RNA–Protein interactions for RNA: ENST00000608855.1

GNPDA2-206, Transcript of glucosamine-6-phosphate deaminase 2, humanhuman

TSL 3

Gene GNPDA2, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA2-206ENST00000608855 AEBP2Q6ZN18 517 aaPredicted RBP35.07■■■■□ 3.2
GNPDA2-206ENST00000608855 CHIC1Q5VXU3 224 aa32.83■■■□□ 2.85
GNPDA2-206ENST00000608855 SENP3Q9H4L4 574 aaPredicted RBP29.98■■■□□ 2.39
GNPDA2-206ENST00000608855 PHF23Q9BUL5 403 aaPredicted RBP29.52■■■□□ 2.32
GNPDA2-206ENST00000608855 FOXD1Q16676 465 aa28.01■■■□□ 2.07
GNPDA2-206ENST00000608855 POTEDQ86YR6 584 aa26.61■■□□□ 1.85
GNPDA2-206ENST00000608855 MSH5O43196 834 aa26.4■■□□□ 1.82
GNPDA2-206ENST00000608855 PIAS4Q8N2W9 510 aaPredicted RBP26.01■■□□□ 1.75
GNPDA2-206ENST00000608855 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
GNPDA2-206ENST00000608855 PPP6R1Q9UPN7 881 aa25.81■■□□□ 1.72
GNPDA2-206ENST00000608855 ADRA2BP18089 450 aa25.66■■□□□ 1.7
GNPDA2-206ENST00000608855 MAPK8IP2Q13387 824 aaPredicted RBP23.73■■□□□ 1.39
GNPDA2-206ENST00000608855 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
GNPDA2-206ENST00000608855 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
GNPDA2-206ENST00000608855 CACNB1Q02641 598 aaPredicted RBP22.91■■□□□ 1.26
GNPDA2-206ENST00000608855 PPP4R3CPQ6ZMV5 832 aa22.71■■□□□ 1.23
GNPDA2-206ENST00000608855 HOXD11P31277 338 aaPredicted RBP22.67■■□□□ 1.22
GNPDA2-206ENST00000608855 DCAF8L1A6NGE4 600 aa22.65■■□□□ 1.22
GNPDA2-206ENST00000608855 RNF39Q9H2S5 420 aa22.5■■□□□ 1.19
GNPDA2-206ENST00000608855 CNKSR2Q8WXI2 1034 aa22.41■■□□□ 1.18
GNPDA2-206ENST00000608855 RNF216Q9NWF9 866 aaPredicted RBP22.35■■□□□ 1.17
GNPDA2-206ENST00000608855 C1QBPQ07021 282 aaKnown RBP22.14■■□□□ 1.13
GNPDA2-206ENST00000608855 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
GNPDA2-206ENST00000608855 NCBP3Q53F19 620 aaKnown RBP21.67■■□□□ 1.06
GNPDA2-206ENST00000608855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.03
GNPDA2-206ENST00000608855 NPM3O75607 178 aaKnown RBP21.38■■□□□ 1.01
GNPDA2-206ENST00000608855 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
GNPDA2-206ENST00000608855 DSG3P32926 999 aa20.89■□□□□ 0.93
GNPDA2-206ENST00000608855 SPINK5Q9NQ38 1064 aaPredicted RBP20.88■□□□□ 0.93
GNPDA2-206ENST00000608855 CAPN15O75808 1086 aa20.83■□□□□ 0.93
GNPDA2-206ENST00000608855 POTEHQ6S545 545 aa20.74■□□□□ 0.91
GNPDA2-206ENST00000608855 SLC4A2P04920 1241 aa20.57■□□□□ 0.88
GNPDA2-206ENST00000608855 KCNA4P22459 653 aa20.51■□□□□ 0.87
GNPDA2-206ENST00000608855 APLP2Q06481 763 aa20.39■□□□□ 0.85
GNPDA2-206ENST00000608855 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
GNPDA2-206ENST00000608855 ZNF219Q9P2Y4 722 aaPredicted RBP20.36■□□□□ 0.85
GNPDA2-206ENST00000608855 ABCB7O75027 752 aa20.3■□□□□ 0.84
GNPDA2-206ENST00000608855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
GNPDA2-206ENST00000608855 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
GNPDA2-206ENST00000608855 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.81
GNPDA2-206ENST00000608855 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
GNPDA2-206ENST00000608855 MYCNP04198 464 aaPredicted RBP19.77■□□□□ 0.76
GNPDA2-206ENST00000608855 POLA2Q14181 598 aa19.75■□□□□ 0.75
GNPDA2-206ENST00000608855 CHRDL2Q6WN34 429 aa19.68■□□□□ 0.74
GNPDA2-206ENST00000608855 AKT1S1Q96B36 256 aa19.38■□□□□ 0.69
GNPDA2-206ENST00000608855 ATF5Q9Y2D1 282 aaPredicted RBP19.37■□□□□ 0.69
GNPDA2-206ENST00000608855 ZBTB12Q9Y330 459 aaPredicted RBP19.32■□□□□ 0.68
GNPDA2-206ENST00000608855 FOXD4L1Q9NU39 408 aa19.31■□□□□ 0.68
GNPDA2-206ENST00000608855 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
GNPDA2-206ENST00000608855 SP7Q8TDD2 431 aaPredicted RBP19.21■□□□□ 0.67
GNPDA2-206ENST00000608855 REM2Q8IYK8 340 aaPredicted RBP19.19■□□□□ 0.66
GNPDA2-206ENST00000608855 OSCARQ8IYS5 282 aa19.13■□□□□ 0.65
GNPDA2-206ENST00000608855 PIP4P2Q8N4L2 257 aa19.12■□□□□ 0.65
GNPDA2-206ENST00000608855 PITPNM1O00562 1244 aa18.99■□□□□ 0.63
GNPDA2-206ENST00000608855 FXR2P51116 673 aaKnown RBP eCLIP18.96■□□□□ 0.63
GNPDA2-206ENST00000608855 ZBTB22O15209 634 aa18.87■□□□□ 0.61
GNPDA2-206ENST00000608855 HAX1O00165 279 aa18.86■□□□□ 0.61
GNPDA2-206ENST00000608855 ATXN8OSP0DMR3 200 aa18.8■□□□□ 0.6
GNPDA2-206ENST00000608855 SPDYE2BA6NHP3 402 aa18.7■□□□□ 0.58
GNPDA2-206ENST00000608855 SPDYE6P0CI01 402 aa18.7■□□□□ 0.58
GNPDA2-206ENST00000608855 SPDYE2Q495Y8 402 aa18.7■□□□□ 0.58
GNPDA2-206ENST00000608855 EVX2Q03828 476 aa18.64■□□□□ 0.57
GNPDA2-206ENST00000608855 FBLN2P98095 1184 aa18.61■□□□□ 0.57
GNPDA2-206ENST00000608855 PRKAR2AP13861 404 aaKnown RBP18.47■□□□□ 0.55
GNPDA2-206ENST00000608855 SPDYE1Q8NFV5 336 aaPredicted RBP18.47■□□□□ 0.55
GNPDA2-206ENST00000608855 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
GNPDA2-206ENST00000608855 CLEC11AQ9Y240 323 aa18.42■□□□□ 0.54
GNPDA2-206ENST00000608855 SSUH2Q9Y2M2 353 aa18.41■□□□□ 0.54
GNPDA2-206ENST00000608855 C19orf67A6NJJ6 358 aa18.36■□□□□ 0.53
GNPDA2-206ENST00000608855 ZNF692Q9BU19 519 aaPredicted RBP18.36■□□□□ 0.53
GNPDA2-206ENST00000608855 GABBR2O75899 941 aa18.19■□□□□ 0.5
GNPDA2-206ENST00000608855 CHADLQ6NUI6 762 aa18.14■□□□□ 0.49
GNPDA2-206ENST00000608855 PRR29P0C7W0 189 aa18.07■□□□□ 0.48
GNPDA2-206ENST00000608855 PABPN1Q86U42 306 aaKnown RBP eCLIP18.07■□□□□ 0.48
GNPDA2-206ENST00000608855 LHX8Q68G74 356 aa18.01■□□□□ 0.47
GNPDA2-206ENST00000608855 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
GNPDA2-206ENST00000608855 CD44P16070 742 aaKnown RBP17.85■□□□□ 0.45
GNPDA2-206ENST00000608855 POTEIP0CG38 1075 aa17.82■□□□□ 0.44
GNPDA2-206ENST00000608855 CLCN6P51797 869 aa17.78■□□□□ 0.44
GNPDA2-206ENST00000608855 ZNF579Q8NAF0 562 aaKnown RBP17.6■□□□□ 0.41
GNPDA2-206ENST00000608855 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
GNPDA2-206ENST00000608855 DCBLD2Q96PD2 775 aa17.55■□□□□ 0.4
GNPDA2-206ENST00000608855 CREBZFQ9NS37 354 aa17.55■□□□□ 0.4
GNPDA2-206ENST00000608855 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
GNPDA2-206ENST00000608855 STAG3Q9UJ98 1225 aa17.5■□□□□ 0.39
GNPDA2-206ENST00000608855 GALR2O43603 387 aaPredicted RBP17.39■□□□□ 0.37
GNPDA2-206ENST00000608855 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
GNPDA2-206ENST00000608855 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
GNPDA2-206ENST00000608855 OTUD5Q96G74 571 aa17.25■□□□□ 0.35
GNPDA2-206ENST00000608855 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
GNPDA2-206ENST00000608855 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
GNPDA2-206ENST00000608855 MNX1P50219 401 aaPredicted RBP17.22■□□□□ 0.35
GNPDA2-206ENST00000608855 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
GNPDA2-206ENST00000608855 PLSCR2Q9NRY7 297 aa17.18■□□□□ 0.34
GNPDA2-206ENST00000608855 PELP1Q8IZL8 1130 aaKnown RBP17.12■□□□□ 0.33
GNPDA2-206ENST00000608855 ASTLQ6HA08 431 aaPredicted RBP17.03■□□□□ 0.32
GNPDA2-206ENST00000608855 MS4A3Q96HJ5 214 aa17■□□□□ 0.31
GNPDA2-206ENST00000608855 ATMINO43313 823 aaPredicted RBP16.97■□□□□ 0.31
GNPDA2-206ENST00000608855 EHMT2Q96KQ7 1210 aa16.97■□□□□ 0.31
GNPDA2-206ENST00000608855 POTEMA6NI47 508 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms