RNA–Protein interactions for RNA: ENST00000609354.1

RGPD4-AS1-205, Transcript of RGPD4 antisense RNA 1 (head to head), humanhuman

TSL 2

Gene RGPD4-AS1, Length 860 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-AS1-205ENST00000609354 AEBP2Q6ZN18 517 aaPredicted RBP28■■■□□ 2.07
RGPD4-AS1-205ENST00000609354 CHIC1Q5VXU3 224 aa26.53■■□□□ 1.84
RGPD4-AS1-205ENST00000609354 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
RGPD4-AS1-205ENST00000609354 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
RGPD4-AS1-205ENST00000609354 FOXD1Q16676 465 aa22.32■■□□□ 1.16
RGPD4-AS1-205ENST00000609354 PLPPR3Q6T4P5 718 aa21.18■□□□□ 0.98
RGPD4-AS1-205ENST00000609354 MSH5O43196 834 aa21.03■□□□□ 0.96
RGPD4-AS1-205ENST00000609354 PIAS4Q8N2W9 510 aaPredicted RBP20.86■□□□□ 0.93
RGPD4-AS1-205ENST00000609354 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
RGPD4-AS1-205ENST00000609354 ADRA2BP18089 450 aa20.67■□□□□ 0.9
RGPD4-AS1-205ENST00000609354 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
RGPD4-AS1-205ENST00000609354 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
RGPD4-AS1-205ENST00000609354 MAPK8IP2Q13387 824 aaPredicted RBP19■□□□□ 0.63
RGPD4-AS1-205ENST00000609354 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
RGPD4-AS1-205ENST00000609354 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
RGPD4-AS1-205ENST00000609354 HOXD11P31277 338 aaPredicted RBP18.25■□□□□ 0.51
RGPD4-AS1-205ENST00000609354 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
RGPD4-AS1-205ENST00000609354 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
RGPD4-AS1-205ENST00000609354 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
RGPD4-AS1-205ENST00000609354 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
RGPD4-AS1-205ENST00000609354 RNF39Q9H2S5 420 aa17.89■□□□□ 0.45
RGPD4-AS1-205ENST00000609354 NCBP3Q53F19 620 aaKnown RBP17.83■□□□□ 0.44
RGPD4-AS1-205ENST00000609354 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
RGPD4-AS1-205ENST00000609354 C1QBPQ07021 282 aaKnown RBP17.66■□□□□ 0.42
RGPD4-AS1-205ENST00000609354 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
RGPD4-AS1-205ENST00000609354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
RGPD4-AS1-205ENST00000609354 KCNA4P22459 653 aa17.02■□□□□ 0.32
RGPD4-AS1-205ENST00000609354 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
RGPD4-AS1-205ENST00000609354 CAPN15O75808 1086 aa16.76■□□□□ 0.27
RGPD4-AS1-205ENST00000609354 SPINK5Q9NQ38 1064 aaPredicted RBP16.74■□□□□ 0.27
RGPD4-AS1-205ENST00000609354 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
RGPD4-AS1-205ENST00000609354 DSG3P32926 999 aa16.69■□□□□ 0.26
RGPD4-AS1-205ENST00000609354 APLP2Q06481 763 aa16.62■□□□□ 0.25
RGPD4-AS1-205ENST00000609354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
RGPD4-AS1-205ENST00000609354 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
RGPD4-AS1-205ENST00000609354 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
RGPD4-AS1-205ENST00000609354 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
RGPD4-AS1-205ENST00000609354 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
RGPD4-AS1-205ENST00000609354 ABCB7O75027 752 aa16.33■□□□□ 0.2
RGPD4-AS1-205ENST00000609354 MYCNP04198 464 aaPredicted RBP16.24■□□□□ 0.19
RGPD4-AS1-205ENST00000609354 POTEHQ6S545 545 aa16.19■□□□□ 0.18
RGPD4-AS1-205ENST00000609354 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
RGPD4-AS1-205ENST00000609354 RBM42Q9BTD8 480 aaKnown RBP16.01■□□□□ 0.15
RGPD4-AS1-205ENST00000609354 POLA2Q14181 598 aa15.99■□□□□ 0.15
RGPD4-AS1-205ENST00000609354 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
RGPD4-AS1-205ENST00000609354 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
RGPD4-AS1-205ENST00000609354 ZBTB12Q9Y330 459 aaPredicted RBP15.76■□□□□ 0.11
RGPD4-AS1-205ENST00000609354 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
RGPD4-AS1-205ENST00000609354 ZBTB22O15209 634 aa15.62■□□□□ 0.09
RGPD4-AS1-205ENST00000609354 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
RGPD4-AS1-205ENST00000609354 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
RGPD4-AS1-205ENST00000609354 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
RGPD4-AS1-205ENST00000609354 REM2Q8IYK8 340 aaPredicted RBP15.4■□□□□ 0.06
RGPD4-AS1-205ENST00000609354 FBLN2P98095 1184 aa15.28■□□□□ 0.04
RGPD4-AS1-205ENST00000609354 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
RGPD4-AS1-205ENST00000609354 PIP4P2Q8N4L2 257 aa15.23■□□□□ 0.03
RGPD4-AS1-205ENST00000609354 SPDYE2BA6NHP3 402 aa15.22■□□□□ 0.03
RGPD4-AS1-205ENST00000609354 SPDYE6P0CI01 402 aa15.22■□□□□ 0.03
RGPD4-AS1-205ENST00000609354 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
RGPD4-AS1-205ENST00000609354 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
RGPD4-AS1-205ENST00000609354 SP7Q8TDD2 431 aaPredicted RBP15.13■□□□□ 0.01
RGPD4-AS1-205ENST00000609354 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
RGPD4-AS1-205ENST00000609354 MKRN4PQ13434 485 aaPredicted RBP15.06■□□□□ 0
RGPD4-AS1-205ENST00000609354 HAX1O00165 279 aa15□□□□□ -0.01
RGPD4-AS1-205ENST00000609354 SPDYE1Q8NFV5 336 aaPredicted RBP14.98□□□□□ -0.01
RGPD4-AS1-205ENST00000609354 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
RGPD4-AS1-205ENST00000609354 SSUH2Q9Y2M2 353 aa14.97□□□□□ -0.01
RGPD4-AS1-205ENST00000609354 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
RGPD4-AS1-205ENST00000609354 CLEC11AQ9Y240 323 aa14.91□□□□□ -0.02
RGPD4-AS1-205ENST00000609354 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
RGPD4-AS1-205ENST00000609354 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
RGPD4-AS1-205ENST00000609354 EVX2Q03828 476 aa14.73□□□□□ -0.05
RGPD4-AS1-205ENST00000609354 PRR29P0C7W0 189 aa14.68□□□□□ -0.06
RGPD4-AS1-205ENST00000609354 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
RGPD4-AS1-205ENST00000609354 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
RGPD4-AS1-205ENST00000609354 GABBR2O75899 941 aa14.45□□□□□ -0.1
RGPD4-AS1-205ENST00000609354 FARP1Q9Y4F1 1045 aaPredicted RBP14.43□□□□□ -0.1
RGPD4-AS1-205ENST00000609354 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
RGPD4-AS1-205ENST00000609354 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
RGPD4-AS1-205ENST00000609354 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
RGPD4-AS1-205ENST00000609354 CLCN6P51797 869 aa14.31□□□□□ -0.12
RGPD4-AS1-205ENST00000609354 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
RGPD4-AS1-205ENST00000609354 LHX8Q68G74 356 aa14.18□□□□□ -0.14
RGPD4-AS1-205ENST00000609354 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
RGPD4-AS1-205ENST00000609354 ZRANB1Q9UGI0 708 aa14.14□□□□□ -0.15
RGPD4-AS1-205ENST00000609354 POTEIP0CG38 1075 aa14.11□□□□□ -0.15
RGPD4-AS1-205ENST00000609354 DCBLD2Q96PD2 775 aa14.08□□□□□ -0.16
RGPD4-AS1-205ENST00000609354 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
RGPD4-AS1-205ENST00000609354 NPM1P06748 294 aaKnown RBP eCLIP14.06□□□□□ -0.16
RGPD4-AS1-205ENST00000609354 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
RGPD4-AS1-205ENST00000609354 PROM2Q8N271 834 aa13.97□□□□□ -0.17
RGPD4-AS1-205ENST00000609354 GALR2O43603 387 aaPredicted RBP13.94□□□□□ -0.18
RGPD4-AS1-205ENST00000609354 PHF12Q96QT6 1004 aa13.9□□□□□ -0.18
RGPD4-AS1-205ENST00000609354 PLEKHG5O94827 1062 aa13.77□□□□□ -0.21
RGPD4-AS1-205ENST00000609354 MS4A3Q96HJ5 214 aa13.73□□□□□ -0.21
RGPD4-AS1-205ENST00000609354 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
RGPD4-AS1-205ENST00000609354 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
RGPD4-AS1-205ENST00000609354 MIER1Q8N108 512 aa13.69□□□□□ -0.22
RGPD4-AS1-205ENST00000609354 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
RGPD4-AS1-205ENST00000609354 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms