RNA–Protein interactions for RNA: ENST00000608673.1

SUCO-206, Transcript of SUN domain containing ossification factor, humanhuman

TSL 4

Gene SUCO, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCO-206ENST00000608673 AEBP2Q6ZN18 517 aaPredicted RBP35.68■■■■□ 3.3
SUCO-206ENST00000608673 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
SUCO-206ENST00000608673 SENP3Q9H4L4 574 aaPredicted RBP30.44■■■□□ 2.46
SUCO-206ENST00000608673 PHF23Q9BUL5 403 aaPredicted RBP30.06■■■□□ 2.4
SUCO-206ENST00000608673 FOXD1Q16676 465 aa28.3■■■□□ 2.12
SUCO-206ENST00000608673 PLPPR3Q6T4P5 718 aa27.45■■□□□ 1.98
SUCO-206ENST00000608673 PPP6R1Q9UPN7 881 aa26.65■■□□□ 1.86
SUCO-206ENST00000608673 ADRA2BP18089 450 aa26.59■■□□□ 1.85
SUCO-206ENST00000608673 PIAS4Q8N2W9 510 aaPredicted RBP26.52■■□□□ 1.84
SUCO-206ENST00000608673 MSH5O43196 834 aa26.42■■□□□ 1.82
SUCO-206ENST00000608673 POTEDQ86YR6 584 aa25.29■■□□□ 1.64
SUCO-206ENST00000608673 SCAF1Q9H7N4 1312 aaKnown RBP24.38■■□□□ 1.49
SUCO-206ENST00000608673 MAPK8IP2Q13387 824 aaPredicted RBP24.33■■□□□ 1.49
SUCO-206ENST00000608673 DMRT2Q9Y5R5 561 aa24.17■■□□□ 1.46
SUCO-206ENST00000608673 PPP4R3CPQ6ZMV5 832 aa24.08■■□□□ 1.45
SUCO-206ENST00000608673 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
SUCO-206ENST00000608673 HOXD11P31277 338 aaPredicted RBP23.4■■□□□ 1.34
SUCO-206ENST00000608673 RNF216Q9NWF9 866 aaPredicted RBP23.3■■□□□ 1.32
SUCO-206ENST00000608673 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
SUCO-206ENST00000608673 DCAF8L1A6NGE4 600 aa23.13■■□□□ 1.29
SUCO-206ENST00000608673 NPM3O75607 178 aaKnown RBP22.89■■□□□ 1.25
SUCO-206ENST00000608673 KCNA4P22459 653 aa22.68■■□□□ 1.22
SUCO-206ENST00000608673 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
SUCO-206ENST00000608673 RNF39Q9H2S5 420 aa22.55■■□□□ 1.2
SUCO-206ENST00000608673 CACNB1Q02641 598 aaPredicted RBP22.48■■□□□ 1.19
SUCO-206ENST00000608673 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
SUCO-206ENST00000608673 C1QBPQ07021 282 aaKnown RBP22.26■■□□□ 1.15
SUCO-206ENST00000608673 U3KPZ7 1027 aaPredicted RBP21.84■■□□□ 1.09
SUCO-206ENST00000608673 SLC4A2P04920 1241 aa21.79■■□□□ 1.08
SUCO-206ENST00000608673 SLC4A1APQ9BWU0 796 aaKnown RBP21.48■■□□□ 1.03
SUCO-206ENST00000608673 SPINK5Q9NQ38 1064 aaPredicted RBP21.42■■□□□ 1.02
SUCO-206ENST00000608673 CAPN15O75808 1086 aa21.38■■□□□ 1.01
SUCO-206ENST00000608673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.35■■□□□ 1.01
SUCO-206ENST00000608673 HNRNPUL2Q1KMD3 747 aaKnown RBP21.35■■□□□ 1.01
SUCO-206ENST00000608673 APLP2Q06481 763 aa21.31■■□□□ 1
SUCO-206ENST00000608673 SAMD1Q6SPF0 538 aaPredicted RBP21.23■□□□□ 0.99
SUCO-206ENST00000608673 DSG3P32926 999 aa21.21■□□□□ 0.99
SUCO-206ENST00000608673 MYCNP04198 464 aaPredicted RBP21.19■□□□□ 0.98
SUCO-206ENST00000608673 FOXD4L1Q9NU39 408 aa21.12■□□□□ 0.97
SUCO-206ENST00000608673 ZNF219Q9P2Y4 722 aaPredicted RBP21.11■□□□□ 0.97
SUCO-206ENST00000608673 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
SUCO-206ENST00000608673 ABCB7O75027 752 aa20.9■□□□□ 0.94
SUCO-206ENST00000608673 ZBTB22O15209 634 aa20.84■□□□□ 0.93
SUCO-206ENST00000608673 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
SUCO-206ENST00000608673 POLA2Q14181 598 aa20.6■□□□□ 0.89
SUCO-206ENST00000608673 ATXN8OSP0DMR3 200 aa20.46■□□□□ 0.87
SUCO-206ENST00000608673 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
SUCO-206ENST00000608673 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
SUCO-206ENST00000608673 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
SUCO-206ENST00000608673 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
SUCO-206ENST00000608673 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
SUCO-206ENST00000608673 POTEHQ6S545 545 aa19.88■□□□□ 0.77
SUCO-206ENST00000608673 FBLN2P98095 1184 aa19.86■□□□□ 0.77
SUCO-206ENST00000608673 AKT1S1Q96B36 256 aa19.85■□□□□ 0.77
SUCO-206ENST00000608673 MKRN4PQ13434 485 aaPredicted RBP19.71■□□□□ 0.75
SUCO-206ENST00000608673 CHRDL2Q6WN34 429 aa19.67■□□□□ 0.74
SUCO-206ENST00000608673 SPDYE2BA6NHP3 402 aa19.64■□□□□ 0.73
SUCO-206ENST00000608673 SPDYE6P0CI01 402 aa19.64■□□□□ 0.73
SUCO-206ENST00000608673 SPDYE2Q495Y8 402 aa19.64■□□□□ 0.73
SUCO-206ENST00000608673 REM2Q8IYK8 340 aaPredicted RBP19.63■□□□□ 0.73
SUCO-206ENST00000608673 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
SUCO-206ENST00000608673 PITPNM1O00562 1244 aa19.41■□□□□ 0.7
SUCO-206ENST00000608673 SSUH2Q9Y2M2 353 aa19.4■□□□□ 0.7
SUCO-206ENST00000608673 PIP4P2Q8N4L2 257 aa19.26■□□□□ 0.67
SUCO-206ENST00000608673 SPDYE1Q8NFV5 336 aaPredicted RBP19.23■□□□□ 0.67
SUCO-206ENST00000608673 FXR2P51116 673 aaKnown RBP eCLIP19.21■□□□□ 0.67
SUCO-206ENST00000608673 PABPN1Q86U42 306 aaKnown RBP eCLIP19.15■□□□□ 0.66
SUCO-206ENST00000608673 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
SUCO-206ENST00000608673 SPDYE4A6NLX3 237 aa18.93■□□□□ 0.62
SUCO-206ENST00000608673 PRKAR2AP13861 404 aaKnown RBP18.92■□□□□ 0.62
SUCO-206ENST00000608673 PRR29P0C7W0 189 aa18.89■□□□□ 0.61
SUCO-206ENST00000608673 HAX1O00165 279 aa18.84■□□□□ 0.61
SUCO-206ENST00000608673 SP7Q8TDD2 431 aaPredicted RBP18.77■□□□□ 0.6
SUCO-206ENST00000608673 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
SUCO-206ENST00000608673 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
SUCO-206ENST00000608673 EVX2Q03828 476 aa18.6■□□□□ 0.57
SUCO-206ENST00000608673 C19orf67A6NJJ6 358 aa18.58■□□□□ 0.56
SUCO-206ENST00000608673 PROM2Q8N271 834 aa18.54■□□□□ 0.56
SUCO-206ENST00000608673 FARP1Q9Y4F1 1045 aaPredicted RBP18.52■□□□□ 0.56
SUCO-206ENST00000608673 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
SUCO-206ENST00000608673 CD44P16070 742 aaKnown RBP18.34■□□□□ 0.53
SUCO-206ENST00000608673 FKBP8Q14318 412 aa18.26■□□□□ 0.51
SUCO-206ENST00000608673 GABBR2O75899 941 aa18.23■□□□□ 0.51
SUCO-206ENST00000608673 MNX1P50219 401 aaPredicted RBP18.19■□□□□ 0.5
SUCO-206ENST00000608673 NPM1P06748 294 aaKnown RBP eCLIP18.18■□□□□ 0.5
SUCO-206ENST00000608673 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
SUCO-206ENST00000608673 CLCN6P51797 869 aa18.1■□□□□ 0.49
SUCO-206ENST00000608673 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
SUCO-206ENST00000608673 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
SUCO-206ENST00000608673 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
SUCO-206ENST00000608673 MIER1Q8N108 512 aa18.02■□□□□ 0.48
SUCO-206ENST00000608673 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
SUCO-206ENST00000608673 PHF12Q96QT6 1004 aa17.88■□□□□ 0.45
SUCO-206ENST00000608673 FBXO3Q9UK99 471 aa17.84■□□□□ 0.45
SUCO-206ENST00000608673 POTEIP0CG38 1075 aa17.83■□□□□ 0.44
SUCO-206ENST00000608673 GALR2O43603 387 aaPredicted RBP17.82■□□□□ 0.44
SUCO-206ENST00000608673 TSPYL2Q9H2G4 693 aaPredicted RBP17.82■□□□□ 0.44
SUCO-206ENST00000608673 DCBLD2Q96PD2 775 aa17.8■□□□□ 0.44
SUCO-206ENST00000608673 ZBTB47Q9UFB7 747 aaPredicted RBP17.8■□□□□ 0.44
SUCO-206ENST00000608673 CCDC61Q9Y6R9 512 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms