RNA–Protein interactions for RNA: ENST00000609972.1

RGPD4-AS1-206, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 5

Gene RGPD4-AS1, Length 393 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-206ENST00000609972 AEBP2Q6ZN18 517 aaPredicted RBP32.71■■■□□ 2.83
RGPD4-AS1-206ENST00000609972 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
RGPD4-AS1-206ENST00000609972 PHF23Q9BUL5 403 aaPredicted RBP28.27■■■□□ 2.12
RGPD4-AS1-206ENST00000609972 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
RGPD4-AS1-206ENST00000609972 PLPPR3Q6T4P5 718 aa26.22■■□□□ 1.79
RGPD4-AS1-206ENST00000609972 FOXD1Q16676 465 aa25.74■■□□□ 1.71
RGPD4-AS1-206ENST00000609972 ADRA2BP18089 450 aa24.88■■□□□ 1.57
RGPD4-AS1-206ENST00000609972 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
RGPD4-AS1-206ENST00000609972 PIAS4Q8N2W9 510 aaPredicted RBP24.33■■□□□ 1.49
RGPD4-AS1-206ENST00000609972 MSH5O43196 834 aa23.74■■□□□ 1.39
RGPD4-AS1-206ENST00000609972 PPP4R3CPQ6ZMV5 832 aa23.11■■□□□ 1.29
RGPD4-AS1-206ENST00000609972 SCAF1Q9H7N4 1312 aaKnown RBP22.88■■□□□ 1.25
RGPD4-AS1-206ENST00000609972 KCNA4P22459 653 aa22.72■■□□□ 1.23
RGPD4-AS1-206ENST00000609972 NCBP3Q53F19 620 aaKnown RBP22.62■■□□□ 1.21
RGPD4-AS1-206ENST00000609972 MAPK8IP2Q13387 824 aaPredicted RBP22.52■■□□□ 1.2
RGPD4-AS1-206ENST00000609972 CNKSR2Q8WXI2 1034 aa22.45■■□□□ 1.18
RGPD4-AS1-206ENST00000609972 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
RGPD4-AS1-206ENST00000609972 NPM3O75607 178 aaKnown RBP22.2■■□□□ 1.14
RGPD4-AS1-206ENST00000609972 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
RGPD4-AS1-206ENST00000609972 HOXD11P31277 338 aaPredicted RBP21.83■■□□□ 1.09
RGPD4-AS1-206ENST00000609972 SLC4A1APQ9BWU0 796 aaKnown RBP21.71■■□□□ 1.07
RGPD4-AS1-206ENST00000609972 DNAJC5BQ9UF47 199 aa21.6■■□□□ 1.05
RGPD4-AS1-206ENST00000609972 POTEDQ86YR6 584 aa21.26■□□□□ 0.99
RGPD4-AS1-206ENST00000609972 DCAF8L1A6NGE4 600 aa21.24■□□□□ 0.99
RGPD4-AS1-206ENST00000609972 EHMT2Q96KQ7 1210 aa21.23■□□□□ 0.99
RGPD4-AS1-206ENST00000609972 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
RGPD4-AS1-206ENST00000609972 SLC4A2P04920 1241 aa20.91■□□□□ 0.94
RGPD4-AS1-206ENST00000609972 FOXD4L1Q9NU39 408 aa20.9■□□□□ 0.94
RGPD4-AS1-206ENST00000609972 ZBTB22O15209 634 aa20.87■□□□□ 0.93
RGPD4-AS1-206ENST00000609972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.82■□□□□ 0.92
RGPD4-AS1-206ENST00000609972 MYCNP04198 464 aaPredicted RBP20.55■□□□□ 0.88
RGPD4-AS1-206ENST00000609972 U3KPZ7 1027 aaPredicted RBP20.44■□□□□ 0.86
RGPD4-AS1-206ENST00000609972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
RGPD4-AS1-206ENST00000609972 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
RGPD4-AS1-206ENST00000609972 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
RGPD4-AS1-206ENST00000609972 SAMD1Q6SPF0 538 aaPredicted RBP20.25■□□□□ 0.83
RGPD4-AS1-206ENST00000609972 ATXN8OSP0DMR3 200 aa20.22■□□□□ 0.83
RGPD4-AS1-206ENST00000609972 C1QBPQ07021 282 aaKnown RBP20.13■□□□□ 0.81
RGPD4-AS1-206ENST00000609972 APLP2Q06481 763 aa20.12■□□□□ 0.81
RGPD4-AS1-206ENST00000609972 ATF5Q9Y2D1 282 aaPredicted RBP19.91■□□□□ 0.78
RGPD4-AS1-206ENST00000609972 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
RGPD4-AS1-206ENST00000609972 CAPN15O75808 1086 aa19.78■□□□□ 0.76
RGPD4-AS1-206ENST00000609972 ZNF219Q9P2Y4 722 aaPredicted RBP19.75■□□□□ 0.75
RGPD4-AS1-206ENST00000609972 TRHP20396 242 aaPredicted RBP19.71■□□□□ 0.75
RGPD4-AS1-206ENST00000609972 CACNB1Q02641 598 aaPredicted RBP19.7■□□□□ 0.74
RGPD4-AS1-206ENST00000609972 POLA2Q14181 598 aa19.44■□□□□ 0.7
RGPD4-AS1-206ENST00000609972 DSG3P32926 999 aa19.38■□□□□ 0.69
RGPD4-AS1-206ENST00000609972 ABCB7O75027 752 aa19.37■□□□□ 0.69
RGPD4-AS1-206ENST00000609972 ZBTB12Q9Y330 459 aaPredicted RBP19.19■□□□□ 0.66
RGPD4-AS1-206ENST00000609972 FBLN2P98095 1184 aa19.17■□□□□ 0.66
RGPD4-AS1-206ENST00000609972 MKRN4PQ13434 485 aaPredicted RBP19.07■□□□□ 0.64
RGPD4-AS1-206ENST00000609972 FKBP8Q14318 412 aa18.92■□□□□ 0.62
RGPD4-AS1-206ENST00000609972 SPDYE4A6NLX3 237 aa18.77■□□□□ 0.6
RGPD4-AS1-206ENST00000609972 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
RGPD4-AS1-206ENST00000609972 SPDYE2BA6NHP3 402 aa18.66■□□□□ 0.58
RGPD4-AS1-206ENST00000609972 SPDYE6P0CI01 402 aa18.66■□□□□ 0.58
RGPD4-AS1-206ENST00000609972 SPDYE2Q495Y8 402 aa18.66■□□□□ 0.58
RGPD4-AS1-206ENST00000609972 ZNF692Q9BU19 519 aaPredicted RBP18.6■□□□□ 0.57
RGPD4-AS1-206ENST00000609972 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
RGPD4-AS1-206ENST00000609972 SSUH2Q9Y2M2 353 aa18.49■□□□□ 0.55
RGPD4-AS1-206ENST00000609972 PROM2Q8N271 834 aa18.47■□□□□ 0.55
RGPD4-AS1-206ENST00000609972 PABPN1Q86U42 306 aaKnown RBP eCLIP18.34■□□□□ 0.53
RGPD4-AS1-206ENST00000609972 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
RGPD4-AS1-206ENST00000609972 FBXO3Q9UK99 471 aa18.29■□□□□ 0.52
RGPD4-AS1-206ENST00000609972 STAG3Q9UJ98 1225 aa18.15■□□□□ 0.5
RGPD4-AS1-206ENST00000609972 REM2Q8IYK8 340 aaPredicted RBP18.12■□□□□ 0.49
RGPD4-AS1-206ENST00000609972 SPDYE1Q8NFV5 336 aaPredicted RBP18.07■□□□□ 0.48
RGPD4-AS1-206ENST00000609972 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
RGPD4-AS1-206ENST00000609972 CLEC11AQ9Y240 323 aa17.95■□□□□ 0.46
RGPD4-AS1-206ENST00000609972 PITPNM1O00562 1244 aa17.88■□□□□ 0.45
RGPD4-AS1-206ENST00000609972 PRR29P0C7W0 189 aa17.84■□□□□ 0.45
RGPD4-AS1-206ENST00000609972 MIER1Q8N108 512 aa17.82■□□□□ 0.44
RGPD4-AS1-206ENST00000609972 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
RGPD4-AS1-206ENST00000609972 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
RGPD4-AS1-206ENST00000609972 IFNLR1Q8IU57 520 aaPredicted RBP17.72■□□□□ 0.43
RGPD4-AS1-206ENST00000609972 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
RGPD4-AS1-206ENST00000609972 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
RGPD4-AS1-206ENST00000609972 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
RGPD4-AS1-206ENST00000609972 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
RGPD4-AS1-206ENST00000609972 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
RGPD4-AS1-206ENST00000609972 FXR2P51116 673 aaKnown RBP eCLIP17.54■□□□□ 0.4
RGPD4-AS1-206ENST00000609972 SPOCK2Q92563 424 aa17.53■□□□□ 0.4
RGPD4-AS1-206ENST00000609972 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
RGPD4-AS1-206ENST00000609972 CHADLQ6NUI6 762 aa17.46■□□□□ 0.39
RGPD4-AS1-206ENST00000609972 PIP4P2Q8N4L2 257 aa17.45■□□□□ 0.38
RGPD4-AS1-206ENST00000609972 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
RGPD4-AS1-206ENST00000609972 MNX1P50219 401 aaPredicted RBP17.43■□□□□ 0.38
RGPD4-AS1-206ENST00000609972 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
RGPD4-AS1-206ENST00000609972 FARP1Q9Y4F1 1045 aaPredicted RBP17.36■□□□□ 0.37
RGPD4-AS1-206ENST00000609972 NUBP1P53384 320 aa17.3■□□□□ 0.36
RGPD4-AS1-206ENST00000609972 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
RGPD4-AS1-206ENST00000609972 GSE1Q14687 1217 aa17.21■□□□□ 0.35
RGPD4-AS1-206ENST00000609972 DCAF8Q5TAQ9 597 aa17.19■□□□□ 0.34
RGPD4-AS1-206ENST00000609972 FAM212AQ96EL1 285 aa17.19■□□□□ 0.34
RGPD4-AS1-206ENST00000609972 PKD2Q13563 968 aa17.18■□□□□ 0.34
RGPD4-AS1-206ENST00000609972 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
RGPD4-AS1-206ENST00000609972 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
RGPD4-AS1-206ENST00000609972 ECM2O94769 699 aaPredicted RBP17.09■□□□□ 0.33
RGPD4-AS1-206ENST00000609972 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
RGPD4-AS1-206ENST00000609972 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms