RNA–Protein interactions for RNA: ENST00000608048.1

LINC01378-204, Transcript of long intergenic non-protein coding RNA 1378, humanhuman

TSL 5

Gene LINC01378, Length 165 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01378-204ENST00000608048 AEBP2Q6ZN18 517 aaPredicted RBP17.37■□□□□ 0.37
LINC01378-204ENST00000608048 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
LINC01378-204ENST00000608048 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
LINC01378-204ENST00000608048 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
LINC01378-204ENST00000608048 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
LINC01378-204ENST00000608048 FOXD1Q16676 465 aa13.67□□□□□ -0.22
LINC01378-204ENST00000608048 ADRA2BP18089 450 aa13.24□□□□□ -0.29
LINC01378-204ENST00000608048 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
LINC01378-204ENST00000608048 PIAS4Q8N2W9 510 aaPredicted RBP12.95□□□□□ -0.34
LINC01378-204ENST00000608048 MSH5O43196 834 aa12.63□□□□□ -0.39
LINC01378-204ENST00000608048 PPP4R3CPQ6ZMV5 832 aa12.32□□□□□ -0.44
LINC01378-204ENST00000608048 SCAF1Q9H7N4 1312 aaKnown RBP12.22□□□□□ -0.45
LINC01378-204ENST00000608048 KCNA4P22459 653 aa12.13□□□□□ -0.47
LINC01378-204ENST00000608048 NCBP3Q53F19 620 aaKnown RBP12.09□□□□□ -0.47
LINC01378-204ENST00000608048 MAPK8IP2Q13387 824 aaPredicted RBP11.98□□□□□ -0.49
LINC01378-204ENST00000608048 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
LINC01378-204ENST00000608048 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
LINC01378-204ENST00000608048 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
LINC01378-204ENST00000608048 RNF216Q9NWF9 866 aaPredicted RBP11.71□□□□□ -0.53
LINC01378-204ENST00000608048 HOXD11P31277 338 aaPredicted RBP11.61□□□□□ -0.55
LINC01378-204ENST00000608048 SLC4A1APQ9BWU0 796 aaKnown RBP11.61□□□□□ -0.55
LINC01378-204ENST00000608048 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
LINC01378-204ENST00000608048 EHMT2Q96KQ7 1210 aa11.39□□□□□ -0.59
LINC01378-204ENST00000608048 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
LINC01378-204ENST00000608048 POTEDQ86YR6 584 aa11.25□□□□□ -0.61
LINC01378-204ENST00000608048 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
LINC01378-204ENST00000608048 FOXD4L1Q9NU39 408 aa11.17□□□□□ -0.62
LINC01378-204ENST00000608048 ZBTB22O15209 634 aa11.13□□□□□ -0.63
LINC01378-204ENST00000608048 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
LINC01378-204ENST00000608048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC01378-204ENST00000608048 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.65
LINC01378-204ENST00000608048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.88□□□□□ -0.67
LINC01378-204ENST00000608048 HNRNPUL2Q1KMD3 747 aaKnown RBP10.88□□□□□ -0.67
LINC01378-204ENST00000608048 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
LINC01378-204ENST00000608048 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
LINC01378-204ENST00000608048 ATXN8OSP0DMR3 200 aa10.8□□□□□ -0.68
LINC01378-204ENST00000608048 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
LINC01378-204ENST00000608048 APLP2Q06481 763 aa10.75□□□□□ -0.69
LINC01378-204ENST00000608048 C1QBPQ07021 282 aaKnown RBP10.71□□□□□ -0.69
LINC01378-204ENST00000608048 ATF5Q9Y2D1 282 aaPredicted RBP10.6□□□□□ -0.71
LINC01378-204ENST00000608048 CAPN15O75808 1086 aa10.55□□□□□ -0.72
LINC01378-204ENST00000608048 SPINK5Q9NQ38 1064 aaPredicted RBP10.54□□□□□ -0.72
LINC01378-204ENST00000608048 ZNF219Q9P2Y4 722 aaPredicted RBP10.53□□□□□ -0.72
LINC01378-204ENST00000608048 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
LINC01378-204ENST00000608048 CACNB1Q02641 598 aaPredicted RBP10.47□□□□□ -0.73
LINC01378-204ENST00000608048 POLA2Q14181 598 aa10.38□□□□□ -0.75
LINC01378-204ENST00000608048 ABCB7O75027 752 aa10.32□□□□□ -0.76
LINC01378-204ENST00000608048 DSG3P32926 999 aa10.31□□□□□ -0.76
LINC01378-204ENST00000608048 FBLN2P98095 1184 aa10.25□□□□□ -0.77
LINC01378-204ENST00000608048 ZBTB12Q9Y330 459 aaPredicted RBP10.24□□□□□ -0.77
LINC01378-204ENST00000608048 MKRN4PQ13434 485 aaPredicted RBP10.15□□□□□ -0.78
LINC01378-204ENST00000608048 FKBP8Q14318 412 aa10.14□□□□□ -0.79
LINC01378-204ENST00000608048 SPDYE4A6NLX3 237 aa10.04□□□□□ -0.8
LINC01378-204ENST00000608048 OSCARQ8IYS5 282 aa9.98□□□□□ -0.81
LINC01378-204ENST00000608048 SPDYE2BA6NHP3 402 aa9.95□□□□□ -0.82
LINC01378-204ENST00000608048 SPDYE6P0CI01 402 aa9.95□□□□□ -0.82
LINC01378-204ENST00000608048 SPDYE2Q495Y8 402 aa9.95□□□□□ -0.82
LINC01378-204ENST00000608048 ZNF692Q9BU19 519 aaPredicted RBP9.94□□□□□ -0.82
LINC01378-204ENST00000608048 RBM42Q9BTD8 480 aaKnown RBP9.88□□□□□ -0.83
LINC01378-204ENST00000608048 SSUH2Q9Y2M2 353 aa9.85□□□□□ -0.83
LINC01378-204ENST00000608048 PROM2Q8N271 834 aa9.84□□□□□ -0.83
LINC01378-204ENST00000608048 FBXO3Q9UK99 471 aa9.82□□□□□ -0.84
LINC01378-204ENST00000608048 PABPN1Q86U42 306 aaKnown RBP eCLIP9.79□□□□□ -0.84
LINC01378-204ENST00000608048 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
LINC01378-204ENST00000608048 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
LINC01378-204ENST00000608048 SPDYE1Q8NFV5 336 aaPredicted RBP9.65□□□□□ -0.86
LINC01378-204ENST00000608048 REM2Q8IYK8 340 aaPredicted RBP9.64□□□□□ -0.87
LINC01378-204ENST00000608048 VASPP50552 380 aaPredicted RBP9.61□□□□□ -0.87
LINC01378-204ENST00000608048 CLEC11AQ9Y240 323 aa9.59□□□□□ -0.87
LINC01378-204ENST00000608048 MIER1Q8N108 512 aa9.55□□□□□ -0.88
LINC01378-204ENST00000608048 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
LINC01378-204ENST00000608048 PLCD3Q8N3E9 789 aa9.54□□□□□ -0.88
LINC01378-204ENST00000608048 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
LINC01378-204ENST00000608048 PITPNM1O00562 1244 aa9.51□□□□□ -0.89
LINC01378-204ENST00000608048 IFNLR1Q8IU57 520 aaPredicted RBP9.48□□□□□ -0.89
LINC01378-204ENST00000608048 KLHL34Q8N239 644 aa9.48□□□□□ -0.89
LINC01378-204ENST00000608048 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
LINC01378-204ENST00000608048 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.9
LINC01378-204ENST00000608048 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
LINC01378-204ENST00000608048 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
LINC01378-204ENST00000608048 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
LINC01378-204ENST00000608048 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
LINC01378-204ENST00000608048 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC01378-204ENST00000608048 NPM1P06748 294 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC01378-204ENST00000608048 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
LINC01378-204ENST00000608048 CHADLQ6NUI6 762 aa9.3□□□□□ -0.92
LINC01378-204ENST00000608048 MNX1P50219 401 aaPredicted RBP9.28□□□□□ -0.92
LINC01378-204ENST00000608048 PIP4P2Q8N4L2 257 aa9.27□□□□□ -0.93
LINC01378-204ENST00000608048 FARP1Q9Y4F1 1045 aaPredicted RBP9.25□□□□□ -0.93
LINC01378-204ENST00000608048 NUBP1P53384 320 aa9.23□□□□□ -0.93
LINC01378-204ENST00000608048 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
LINC01378-204ENST00000608048 GSE1Q14687 1217 aa9.21□□□□□ -0.94
LINC01378-204ENST00000608048 DCAF8Q5TAQ9 597 aa9.21□□□□□ -0.94
LINC01378-204ENST00000608048 FAM212AQ96EL1 285 aa9.2□□□□□ -0.94
LINC01378-204ENST00000608048 PKD2Q13563 968 aa9.19□□□□□ -0.94
LINC01378-204ENST00000608048 ECM2O94769 699 aaPredicted RBP9.16□□□□□ -0.94
LINC01378-204ENST00000608048 TRIM41Q8WV44 630 aa9.16□□□□□ -0.94
LINC01378-204ENST00000608048 RASEFQ8IZ41 740 aa9.15□□□□□ -0.94
LINC01378-204ENST00000608048 PAK3O75914 559 aaPredicted RBP9.12□□□□□ -0.95
LINC01378-204ENST00000608048 TSPYL2Q9H2G4 693 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms