RNA–Protein interactions for RNA: ENST00000607701.1

SLC44A1-207, Transcript of solute carrier family 44 member 1, humanhuman

TSL 4

Gene SLC44A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-207ENST00000607701 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
SLC44A1-207ENST00000607701 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
SLC44A1-207ENST00000607701 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
SLC44A1-207ENST00000607701 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
SLC44A1-207ENST00000607701 FOXD1Q16676 465 aa19.37■□□□□ 0.69
SLC44A1-207ENST00000607701 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
SLC44A1-207ENST00000607701 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
SLC44A1-207ENST00000607701 ADRA2BP18089 450 aa18.44■□□□□ 0.54
SLC44A1-207ENST00000607701 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
SLC44A1-207ENST00000607701 MSH5O43196 834 aa17.9■□□□□ 0.46
SLC44A1-207ENST00000607701 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
SLC44A1-207ENST00000607701 SCAF1Q9H7N4 1312 aaKnown RBP16.84■□□□□ 0.29
SLC44A1-207ENST00000607701 MAPK8IP2Q13387 824 aaPredicted RBP16.8■□□□□ 0.28
SLC44A1-207ENST00000607701 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
SLC44A1-207ENST00000607701 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
SLC44A1-207ENST00000607701 CNKSR2Q8WXI2 1034 aa16.44■□□□□ 0.22
SLC44A1-207ENST00000607701 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
SLC44A1-207ENST00000607701 KCNA4P22459 653 aa16.25■□□□□ 0.19
SLC44A1-207ENST00000607701 HOXD11P31277 338 aaPredicted RBP16.17■□□□□ 0.18
SLC44A1-207ENST00000607701 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
SLC44A1-207ENST00000607701 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
SLC44A1-207ENST00000607701 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
SLC44A1-207ENST00000607701 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
SLC44A1-207ENST00000607701 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
SLC44A1-207ENST00000607701 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLC44A1-207ENST00000607701 RNF39Q9H2S5 420 aa15.35■□□□□ 0.05
SLC44A1-207ENST00000607701 SLC4A2P04920 1241 aa15.3■□□□□ 0.04
SLC44A1-207ENST00000607701 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
SLC44A1-207ENST00000607701 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
SLC44A1-207ENST00000607701 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
SLC44A1-207ENST00000607701 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
SLC44A1-207ENST00000607701 ZBTB22O15209 634 aa14.97□□□□□ -0.01
SLC44A1-207ENST00000607701 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
SLC44A1-207ENST00000607701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
SLC44A1-207ENST00000607701 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
SLC44A1-207ENST00000607701 SAMD1Q6SPF0 538 aaPredicted RBP14.78□□□□□ -0.04
SLC44A1-207ENST00000607701 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
SLC44A1-207ENST00000607701 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
SLC44A1-207ENST00000607701 APLP2Q06481 763 aa14.71□□□□□ -0.05
SLC44A1-207ENST00000607701 CAPN15O75808 1086 aa14.69□□□□□ -0.06
SLC44A1-207ENST00000607701 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
SLC44A1-207ENST00000607701 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
SLC44A1-207ENST00000607701 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
SLC44A1-207ENST00000607701 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
SLC44A1-207ENST00000607701 DSG3P32926 999 aa14.53□□□□□ -0.08
SLC44A1-207ENST00000607701 ATXN8OSP0DMR3 200 aa14.5□□□□□ -0.09
SLC44A1-207ENST00000607701 ABCB7O75027 752 aa14.41□□□□□ -0.1
SLC44A1-207ENST00000607701 POLA2Q14181 598 aa14.32□□□□□ -0.12
SLC44A1-207ENST00000607701 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
SLC44A1-207ENST00000607701 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
SLC44A1-207ENST00000607701 FBLN2P98095 1184 aa13.89□□□□□ -0.19
SLC44A1-207ENST00000607701 OSCARQ8IYS5 282 aa13.82□□□□□ -0.2
SLC44A1-207ENST00000607701 RBM42Q9BTD8 480 aaKnown RBP13.82□□□□□ -0.2
SLC44A1-207ENST00000607701 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
SLC44A1-207ENST00000607701 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
SLC44A1-207ENST00000607701 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
SLC44A1-207ENST00000607701 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
SLC44A1-207ENST00000607701 ZNF692Q9BU19 519 aaPredicted RBP13.57□□□□□ -0.24
SLC44A1-207ENST00000607701 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
SLC44A1-207ENST00000607701 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
SLC44A1-207ENST00000607701 SPDYE4A6NLX3 237 aa13.46□□□□□ -0.25
SLC44A1-207ENST00000607701 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC44A1-207ENST00000607701 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
SLC44A1-207ENST00000607701 CHRDL2Q6WN34 429 aa13.35□□□□□ -0.27
SLC44A1-207ENST00000607701 SPDYE1Q8NFV5 336 aaPredicted RBP13.3□□□□□ -0.28
SLC44A1-207ENST00000607701 FKBP8Q14318 412 aa13.26□□□□□ -0.29
SLC44A1-207ENST00000607701 PROM2Q8N271 834 aa13.24□□□□□ -0.29
SLC44A1-207ENST00000607701 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
SLC44A1-207ENST00000607701 POTEHQ6S545 545 aa13.16□□□□□ -0.3
SLC44A1-207ENST00000607701 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
SLC44A1-207ENST00000607701 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
SLC44A1-207ENST00000607701 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
SLC44A1-207ENST00000607701 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
SLC44A1-207ENST00000607701 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
SLC44A1-207ENST00000607701 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
SLC44A1-207ENST00000607701 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
SLC44A1-207ENST00000607701 FBXO3Q9UK99 471 aa12.84□□□□□ -0.35
SLC44A1-207ENST00000607701 FARP1Q9Y4F1 1045 aaPredicted RBP12.82□□□□□ -0.36
SLC44A1-207ENST00000607701 MIER1Q8N108 512 aa12.78□□□□□ -0.36
SLC44A1-207ENST00000607701 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
SLC44A1-207ENST00000607701 HAX1O00165 279 aa12.76□□□□□ -0.37
SLC44A1-207ENST00000607701 PLCD3Q8N3E9 789 aa12.72□□□□□ -0.37
SLC44A1-207ENST00000607701 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
SLC44A1-207ENST00000607701 PLEKHG5O94827 1062 aa12.69□□□□□ -0.38
SLC44A1-207ENST00000607701 VASPP50552 380 aaPredicted RBP12.69□□□□□ -0.38
SLC44A1-207ENST00000607701 EVX2Q03828 476 aa12.68□□□□□ -0.38
SLC44A1-207ENST00000607701 NPM1P06748 294 aaKnown RBP eCLIP12.66□□□□□ -0.38
SLC44A1-207ENST00000607701 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
SLC44A1-207ENST00000607701 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
SLC44A1-207ENST00000607701 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
SLC44A1-207ENST00000607701 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.41
SLC44A1-207ENST00000607701 NUBP1P53384 320 aa12.5□□□□□ -0.41
SLC44A1-207ENST00000607701 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
SLC44A1-207ENST00000607701 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
SLC44A1-207ENST00000607701 RASEFQ8IZ41 740 aa12.49□□□□□ -0.41
SLC44A1-207ENST00000607701 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
SLC44A1-207ENST00000607701 ZNF579Q8NAF0 562 aaKnown RBP12.45□□□□□ -0.42
SLC44A1-207ENST00000607701 TSPYL2Q9H2G4 693 aaPredicted RBP12.45□□□□□ -0.42
SLC44A1-207ENST00000607701 GABBR2O75899 941 aa12.4□□□□□ -0.42
SLC44A1-207ENST00000607701 PHF12Q96QT6 1004 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms