RNA–Protein interactions for RNA: ENST00000608965.5

CFTR-209, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-209ENST00000608965 AEBP2Q6ZN18 517 aaPredicted RBP27.15■■□□□ 1.94
CFTR-209ENST00000608965 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
CFTR-209ENST00000608965 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
CFTR-209ENST00000608965 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
CFTR-209ENST00000608965 FOXD1Q16676 465 aa21.63■■□□□ 1.05
CFTR-209ENST00000608965 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
CFTR-209ENST00000608965 MSH5O43196 834 aa20.39■□□□□ 0.85
CFTR-209ENST00000608965 PIAS4Q8N2W9 510 aaPredicted RBP20.3■□□□□ 0.84
CFTR-209ENST00000608965 PPP6R1Q9UPN7 881 aa20.24■□□□□ 0.83
CFTR-209ENST00000608965 ADRA2BP18089 450 aa20.21■□□□□ 0.83
CFTR-209ENST00000608965 POTEDQ86YR6 584 aa19.54■□□□□ 0.72
CFTR-209ENST00000608965 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
CFTR-209ENST00000608965 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
CFTR-209ENST00000608965 DMRT2Q9Y5R5 561 aa18.5■□□□□ 0.55
CFTR-209ENST00000608965 PPP4R3CPQ6ZMV5 832 aa18.3■□□□□ 0.52
CFTR-209ENST00000608965 CNKSR2Q8WXI2 1034 aa18■□□□□ 0.47
CFTR-209ENST00000608965 HOXD11P31277 338 aaPredicted RBP17.87■□□□□ 0.45
CFTR-209ENST00000608965 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
CFTR-209ENST00000608965 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
CFTR-209ENST00000608965 DCAF8L1A6NGE4 600 aa17.74■□□□□ 0.43
CFTR-209ENST00000608965 DNAJC5BQ9UF47 199 aa17.38■□□□□ 0.37
CFTR-209ENST00000608965 CACNB1Q02641 598 aaPredicted RBP17.37■□□□□ 0.37
CFTR-209ENST00000608965 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
CFTR-209ENST00000608965 RNF39Q9H2S5 420 aa17.3■□□□□ 0.36
CFTR-209ENST00000608965 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
CFTR-209ENST00000608965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
CFTR-209ENST00000608965 KCNA4P22459 653 aa17.04■□□□□ 0.32
CFTR-209ENST00000608965 U3KPZ7 1027 aaPredicted RBP16.6■□□□□ 0.25
CFTR-209ENST00000608965 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
CFTR-209ENST00000608965 APLP2Q06481 763 aa16.46■□□□□ 0.23
CFTR-209ENST00000608965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
CFTR-209ENST00000608965 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
CFTR-209ENST00000608965 CAPN15O75808 1086 aa16.38■□□□□ 0.21
CFTR-209ENST00000608965 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
CFTR-209ENST00000608965 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
CFTR-209ENST00000608965 DSG3P32926 999 aa16.22■□□□□ 0.19
CFTR-209ENST00000608965 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
CFTR-209ENST00000608965 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
CFTR-209ENST00000608965 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
CFTR-209ENST00000608965 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
CFTR-209ENST00000608965 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
CFTR-209ENST00000608965 ABCB7O75027 752 aa15.91■□□□□ 0.14
CFTR-209ENST00000608965 EHMT2Q96KQ7 1210 aa15.75■□□□□ 0.11
CFTR-209ENST00000608965 POLA2Q14181 598 aa15.73■□□□□ 0.11
CFTR-209ENST00000608965 RBM42Q9BTD8 480 aaKnown RBP15.64■□□□□ 0.09
CFTR-209ENST00000608965 ATXN8OSP0DMR3 200 aa15.59■□□□□ 0.09
CFTR-209ENST00000608965 ZBTB22O15209 634 aa15.58■□□□□ 0.08
CFTR-209ENST00000608965 ZBTB12Q9Y330 459 aaPredicted RBP15.58■□□□□ 0.08
CFTR-209ENST00000608965 ATF5Q9Y2D1 282 aaPredicted RBP15.55■□□□□ 0.08
CFTR-209ENST00000608965 POTEHQ6S545 545 aa15.39■□□□□ 0.05
CFTR-209ENST00000608965 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
CFTR-209ENST00000608965 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
CFTR-209ENST00000608965 FBLN2P98095 1184 aa15.2■□□□□ 0.02
CFTR-209ENST00000608965 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
CFTR-209ENST00000608965 CHRDL2Q6WN34 429 aa15.13■□□□□ 0.01
CFTR-209ENST00000608965 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
CFTR-209ENST00000608965 SPDYE6P0CI01 402 aa15.02■□□□□ -0
CFTR-209ENST00000608965 SPDYE2Q495Y8 402 aa15.02■□□□□ -0
CFTR-209ENST00000608965 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
CFTR-209ENST00000608965 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
CFTR-209ENST00000608965 ZNF692Q9BU19 519 aaPredicted RBP14.84□□□□□ -0.03
CFTR-209ENST00000608965 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
CFTR-209ENST00000608965 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
CFTR-209ENST00000608965 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
CFTR-209ENST00000608965 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
CFTR-209ENST00000608965 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
CFTR-209ENST00000608965 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
CFTR-209ENST00000608965 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
CFTR-209ENST00000608965 HAX1O00165 279 aa14.53□□□□□ -0.08
CFTR-209ENST00000608965 SP7Q8TDD2 431 aaPredicted RBP14.49□□□□□ -0.09
CFTR-209ENST00000608965 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
CFTR-209ENST00000608965 PRKAR2AP13861 404 aaKnown RBP14.48□□□□□ -0.09
CFTR-209ENST00000608965 STAG3Q9UJ98 1225 aa14.37□□□□□ -0.11
CFTR-209ENST00000608965 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
CFTR-209ENST00000608965 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
CFTR-209ENST00000608965 C19orf67A6NJJ6 358 aa14.23□□□□□ -0.13
CFTR-209ENST00000608965 EVX2Q03828 476 aa14.17□□□□□ -0.14
CFTR-209ENST00000608965 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
CFTR-209ENST00000608965 CLCN6P51797 869 aa14.08□□□□□ -0.16
CFTR-209ENST00000608965 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
CFTR-209ENST00000608965 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
CFTR-209ENST00000608965 GABBR2O75899 941 aa13.99□□□□□ -0.17
CFTR-209ENST00000608965 FKBP8Q14318 412 aa13.98□□□□□ -0.17
CFTR-209ENST00000608965 PROM2Q8N271 834 aa13.98□□□□□ -0.17
CFTR-209ENST00000608965 NPM1P06748 294 aaKnown RBP eCLIP13.96□□□□□ -0.17
CFTR-209ENST00000608965 PAK3O75914 559 aaPredicted RBP13.91□□□□□ -0.18
CFTR-209ENST00000608965 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
CFTR-209ENST00000608965 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
CFTR-209ENST00000608965 ZNF579Q8NAF0 562 aaKnown RBP13.84□□□□□ -0.19
CFTR-209ENST00000608965 MNX1P50219 401 aaPredicted RBP13.78□□□□□ -0.2
CFTR-209ENST00000608965 DCBLD2Q96PD2 775 aa13.74□□□□□ -0.21
CFTR-209ENST00000608965 MIER1Q8N108 512 aa13.73□□□□□ -0.21
CFTR-209ENST00000608965 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
CFTR-209ENST00000608965 PLCD3Q8N3E9 789 aa13.63□□□□□ -0.23
CFTR-209ENST00000608965 LHX8Q68G74 356 aa13.61□□□□□ -0.23
CFTR-209ENST00000608965 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
CFTR-209ENST00000608965 PHF12Q96QT6 1004 aa13.58□□□□□ -0.24
CFTR-209ENST00000608965 FBXO3Q9UK99 471 aa13.58□□□□□ -0.24
CFTR-209ENST00000608965 GALR2O43603 387 aaPredicted RBP13.57□□□□□ -0.24
CFTR-209ENST00000608965 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms