RNA–Protein interactions for RNA: ENST00000610112.5

LINC01440-206, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 687 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-206ENST00000610112 AEBP2Q6ZN18 517 aaPredicted RBP34.33■■■■□ 3.09
LINC01440-206ENST00000610112 CHIC1Q5VXU3 224 aa32.7■■■□□ 2.83
LINC01440-206ENST00000610112 SENP3Q9H4L4 574 aaPredicted RBP29.52■■■□□ 2.32
LINC01440-206ENST00000610112 PHF23Q9BUL5 403 aaPredicted RBP29.02■■■□□ 2.24
LINC01440-206ENST00000610112 FOXD1Q16676 465 aa27.36■■□□□ 1.97
LINC01440-206ENST00000610112 PLPPR3Q6T4P5 718 aa26.19■■□□□ 1.78
LINC01440-206ENST00000610112 MSH5O43196 834 aa25.82■■□□□ 1.72
LINC01440-206ENST00000610112 PIAS4Q8N2W9 510 aaPredicted RBP25.63■■□□□ 1.69
LINC01440-206ENST00000610112 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
LINC01440-206ENST00000610112 ADRA2BP18089 450 aa25.42■■□□□ 1.66
LINC01440-206ENST00000610112 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
LINC01440-206ENST00000610112 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
LINC01440-206ENST00000610112 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
LINC01440-206ENST00000610112 MAPK8IP2Q13387 824 aaPredicted RBP23.32■■□□□ 1.32
LINC01440-206ENST00000610112 PPP4R3CPQ6ZMV5 832 aa22.87■■□□□ 1.25
LINC01440-206ENST00000610112 CNKSR2Q8WXI2 1034 aa22.52■■□□□ 1.2
LINC01440-206ENST00000610112 HOXD11P31277 338 aaPredicted RBP22.47■■□□□ 1.19
LINC01440-206ENST00000610112 DCAF8L1A6NGE4 600 aa22.37■■□□□ 1.17
LINC01440-206ENST00000610112 RNF216Q9NWF9 866 aaPredicted RBP22.33■■□□□ 1.17
LINC01440-206ENST00000610112 NCBP3Q53F19 620 aaKnown RBP22.13■■□□□ 1.13
LINC01440-206ENST00000610112 CACNB1Q02641 598 aaPredicted RBP22.1■■□□□ 1.13
LINC01440-206ENST00000610112 RNF39Q9H2S5 420 aa21.92■■□□□ 1.1
LINC01440-206ENST00000610112 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
LINC01440-206ENST00000610112 C1QBPQ07021 282 aaKnown RBP21.69■■□□□ 1.06
LINC01440-206ENST00000610112 NPM3O75607 178 aaKnown RBP21.63■■□□□ 1.05
LINC01440-206ENST00000610112 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.44■■□□□ 1.02
LINC01440-206ENST00000610112 KCNA4P22459 653 aa21.13■□□□□ 0.97
LINC01440-206ENST00000610112 U3KPZ7 1027 aaPredicted RBP20.9■□□□□ 0.94
LINC01440-206ENST00000610112 CAPN15O75808 1086 aa20.64■□□□□ 0.89
LINC01440-206ENST00000610112 SLC4A2P04920 1241 aa20.62■□□□□ 0.89
LINC01440-206ENST00000610112 APLP2Q06481 763 aa20.59■□□□□ 0.89
LINC01440-206ENST00000610112 SPINK5Q9NQ38 1064 aaPredicted RBP20.56■□□□□ 0.88
LINC01440-206ENST00000610112 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
LINC01440-206ENST00000610112 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
LINC01440-206ENST00000610112 DSG3P32926 999 aa20.49■□□□□ 0.87
LINC01440-206ENST00000610112 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
LINC01440-206ENST00000610112 SAMD1Q6SPF0 538 aaPredicted RBP20.35■□□□□ 0.85
LINC01440-206ENST00000610112 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
LINC01440-206ENST00000610112 MYCNP04198 464 aaPredicted RBP20.12■□□□□ 0.81
LINC01440-206ENST00000610112 ABCB7O75027 752 aa20.07■□□□□ 0.8
LINC01440-206ENST00000610112 SLC4A1APQ9BWU0 796 aaKnown RBP20.03■□□□□ 0.8
LINC01440-206ENST00000610112 FOXD4L1Q9NU39 408 aa19.86■□□□□ 0.77
LINC01440-206ENST00000610112 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
LINC01440-206ENST00000610112 POLA2Q14181 598 aa19.71■□□□□ 0.75
LINC01440-206ENST00000610112 POTEHQ6S545 545 aa19.71■□□□□ 0.75
LINC01440-206ENST00000610112 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
LINC01440-206ENST00000610112 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
LINC01440-206ENST00000610112 ZBTB22O15209 634 aa19.36■□□□□ 0.69
LINC01440-206ENST00000610112 ATXN8OSP0DMR3 200 aa19.33■□□□□ 0.68
LINC01440-206ENST00000610112 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
LINC01440-206ENST00000610112 CHRDL2Q6WN34 429 aa19.18■□□□□ 0.66
LINC01440-206ENST00000610112 OSCARQ8IYS5 282 aa19.06■□□□□ 0.64
LINC01440-206ENST00000610112 FBLN2P98095 1184 aa18.94■□□□□ 0.62
LINC01440-206ENST00000610112 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
LINC01440-206ENST00000610112 SPDYE2BA6NHP3 402 aa18.82■□□□□ 0.6
LINC01440-206ENST00000610112 SPDYE6P0CI01 402 aa18.82■□□□□ 0.6
LINC01440-206ENST00000610112 SPDYE2Q495Y8 402 aa18.82■□□□□ 0.6
LINC01440-206ENST00000610112 PITPNM1O00562 1244 aa18.71■□□□□ 0.59
LINC01440-206ENST00000610112 PIP4P2Q8N4L2 257 aa18.67■□□□□ 0.58
LINC01440-206ENST00000610112 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC01440-206ENST00000610112 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
LINC01440-206ENST00000610112 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
LINC01440-206ENST00000610112 SPDYE1Q8NFV5 336 aaPredicted RBP18.5■□□□□ 0.55
LINC01440-206ENST00000610112 SSUH2Q9Y2M2 353 aa18.49■□□□□ 0.55
LINC01440-206ENST00000610112 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
LINC01440-206ENST00000610112 CSRNP3Q8WYN3 585 aa18.48■□□□□ 0.55
LINC01440-206ENST00000610112 HAX1O00165 279 aa18.39■□□□□ 0.53
LINC01440-206ENST00000610112 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
LINC01440-206ENST00000610112 PRKAR2AP13861 404 aaKnown RBP18.25■□□□□ 0.51
LINC01440-206ENST00000610112 EHMT2Q96KQ7 1210 aa18.22■□□□□ 0.51
LINC01440-206ENST00000610112 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
LINC01440-206ENST00000610112 PRR29P0C7W0 189 aa18.12■□□□□ 0.49
LINC01440-206ENST00000610112 C19orf67A6NJJ6 358 aa17.99■□□□□ 0.47
LINC01440-206ENST00000610112 EVX2Q03828 476 aa17.98■□□□□ 0.47
LINC01440-206ENST00000610112 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
LINC01440-206ENST00000610112 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
LINC01440-206ENST00000610112 SPDYE4A6NLX3 237 aa17.8■□□□□ 0.44
LINC01440-206ENST00000610112 FARP1Q9Y4F1 1045 aaPredicted RBP17.78■□□□□ 0.44
LINC01440-206ENST00000610112 GABBR2O75899 941 aa17.71■□□□□ 0.43
LINC01440-206ENST00000610112 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
LINC01440-206ENST00000610112 CLCN6P51797 869 aa17.67■□□□□ 0.42
LINC01440-206ENST00000610112 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
LINC01440-206ENST00000610112 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
LINC01440-206ENST00000610112 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
LINC01440-206ENST00000610112 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
LINC01440-206ENST00000610112 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
LINC01440-206ENST00000610112 PROM2Q8N271 834 aa17.35■□□□□ 0.37
LINC01440-206ENST00000610112 LHX8Q68G74 356 aa17.32■□□□□ 0.36
LINC01440-206ENST00000610112 DCBLD2Q96PD2 775 aa17.32■□□□□ 0.36
LINC01440-206ENST00000610112 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
LINC01440-206ENST00000610112 MNX1P50219 401 aaPredicted RBP17.25■□□□□ 0.35
LINC01440-206ENST00000610112 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
LINC01440-206ENST00000610112 GALR2O43603 387 aaPredicted RBP17.13■□□□□ 0.33
LINC01440-206ENST00000610112 PHF12Q96QT6 1004 aa17.1■□□□□ 0.33
LINC01440-206ENST00000610112 MIER1Q8N108 512 aa17■□□□□ 0.31
LINC01440-206ENST00000610112 TSPYL2Q9H2G4 693 aaPredicted RBP16.95■□□□□ 0.3
LINC01440-206ENST00000610112 MS4A3Q96HJ5 214 aa16.91■□□□□ 0.3
LINC01440-206ENST00000610112 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
LINC01440-206ENST00000610112 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
LINC01440-206ENST00000610112 CCDC61Q9Y6R9 512 aa16.89■□□□□ 0.29
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