTB22O15209 634 aa13.36□□□□□ -0.27
RBBP6-213ENST00000613729 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
RBBP6-213ENST00000613729 CAPN15O75808 1086 aa13.24□□□□□ -0.29
RBBP6-213ENST00000613729 FOXD4L1Q9NU39 408 aa13.17□□□□□ -0.3
RBBP6-213ENST00000613729 DSG3P32926 999 aa13.11□□□□□ -0.31
RBBP6-213ENST00000613729 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
RBBP6-213ENST00000613729 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
RBBP6-213ENST00000613729 APLP2Q06481 763 aa13.07□□□□□ -0.32
RBBP6-213ENST00000613729 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
RBBP6-213ENST00000613729 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
RBBP6-213ENST00000613729 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
RBBP6-213ENST00000613729 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
RBBP6-213ENST00000613729 ABCB7O75027 752 aa12.95□□□□□ -0.34
RBBP6-213ENST00000613729 POLA2Q14181 598 aa12.72□□□□□ -0.37
RBBP6-213ENST00000613729 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
RBBP6-213ENST00000613729 ATXN8OSP0DMR3 200 aa12.64□□□□□ -0.39
RBBP6-213ENST00000613729 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
RBBP6-213ENST00000613729 POTEHQ6S545 545 aa12.43□□□□□ -0.42
RBBP6-213ENST00000613729 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
RBBP6-213ENST00000613729 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
RBBP6-213ENST00000613729 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
RBBP6-213ENST00000613729 CHRDL2Q6WN34 429 aa12.21□□□□□ -0.45
RBBP6-213ENST00000613729 FBLN2P98095 1184 aa12.18□□□□□ -0.46
RBBP6-213ENST00000613729 REM2Q8IYK8 340 aaPredicted RBP12.13□□□□□ -0.47
RBBP6-213ENST00000613729 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
RBBP6-213ENST00000613729 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
RBBP6-213ENST00000613729 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
RBBP6-213ENST00000613729 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
RBBP6-213ENST00000613729 FKBP8Q14318 412 aa12.04□□□□□ -0.48
RBBP6-213ENST00000613729 PITPNM1O00562 1244 aa12□□□□□ -0.49
RBBP6-213ENST00000613729 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.5
RBBP6-213ENST00000613729 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
RBBP6-213ENST00000613729 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.51
RBBP6-213ENST00000613729 FXR2P51116 673 aaKnown RBP eCLIP11.86□□□□□ -0.51
RBBP6-213ENST00000613729 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
RBBP6-213ENST00000613729 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
RBBP6-213ENST00000613729 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
RBBP6-213ENST00000613729 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
RBBP6-213ENST00000613729 HAX1O00165 279 aa11.72□□□□□ -0.53
RBBP6-213ENST00000613729 PRKAR2AP13861 404 aaKnown RBP11.7□□□□□ -0.54
RBBP6-213ENST00000613729 PROM2Q8N271 834 aa11.7□□□□□ -0.54
RBBP6-213ENST00000613729 SP7Q8TDD2 431 aaPredicted RBP11.69□□□□□ -0.54
RBBP6-213ENST00000613729 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
RBBP6-213ENST00000613729 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
RBBP6-213ENST00000613729 EVX2Q03828 476 aa11.56□□□□□ -0.56
RBBP6-213ENST00000613729 C19orf67A6NJJ6 358 aa11.48□□□□□ -0.57
RBBP6-213ENST00000613729 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
RBBP6-213ENST00000613729 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
RBBP6-213ENST00000613729 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
RBBP6-213ENST00000613729 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
RBBP6-213ENST00000613729 RTN4Q9NQC3 1192 aaKnown RBP11.36□□□□□ -0.59
RBBP6-213ENST00000613729 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
RBBP6-213ENST00000613729 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
RBBP6-213ENST00000613729 GABBR2O75899 941 aa11.31□□□□□ -0.6
RBBP6-213ENST00000613729 IFNLR1Q8IU57 520 aaPredicted RBP11.3□□□□□ -0.6
RBBP6-213ENST00000613729 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.6
RBBP6-213ENST00000613729 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
RBBP6-213ENST00000613729 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
RBBP6-213ENST00000613729 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
RBBP6-213ENST00000613729 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBBP6-213ENST00000613729 MIER1Q8N108 512 aa11.15□□□□□ -0.62
RBBP6-213ENST00000613729 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
RBBP6-213ENST00000613729 PAK3O75914 559 aaPredicted RBP11.13□□□□□ -0.63
RBBP6-213ENST00000613729 CLCN6P51797 869 aa11.13□□□□□ -0.63
RBBP6-213ENST00000613729 KLHL34Q8N239 644 aa11.08□□□□□ -0.64
RBBP6-213ENST00000613729 POTEIP0CG38 1075 aa11.05□□□□□ -0.64
RBBP6-213ENST00000613729 DCBLD2Q96PD2 775 aa11.04□□□□□ -0.64
RBBP6-213ENST00000613729 PHF12Q96QT6 1004 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms