RNA–Protein interactions for RNA: ENST00000608490.1

CSNK2A1-207, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-207ENST00000608490 AEBP2Q6ZN18 517 aaPredicted RBP29.16■■■□□ 2.26
CSNK2A1-207ENST00000608490 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
CSNK2A1-207ENST00000608490 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
CSNK2A1-207ENST00000608490 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
CSNK2A1-207ENST00000608490 FOXD1Q16676 465 aa23.15■■□□□ 1.3
CSNK2A1-207ENST00000608490 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
CSNK2A1-207ENST00000608490 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
CSNK2A1-207ENST00000608490 ADRA2BP18089 450 aa21.65■■□□□ 1.06
CSNK2A1-207ENST00000608490 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
CSNK2A1-207ENST00000608490 MSH5O43196 834 aa21.57■■□□□ 1.04
CSNK2A1-207ENST00000608490 POTEDQ86YR6 584 aa21.07■□□□□ 0.96
CSNK2A1-207ENST00000608490 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
CSNK2A1-207ENST00000608490 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
CSNK2A1-207ENST00000608490 DMRT2Q9Y5R5 561 aa19.67■□□□□ 0.74
CSNK2A1-207ENST00000608490 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
CSNK2A1-207ENST00000608490 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
CSNK2A1-207ENST00000608490 HOXD11P31277 338 aaPredicted RBP18.95■□□□□ 0.62
CSNK2A1-207ENST00000608490 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
CSNK2A1-207ENST00000608490 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
CSNK2A1-207ENST00000608490 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
CSNK2A1-207ENST00000608490 CACNB1Q02641 598 aaPredicted RBP18.55■□□□□ 0.56
CSNK2A1-207ENST00000608490 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
CSNK2A1-207ENST00000608490 NPM3O75607 178 aaKnown RBP18.4■□□□□ 0.54
CSNK2A1-207ENST00000608490 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
CSNK2A1-207ENST00000608490 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
CSNK2A1-207ENST00000608490 KCNA4P22459 653 aa18.12■□□□□ 0.49
CSNK2A1-207ENST00000608490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
CSNK2A1-207ENST00000608490 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
CSNK2A1-207ENST00000608490 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
CSNK2A1-207ENST00000608490 SPINK5Q9NQ38 1064 aaPredicted RBP17.49■□□□□ 0.39
CSNK2A1-207ENST00000608490 CAPN15O75808 1086 aa17.43■□□□□ 0.38
CSNK2A1-207ENST00000608490 DSG3P32926 999 aa17.3■□□□□ 0.36
CSNK2A1-207ENST00000608490 TRHP20396 242 aaPredicted RBP17.18■□□□□ 0.34
CSNK2A1-207ENST00000608490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
CSNK2A1-207ENST00000608490 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
CSNK2A1-207ENST00000608490 APLP2Q06481 763 aa17.11■□□□□ 0.33
CSNK2A1-207ENST00000608490 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
CSNK2A1-207ENST00000608490 ABCB7O75027 752 aa17.07■□□□□ 0.32
CSNK2A1-207ENST00000608490 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
CSNK2A1-207ENST00000608490 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
CSNK2A1-207ENST00000608490 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
CSNK2A1-207ENST00000608490 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
CSNK2A1-207ENST00000608490 POLA2Q14181 598 aa16.71■□□□□ 0.27
CSNK2A1-207ENST00000608490 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
CSNK2A1-207ENST00000608490 ZBTB22O15209 634 aa16.68■□□□□ 0.26
CSNK2A1-207ENST00000608490 POTEHQ6S545 545 aa16.5■□□□□ 0.23
CSNK2A1-207ENST00000608490 RBM42Q9BTD8 480 aaKnown RBP16.44■□□□□ 0.22
CSNK2A1-207ENST00000608490 ATXN8OSP0DMR3 200 aa16.27■□□□□ 0.2
CSNK2A1-207ENST00000608490 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
CSNK2A1-207ENST00000608490 OSCARQ8IYS5 282 aa16.18■□□□□ 0.18
CSNK2A1-207ENST00000608490 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
CSNK2A1-207ENST00000608490 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
CSNK2A1-207ENST00000608490 REM2Q8IYK8 340 aaPredicted RBP16■□□□□ 0.15
CSNK2A1-207ENST00000608490 FBLN2P98095 1184 aa15.94■□□□□ 0.14
CSNK2A1-207ENST00000608490 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CSNK2A1-207ENST00000608490 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
CSNK2A1-207ENST00000608490 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
CSNK2A1-207ENST00000608490 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
CSNK2A1-207ENST00000608490 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
CSNK2A1-207ENST00000608490 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
CSNK2A1-207ENST00000608490 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
CSNK2A1-207ENST00000608490 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
CSNK2A1-207ENST00000608490 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
CSNK2A1-207ENST00000608490 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
CSNK2A1-207ENST00000608490 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
CSNK2A1-207ENST00000608490 CLEC11AQ9Y240 323 aa15.57■□□□□ 0.08
CSNK2A1-207ENST00000608490 SPDYE1Q8NFV5 336 aaPredicted RBP15.53■□□□□ 0.08
CSNK2A1-207ENST00000608490 HAX1O00165 279 aa15.48■□□□□ 0.07
CSNK2A1-207ENST00000608490 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
CSNK2A1-207ENST00000608490 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
CSNK2A1-207ENST00000608490 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
CSNK2A1-207ENST00000608490 EVX2Q03828 476 aa15.35■□□□□ 0.05
CSNK2A1-207ENST00000608490 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
CSNK2A1-207ENST00000608490 PRR29P0C7W0 189 aa15.28■□□□□ 0.04
CSNK2A1-207ENST00000608490 C19orf67A6NJJ6 358 aa15.16■□□□□ 0.02
CSNK2A1-207ENST00000608490 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
CSNK2A1-207ENST00000608490 FARP1Q9Y4F1 1045 aaPredicted RBP15.02■□□□□ -0
CSNK2A1-207ENST00000608490 GABBR2O75899 941 aa14.95□□□□□ -0.02
CSNK2A1-207ENST00000608490 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
CSNK2A1-207ENST00000608490 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
CSNK2A1-207ENST00000608490 CD44P16070 742 aaKnown RBP14.93□□□□□ -0.02
CSNK2A1-207ENST00000608490 PROM2Q8N271 834 aa14.73□□□□□ -0.05
CSNK2A1-207ENST00000608490 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
CSNK2A1-207ENST00000608490 MNX1P50219 401 aaPredicted RBP14.67□□□□□ -0.06
CSNK2A1-207ENST00000608490 ZNF579Q8NAF0 562 aaKnown RBP14.67□□□□□ -0.06
CSNK2A1-207ENST00000608490 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
CSNK2A1-207ENST00000608490 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
CSNK2A1-207ENST00000608490 CLCN6P51797 869 aa14.59□□□□□ -0.07
CSNK2A1-207ENST00000608490 PHF12Q96QT6 1004 aa14.57□□□□□ -0.08
CSNK2A1-207ENST00000608490 PAK3O75914 559 aaPredicted RBP14.55□□□□□ -0.08
CSNK2A1-207ENST00000608490 GALR2O43603 387 aaPredicted RBP14.54□□□□□ -0.08
CSNK2A1-207ENST00000608490 LHX8Q68G74 356 aa14.53□□□□□ -0.08
CSNK2A1-207ENST00000608490 DCBLD2Q96PD2 775 aa14.53□□□□□ -0.08
CSNK2A1-207ENST00000608490 MIER1Q8N108 512 aa14.45□□□□□ -0.1
CSNK2A1-207ENST00000608490 FKBP8Q14318 412 aa14.44□□□□□ -0.1
CSNK2A1-207ENST00000608490 TSPYL2Q9H2G4 693 aaPredicted RBP14.42□□□□□ -0.1
CSNK2A1-207ENST00000608490 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
CSNK2A1-207ENST00000608490 MS4A3Q96HJ5 214 aa14.34□□□□□ -0.11
CSNK2A1-207ENST00000608490 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
CSNK2A1-207ENST00000608490 CCDC61Q9Y6R9 512 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms