RNA–Protein interactions for RNA: ENST00000609658.1

PNLDC1-204, Transcript of PARN like, ribonuclease domain containing 1, humanhuman

TSL 3

Gene PNLDC1, Length 475 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1-204ENST00000609658 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
PNLDC1-204ENST00000609658 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
PNLDC1-204ENST00000609658 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
PNLDC1-204ENST00000609658 SENP3Q9H4L4 574 aaPredicted RBP14.59□□□□□ -0.07
PNLDC1-204ENST00000609658 FOXD1Q16676 465 aa13.65□□□□□ -0.22
PNLDC1-204ENST00000609658 PLPPR3Q6T4P5 718 aa13.55□□□□□ -0.24
PNLDC1-204ENST00000609658 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
PNLDC1-204ENST00000609658 ADRA2BP18089 450 aa13.13□□□□□ -0.31
PNLDC1-204ENST00000609658 PIAS4Q8N2W9 510 aaPredicted RBP12.86□□□□□ -0.35
PNLDC1-204ENST00000609658 MSH5O43196 834 aa12.49□□□□□ -0.41
PNLDC1-204ENST00000609658 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
PNLDC1-204ENST00000609658 MAPK8IP2Q13387 824 aaPredicted RBP11.96□□□□□ -0.49
PNLDC1-204ENST00000609658 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
PNLDC1-204ENST00000609658 KCNA4P22459 653 aa11.71□□□□□ -0.53
PNLDC1-204ENST00000609658 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
PNLDC1-204ENST00000609658 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
PNLDC1-204ENST00000609658 CNKSR2Q8WXI2 1034 aa11.61□□□□□ -0.55
PNLDC1-204ENST00000609658 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
PNLDC1-204ENST00000609658 NPM3O75607 178 aaKnown RBP11.52□□□□□ -0.57
PNLDC1-204ENST00000609658 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
PNLDC1-204ENST00000609658 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
PNLDC1-204ENST00000609658 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
PNLDC1-204ENST00000609658 SLC4A1APQ9BWU0 796 aaKnown RBP11.09□□□□□ -0.63
PNLDC1-204ENST00000609658 DNAJC5BQ9UF47 199 aa10.96□□□□□ -0.65
PNLDC1-204ENST00000609658 SLC4A2P04920 1241 aa10.9□□□□□ -0.66
PNLDC1-204ENST00000609658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.9□□□□□ -0.66
PNLDC1-204ENST00000609658 EHMT2Q96KQ7 1210 aa10.83□□□□□ -0.68
PNLDC1-204ENST00000609658 ZBTB22O15209 634 aa10.82□□□□□ -0.68
PNLDC1-204ENST00000609658 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
PNLDC1-204ENST00000609658 U3KPZ7 1027 aaPredicted RBP10.74□□□□□ -0.69
PNLDC1-204ENST00000609658 FOXD4L1Q9NU39 408 aa10.7□□□□□ -0.7
PNLDC1-204ENST00000609658 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
PNLDC1-204ENST00000609658 MYCNP04198 464 aaPredicted RBP10.57□□□□□ -0.72
PNLDC1-204ENST00000609658 CACNB1Q02641 598 aaPredicted RBP10.56□□□□□ -0.72
PNLDC1-204ENST00000609658 C1QBPQ07021 282 aaKnown RBP10.55□□□□□ -0.72
PNLDC1-204ENST00000609658 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.73
PNLDC1-204ENST00000609658 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
PNLDC1-204ENST00000609658 CAPN15O75808 1086 aa10.43□□□□□ -0.74
PNLDC1-204ENST00000609658 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
PNLDC1-204ENST00000609658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.41□□□□□ -0.74
PNLDC1-204ENST00000609658 HNRNPUL2Q1KMD3 747 aaKnown RBP10.41□□□□□ -0.74
PNLDC1-204ENST00000609658 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
PNLDC1-204ENST00000609658 ABCB7O75027 752 aa10.31□□□□□ -0.76
PNLDC1-204ENST00000609658 APLP2Q06481 763 aa10.3□□□□□ -0.76
PNLDC1-204ENST00000609658 ZNF219Q9P2Y4 722 aaPredicted RBP10.25□□□□□ -0.77
PNLDC1-204ENST00000609658 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
PNLDC1-204ENST00000609658 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
PNLDC1-204ENST00000609658 DSG3P32926 999 aa10.23□□□□□ -0.77
PNLDC1-204ENST00000609658 POLA2Q14181 598 aa10.18□□□□□ -0.78
PNLDC1-204ENST00000609658 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
PNLDC1-204ENST00000609658 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
PNLDC1-204ENST00000609658 FBLN2P98095 1184 aa9.86□□□□□ -0.83
PNLDC1-204ENST00000609658 ZBTB12Q9Y330 459 aaPredicted RBP9.86□□□□□ -0.83
PNLDC1-204ENST00000609658 RBM42Q9BTD8 480 aaKnown RBP9.65□□□□□ -0.86
PNLDC1-204ENST00000609658 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
PNLDC1-204ENST00000609658 SPDYE4A6NLX3 237 aa9.64□□□□□ -0.87
PNLDC1-204ENST00000609658 FKBP8Q14318 412 aa9.64□□□□□ -0.87
PNLDC1-204ENST00000609658 SPDYE2BA6NHP3 402 aa9.62□□□□□ -0.87
PNLDC1-204ENST00000609658 SPDYE6P0CI01 402 aa9.62□□□□□ -0.87
PNLDC1-204ENST00000609658 SPDYE2Q495Y8 402 aa9.62□□□□□ -0.87
PNLDC1-204ENST00000609658 SSUH2Q9Y2M2 353 aa9.58□□□□□ -0.88
PNLDC1-204ENST00000609658 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
PNLDC1-204ENST00000609658 AKT1S1Q96B36 256 aa9.55□□□□□ -0.88
PNLDC1-204ENST00000609658 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
PNLDC1-204ENST00000609658 MYT1Q01538 1121 aa9.48□□□□□ -0.89
PNLDC1-204ENST00000609658 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
PNLDC1-204ENST00000609658 SLC24A1O60721 1099 aa9.45□□□□□ -0.9
PNLDC1-204ENST00000609658 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
PNLDC1-204ENST00000609658 PROM2Q8N271 834 aa9.4□□□□□ -0.9
PNLDC1-204ENST00000609658 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
PNLDC1-204ENST00000609658 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
PNLDC1-204ENST00000609658 TTBK1Q5TCY1 1321 aaPredicted RBP9.34□□□□□ -0.91
PNLDC1-204ENST00000609658 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
PNLDC1-204ENST00000609658 CHADLQ6NUI6 762 aa9.27□□□□□ -0.93
PNLDC1-204ENST00000609658 PELP1Q8IZL8 1130 aaKnown RBP9.27□□□□□ -0.93
PNLDC1-204ENST00000609658 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
PNLDC1-204ENST00000609658 STAG3Q9UJ98 1225 aa9.23□□□□□ -0.93
PNLDC1-204ENST00000609658 FXR2P51116 673 aaKnown RBP eCLIP9.22□□□□□ -0.93
PNLDC1-204ENST00000609658 PRKAR2AP13861 404 aaKnown RBP9.21□□□□□ -0.94
PNLDC1-204ENST00000609658 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
PNLDC1-204ENST00000609658 MIER1Q8N108 512 aa9.16□□□□□ -0.94
PNLDC1-204ENST00000609658 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
PNLDC1-204ENST00000609658 VASPP50552 380 aaPredicted RBP9.15□□□□□ -0.94
PNLDC1-204ENST00000609658 POTEHQ6S545 545 aa9.15□□□□□ -0.94
PNLDC1-204ENST00000609658 PLCD3Q8N3E9 789 aa9.14□□□□□ -0.95
PNLDC1-204ENST00000609658 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
PNLDC1-204ENST00000609658 FARP1Q9Y4F1 1045 aaPredicted RBP9.07□□□□□ -0.96
PNLDC1-204ENST00000609658 IFNLR1Q8IU57 520 aaPredicted RBP9.05□□□□□ -0.96
PNLDC1-204ENST00000609658 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
PNLDC1-204ENST00000609658 KLHL34Q8N239 644 aa9.03□□□□□ -0.96
PNLDC1-204ENST00000609658 PLEKHG5O94827 1062 aa9.01□□□□□ -0.97
PNLDC1-204ENST00000609658 HAX1O00165 279 aa8.99□□□□□ -0.97
PNLDC1-204ENST00000609658 EVX2Q03828 476 aa8.99□□□□□ -0.97
PNLDC1-204ENST00000609658 RASEFQ8IZ41 740 aa8.95□□□□□ -0.98
PNLDC1-204ENST00000609658 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
PNLDC1-204ENST00000609658 NPM1P06748 294 aaKnown RBP eCLIP8.93□□□□□ -0.98
PNLDC1-204ENST00000609658 TSPYL2Q9H2G4 693 aaPredicted RBP8.93□□□□□ -0.98
PNLDC1-204ENST00000609658 C19orf67A6NJJ6 358 aa8.92□□□□□ -0.98
PNLDC1-204ENST00000609658 NUBP1P53384 320 aa8.92□□□□□ -0.98
PNLDC1-204ENST00000609658 ZBTB47Q9UFB7 747 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms